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5V7W
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BU of 5v7w by Molmil
Crystal structure of human PARP14 bound to 2-{[(1-methylpiperidin-4-yl)methyl]amino}-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one inhibitor
Descriptor: 2-{[(1-methylpiperidin-4-yl)methyl]amino}-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one, Poly [ADP-ribose] polymerase 14
Authors:saikatendu, k.s, Hirozane, M.
Deposit date:2017-03-20
Release date:2017-05-10
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Identification of PARP14 inhibitors using novel methods for detecting auto-ribosylation.
Biochem. Biophys. Res. Commun., 486, 2017
2DTM
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BU of 2dtm by Molmil
Thermodynamic and structural analyses of hydrolytic mechanism by catalytic antibodies
Descriptor: IMMUNOGLOBULIN 6D9
Authors:Oda, M, Ito, N, Tsumuraya, T, Suzuki, K, Fujii, I.
Deposit date:2006-07-13
Release date:2007-05-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
6JSA
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BU of 6jsa by Molmil
Crystal structure of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JS9
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BU of 6js9 by Molmil
Crystal structure of the N-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
3WW3
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BU of 3ww3 by Molmil
X-ray structures of Cellulomonas parahominis L-ribose isomerase with no ligand
Descriptor: L-ribose isomerase, MANGANESE (II) ION
Authors:Terami, Y, Yoshida, H, Takata, G, Kamitori, S.
Deposit date:2014-06-13
Release date:2015-04-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
3WW1
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BU of 3ww1 by Molmil
X-ray structure of Cellulomonas parahominis L-ribose isomerase with L-ribose
Descriptor: L-ribose, L-ribose isomerase, MANGANESE (II) ION, ...
Authors:Terami, Y, Yoshida, H, Takata, G, Kamitori, S.
Deposit date:2014-06-13
Release date:2015-04-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway.
Appl.Microbiol.Biotechnol., 99, 2015
8JQ5
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BU of 8jq5 by Molmil
Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allulose
Descriptor: D-psicose, L-rhamnose isomerase, MANGANESE (II) ION, ...
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ4
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BU of 8jq4 by Molmil
Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with L-rhamnose
Descriptor: L-rhamnose isomerase, MANGANESE (II) ION, alpha-L-rhamnopyranose, ...
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ6
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BU of 8jq6 by Molmil
Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allose
Descriptor: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-allopyranose, ...
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ3
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BU of 8jq3 by Molmil
Crystal structure of L-rhamnose isomerase from Lactobacillus rhamnosus
Descriptor: L-rhamnose isomerase, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
5EXV
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BU of 5exv by Molmil
Crystal structure of heme binding protein HutX from Vibrio cholerae
Descriptor: Hemin-degrading HemS.ChuX domain protein
Authors:Sekine, Y, Tanaka, Y, Uchida, T.
Deposit date:2015-11-24
Release date:2016-07-13
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Cytoplasmic Heme-Binding Protein (HutX) from Vibrio cholerae Is an Intracellular Heme Transport Protein for the Heme-Degrading Enzyme, HutZ
Biochemistry, 55, 2016
7WRR
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BU of 7wrr by Molmil
X-ray structure of Thermus thermophilus HB8 transketorase in complex with TPP and MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, THIAMINE DIPHOSPHATE, ...
Authors:Kamitori, S, Yoshihara, A.
Deposit date:2022-01-27
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
7WRT
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BU of 7wrt by Molmil
X-ray structure ofThermus thermophilus HB8 transketorase demonstrate in complex with TPP and D-erythrose-4-phosphate
Descriptor: CALCIUM ION, ERYTHOSE-4-PHOSPHATE, THIAMINE DIPHOSPHATE, ...
Authors:Kamitori, S, Yoshihara, A.
Deposit date:2022-01-27
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
1J09
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BU of 1j09 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP and Glu
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMIC ACID, Glutamyl-tRNA synthetase, ...
Authors:Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-11-12
Release date:2003-02-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
6JSC
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BU of 6jsc by Molmil
Crystal structure of the H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JSD
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BU of 6jsd by Molmil
Crystal structure of the domain-swapped dimer H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, ISOPROPYL ALCOHOL
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JSB
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BU of 6jsb by Molmil
Crystal structure of Heme binding protein HtaB from Corynebacterium glutamicum
Descriptor: CALCIUM ION, Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
5B4Z
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BU of 5b4z by Molmil
Crystal structure of heme binding protein HmuT H141A mutant
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5DE0
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BU of 5de0 by Molmil
Dye-decolorizing protein from V. cholerae
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Uchida, T, Sasaki, M, Tanaka, Y, Yao, M.
Deposit date:2015-08-25
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A Dye-Decolorizing Peroxidase from Vibrio cholerae.
Biochemistry, 54, 2015
5B51
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BU of 5b51 by Molmil
Crystal structure of heme binding protein HmuT R242A mutant
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B50
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BU of 5b50 by Molmil
Crystal structure of heme binding protein HmuT Y240A
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
2YJB
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BU of 2yjb by Molmil
CATHEPSIN L WITH A NITRILE INHIBITOR
Descriptor: (2S,4R)-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-[4-(trifluoromethyl)phenyl]cyclopropyl]carbonyl-pyrrolidine-2-carboxamide, CATHEPSIN L1, GLYCEROL
Authors:Banner, D.W, Benz, J.M, Haap, W.
Deposit date:2011-05-19
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Halogen Bonding at the Active Sites of Human Cathepsin L and Mek1 Kinase: Efficient Interactions in Different Environments.
Chemmedchem, 6, 2011
2D5K
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BU of 2d5k by Molmil
Crystal structure of Dps from Staphylococcus aureus
Descriptor: Dps family protein, GLYCEROL
Authors:Tanaka, Y, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2005-11-02
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Nucleoid compaction by MrgA(Asp56Ala/Glu60Ala) does not contribute to staphylococcal cell survival against oxidative stress and phagocytic killing by macrophages
FEMS Microbiol. Lett., 360, 2014
2YJC
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BU of 2yjc by Molmil
CATHEPSIN L WITH A NITRILE INHIBITOR
Descriptor: (2S,4R)-1-[1-(4-chlorophenyl)cyclopropyl]carbonyl-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide, CATHEPSIN L1
Authors:Banner, D.W, Benz, J.M, Haap, W.
Deposit date:2011-05-19
Release date:2011-11-23
Last modified:2011-11-30
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Halogen Bonding at the Active Sites of Human Cathepsin L and Mek1 Kinase: Efficient Interactions in Different Environments.
Chemmedchem, 6, 2011
2YJ9
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BU of 2yj9 by Molmil
CATHEPSIN L WITH A NITRILE INHIBITOR
Descriptor: (2S,4R)-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-[4-(trifluoromethyl)phenyl]cyclopropyl]carbonyl-pyrrolidine-2-carboxamide, CATHEPSIN L1, GLYCEROL
Authors:Banner, D.W, Benz, J.M, Haap, W.
Deposit date:2011-05-19
Release date:2011-11-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Halogen Bonding at the Active Sites of Human Cathepsin L and Mek1 Kinase: Efficient Interactions in Different Environments.
Chemmedchem, 6, 2011

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