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1ZWU
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BU of 1zwu by Molmil
30 NMR structures of AcAMP2-like peptide with non natural beta-(2-naphthyl)-alanine residue.
Descriptor: AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2 (ACMP2)
Authors:Chavez, M.I, Andreu, C, Vidal, P, Freire, F, Aboitiz, N, Groves, P, Asensio, J.L, Asensio, G, Muraki, M, Canada, F.J, Jimenez-Barbero, J.
Deposit date:2005-06-06
Release date:2005-12-06
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:On the Importance of Carbohydrate-Aromatic Interactions for the Molecular Recognition of Oligosaccharides by Proteins: NMR Studies of the Structure and Binding Affinity of AcAMP2-like Peptides with Non-Natural Naphthyl and Fluoroaromatic Residues.
Chemistry, 11, 2005
3D5F
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BU of 3d5f by Molmil
Crystal Structure of PPAR-delta complex
Descriptor: Peroxisome proliferator-activated receptor delta, {4-[3-(4-acetyl-3-hydroxy-2-propylphenoxy)propoxy]phenoxy}acetic acid
Authors:Amano, Y.
Deposit date:2008-05-16
Release date:2008-06-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PPAR-Delta Activation Contributes to Neuroprotectio Against Thapsigargin-Induced SH-SY5Y Cell Death
to be published
3VND
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BU of 3vnd by Molmil
Crystal structure of tryptophan synthase alpha-subunit from the psychrophile Shewanella frigidimarina K14-2
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, SULFATE ION, Tryptophan synthase alpha chain
Authors:Mitsuya, D, Tanaka, S, Matsumura, H, Takano, K, Urano, N, Ishida, M.
Deposit date:2012-01-12
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Strategy for cold adaptation of the tryptophan synthase alpha subunit from the psychrophile Shewanella frigidimarina K14-2: crystal structure and physicochemical properties
J.Biochem., 155, 2014
2Z6C
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BU of 2z6c by Molmil
Crystal structure of LOV1 domain of phototropin1 from Arabidopsis thaliana
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-1
Authors:Nakasako, M, Matsuoka, D, Tokutomi, S.
Deposit date:2007-07-29
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the LOV1 dimerization of Arabidopsis phototropins 1 and 2
J.Mol.Biol., 381, 2008
2Z6D
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BU of 2z6d by Molmil
Crystal structure of LOV1 domain of phototropin2 from Arabidopsis thaliana
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Nakasako, M, Matsuoka, D, Tokutomi, S.
Deposit date:2007-07-29
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the LOV1 dimerization of Arabidopsis phototropins 1 and 2
J.Mol.Biol., 381, 2008
2Z8Z
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BU of 2z8z by Molmil
Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase
Descriptor: CALCIUM ION, Lipase, PLATINUM (II) ION, ...
Authors:Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2007-09-13
Release date:2007-10-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation
FEBS Lett., 581, 2007
3W5E
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BU of 3w5e by Molmil
Crystal structure of phosphodiesterase 4B in complex with compound 31e
Descriptor: CALCIUM ION, N-tert-butyl-2-{4-[(5,5-dioxido-2-phenyl-7,8-dihydro-6H-thiopyrano[3,2-d]pyrimidin-4-yl)amino]phenyl}acetamide, ZINC ION, ...
Authors:Takahashi, M, Hanzawa, H.
Deposit date:2013-01-28
Release date:2013-05-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of the fused bicyclic 4-amino-2-phenylpyrimidine derivatives as novel and potent PDE4 inhibitors
Bioorg.Med.Chem.Lett., 23, 2013
3AA9
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BU of 3aa9 by Molmil
Crystal Structure Analysis of the Mutant CutA1 (E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
3WIG
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BU of 3wig by Molmil
Human MEK1 kinase in complex with CH5126766 and MgAMP-PNP
Descriptor: CHLORIDE ION, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
Authors:Lukacs, C.M, Janson, C, Schuck, V.
Deposit date:2013-09-12
Release date:2014-06-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Disruption of CRAF-Mediated MEK Activation Is Required for Effective MEK Inhibition in KRAS Mutant Tumors
Cancer Cell, 25, 2014
3WD9
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BU of 3wd9 by Molmil
Crystal structure of phosphodiesterase 4B in complex with compound 10f
Descriptor: 4-[(4-{2-[(2,2-dimethylpropyl)amino]-2-oxoethyl}phenyl)amino]-2-phenylpyrimidine-5-carboxamide, CALCIUM ION, ZINC ION, ...
Authors:Takahashi, M, Hanzawa, H.
Deposit date:2013-06-11
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Synthesis and biological evaluation of 5-carbamoyl-2-phenylpyrimidine derivatives as novel and potent PDE4 inhibitors
Bioorg.Med.Chem., 21, 2013
3AA8
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BU of 3aa8 by Molmil
Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
2Z8X
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BU of 2z8x by Molmil
Crystal structure of extracellular lipase from Pseudomonas sp. MIS38
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2007-09-11
Release date:2007-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation
FEBS Lett., 581, 2007
2ZOM
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BU of 2zom by Molmil
Crystal structure of CutA1 from Oryza sativa
Descriptor: GLYCEROL, Protein CutA, chloroplast, ...
Authors:Kezuka, Y, Bagautdinov, B, Katoh, S, Ohtake, Y, Yutani, K, Nonaka, T, Katoh, E.
Deposit date:2008-05-23
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Crystal structure of CutA1 from Oryza sativa
To be Published
3AH6
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BU of 3ah6 by Molmil
Remarkable improvement of the heat stability of CutA1 from E.coli by rational protein designing
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2010-04-15
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
3BPP
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BU of 3bpp by Molmil
1510-N membrane protease K138A mutant specific for a stomatin homolog from Pyrococcus horikoshii
Descriptor: 1510-N membrane protease
Authors:Yokoyama, H, Hamamatsu, S, Fujii, S, Matsui, I.
Deposit date:2007-12-19
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel dimer structure of a membrane-bound protease with a catalytic Ser-Lys dyad and its linkage to stomatin
J.SYNCHROTRON RADIAT., 15, 2008
3BK6
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BU of 3bk6 by Molmil
Crystal structure of a core domain of stomatin from Pyrococcus horikoshii
Descriptor: PH stomatin
Authors:Yokoyama, H, Fujii, S, Matsui, I.
Deposit date:2007-12-05
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a core domain of stomatin from Pyrococcus horikoshii Illustrates a novel trimeric and coiled-coil fold
J.Mol.Biol., 376, 2008
3VI0
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BU of 3vi0 by Molmil
Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3VW9
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BU of 3vw9 by Molmil
Human Glyoxalase I with an N-hydroxypyridone inhibitor
Descriptor: 1-hydroxy-6-[1-(3-methoxypropyl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-4-phenylpyridin-2(1H)-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lactoylglutathione lyase, ...
Authors:Fukami, T.A, Irie, M, Matsuura, T.
Deposit date:2012-08-10
Release date:2012-12-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Design and evaluation of azaindole-substituted N-hydroxypyridones as glyoxalase I inhibitors
Bioorg.Med.Chem.Lett., 22, 2012
3VVK
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BU of 3vvk by Molmil
An M-like Reaction State of the azide-bound purple form of pharaonis halorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, AZIDE ION, BACTERIORUBERIN, ...
Authors:Kouyama, T, Nakanishi, T.
Deposit date:2012-07-26
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Large deformation of helix F during the photoreaction cycle of Pharaonis halorhodopsin in complex with azide
Biophys.J., 104, 2013
3W0T
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BU of 3w0t by Molmil
Human Glyoxalase I with an N-hydroxypyridone derivative inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lactoylglutathione lyase, N-[3-(1-hydroxy-6-oxo-4-phenyl-1,6-dihydropyridin-2-yl)phenyl]methanesulfonamide, ...
Authors:Fukami, T.A, Irie, M, Matsuura, T.
Deposit date:2012-11-02
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.351 Å)
Cite:N-Hydroxypyridone-based glyoxalase I inhibitors mimicking binding interactions of the substrate
To be Published
3VHZ
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BU of 3vhz by Molmil
Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ...
Authors:Kouyama, T, Zhang, J.
Deposit date:2011-09-13
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin
Proteins, 80, 2012
3W0U
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BU of 3w0u by Molmil
human Glyoxalase I with an N-hydroxypyridone inhibitor
Descriptor: Lactoylglutathione lyase, N-[3-(1-Hydroxy-6-oxo-4-phenyl-1,6-dihydro-pyridin-2-yl)-5-methanesulfonylamino-phenyl]-methanesulfonamide, ZINC ION
Authors:Fukami, T.A, Irie, M, Matsuura, T.
Deposit date:2012-11-02
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:N-Hydroxypyridone-based glyoxalase I inhibitors mimicking binding interactions of the substrate
to be published
2ZOI
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BU of 2zoi by Molmil
Neutron Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Yamaguchi, S.
Deposit date:2008-05-21
Release date:2009-03-24
Last modified:2023-11-01
Method:NEUTRON DIFFRACTION (1.5 Å)
Cite:Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
3A1R
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BU of 3a1r by Molmil
Neutron crystal structure analysis of bovine pancreatic ribonuclease A
Descriptor: Ribonuclease pancreatic
Authors:Yagi, D, Tanaka, I, Niimura, N.
Deposit date:2009-04-21
Release date:2009-09-01
Last modified:2023-11-01
Method:NEUTRON DIFFRACTION (1.7 Å)
Cite:A neutron crystallographic analysis of phosphate-free ribonuclease A at 1.7 A resolution
Acta Crystallogr.,Sect.D, 65, 2009
3A22
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BU of 3a22 by Molmil
Crystal Structure of beta-L-Arabinopyranosidase complexed with L-arabinose
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Fujimoto, Z, Ichinose, H, Kaneko, S.
Deposit date:2009-04-27
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27.
J.Biol.Chem., 284, 2009

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