Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8ICM
DownloadVisualize
BU of 8icm by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR)
Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1996-01-04
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry, 35, 1996
8ICR
DownloadVisualize
BU of 8icr by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR)
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1996-01-04
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta
Biochemistry, 35, 1996
8ICJ
DownloadVisualize
BU of 8icj by Molmil
DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MGCL2
Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1996-04-19
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta
Biochemistry, 35, 1996
8ICS
DownloadVisualize
BU of 8ics by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR)
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1995-12-15
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry, 35, 1996
8ICQ
DownloadVisualize
BU of 8icq by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) AND MNCL2 (0.5 MILLIMOLAR)
Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1996-01-04
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry, 35, 1996
8ICN
DownloadVisualize
BU of 8icn by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1995-12-15
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry, 35, 1996
8ICP
DownloadVisualize
BU of 8icp by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR)
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1995-12-15
Release date:1996-11-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry, 35, 1996
6LEK
DownloadVisualize
BU of 6lek by Molmil
Tertiary structure of Barnacle cement protein MrCP20
Descriptor: Cement protein-20k
Authors:Mohanram, H.
Deposit date:2019-11-25
Release date:2020-01-15
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of Megabalanus rosa Cement Protein 20 revealed by multi-dimensional NMR and molecular dynamics simulations.
Philos.Trans.R.Soc.Lond.B Biol.Sci., 374, 2019
2NAF
DownloadVisualize
BU of 2naf by Molmil
Solution structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Descriptor: Peptidyl-tRNA hydrolase
Authors:Yadav, R, Pathak, P, Fatma, F, Kabra, A, Pulavarti, S, Jain, A, Kumar, A, Shukla, V, Arora, A.
Deposit date:2015-12-23
Release date:2017-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of peptidyl-tRNA hydrolase from Mycobacterium smegmatis by NMR spectroscopy.
Biochim.Biophys.Acta, 1864, 2016
2GLZ
DownloadVisualize
BU of 2glz by Molmil
Crystal structure of a formylmethanofuran dehydrogenase subunit e-like protein (dhaf_2992) from desulfitobacterium hafniense dcb-2 at 1.45 A resolution
Descriptor: 1,2-ETHANEDIOL, NICKEL (II) ION, ZINC ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-04-05
Release date:2006-04-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallogr.,Sect.F, 66, 2010
2QTP
DownloadVisualize
BU of 2qtp by Molmil
Crystal structure of a duf1185 family protein (spo0826) from silicibacter pomeroyi dss-3 at 2.10 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2GVI
DownloadVisualize
BU of 2gvi by Molmil
Crystal structure of a putative formylmethanofuran dehydrogenase subunit e (ta1109) from thermoplasma acidophilum at 1.87 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, UNKNOWN LIGAND, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-02
Release date:2006-06-13
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallogr.,Sect.F, 66, 2010
2ETS
DownloadVisualize
BU of 2ets by Molmil
CRYSTAL STRUCTURE OF A BACTERIAL DOMAIN OF UNKNOWN FUNCTION FROM DUF1798 FAMILY (MW1337) FROM STAPHYLOCOCCUS AUREUS SUBSP. AUREUS AT 2.25 A RESOLUTION
Descriptor: CHLORIDE ION, PHOSPHATE ION, hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-10-27
Release date:2005-11-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold.
Proteins, 71, 2008
2G36
DownloadVisualize
BU of 2g36 by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS) (tm0492) from THERMOTOGA MARITIMA at 2.50 A resolution
Descriptor: IRON/SULFUR CLUSTER, TRYPTOPHAN, Tryptophanyl-tRNA synthetase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-02-17
Release date:2006-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster.
Acta Crystallogr.,Sect.F, 66, 2010
2FG0
DownloadVisualize
BU of 2fg0 by Molmil
Crystal structure of a putative gamma-d-glutamyl-l-diamino acid endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.79 A resolution
Descriptor: COG0791: Cell wall-associated hydrolases (invasion-associated proteins), GLYCEROL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-12-20
Release date:2006-01-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase.
Structure, 17, 2009
2EVR
DownloadVisualize
BU of 2evr by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE GAMMA-D-GLUTAMYL-L-DIAMINO ACID ENDOPEPTIDASE (NPUN_R0659) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.60 A RESOLUTION
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, COG0791: Cell wall-associated hydrolases (invasion-associated proteins), ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-10-31
Release date:2005-11-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase.
Structure, 17, 2009
9F00
DownloadVisualize
BU of 9f00 by Molmil
Complex between D-SH2 domain of ABL with monobody DAM27
Descriptor: monobody DAM27, synthetic D-SH2 domain
Authors:Essen, L.-O, Hantschel, O, Schmidt, N, Korf, L.
Deposit date:2024-04-14
Release date:2024-12-25
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Development of mirror-image monobodies targeting the oncogenic BCR::ABL1 kinase.
Nat Commun, 15, 2024
9F01
DownloadVisualize
BU of 9f01 by Molmil
Complex between D-SH2 domain of ABL with monobody 'DAM21
Descriptor: CHLORIDE ION, nanobody DAM21.3, synthetic D-SH2 domain NS1-10
Authors:Essen, L.-O, Hantschel, O, Schmidt, N, Korf, L.
Deposit date:2024-04-14
Release date:2024-12-25
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Development of mirror-image monobodies targeting the oncogenic BCR::ABL1 kinase.
Nat Commun, 15, 2024
2GHR
DownloadVisualize
BU of 2ghr by Molmil
Crystal structure of homoserine o-succinyltransferase (NP_981826.1) from Bacillus cereus ATCC 10987 at 2.40 A resolution
Descriptor: Homoserine O-succinyltransferase, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-03-27
Release date:2006-04-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution
Proteins, 68, 2007
2HBW
DownloadVisualize
BU of 2hbw by Molmil
Crystal structure of a putative endopeptidase (ava_3396) from anabaena variabilis atcc 29413 at 1.05 A resolution
Descriptor: ACETATE ION, NLP/P60 protein, UNKNOWN LIGAND
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-06-14
Release date:2006-08-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase.
Structure, 17, 2009
2GVK
DownloadVisualize
BU of 2gvk by Molmil
Crystal structure of a dye-decolorizing peroxidase (DyP) from Bacteroides thetaiotaomicron VPI-5482 at 1.6 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-02
Release date:2006-05-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif.
Proteins, 69, 2007
2H1T
DownloadVisualize
BU of 2h1t by Molmil
Crystal structure of a duf1089 family protein (pa1994) from pseudomonas aeruginosa at 1.80 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-16
Release date:2006-05-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2HAG
DownloadVisualize
BU of 2hag by Molmil
Crystal structure of a putative dyp-type peroxidase protein (so_0740) from shewanella oneidensis at 2.75 A resolution
Descriptor: Melanin biosynthesis protein TyrA, putative
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-06-12
Release date:2006-08-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif.
Proteins, 69, 2007
2HUJ
DownloadVisualize
BU of 2huj by Molmil
Crystal structure of a protein of uknown function (NP_471338.1) from Listeria innocua at 1.74 A resolution
Descriptor: Lin2004 protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-07-26
Release date:2006-08-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold.
Proteins, 71, 2008
2OOC
DownloadVisualize
BU of 2ooc by Molmil
Crystal structure of Histidine Phosphotransferase ShpA (NP_419930.1) from Caulobacter crescentus at 1.52 A resolution
Descriptor: GLYCEROL, Histidine phosphotransferase, TETRAETHYLENE GLYCOL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-01-25
Release date:2007-02-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal structure of histidine phosphotransfer protein ShpA, an essential regulator of stalk biogenesis in Caulobacter crescentus.
J.Mol.Biol., 390, 2009

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon