Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3J7I
DownloadVisualize
BU of 3j7i by Molmil
Structure of alpha- and beta- tubulin in GMPCPP-microtubules
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tubulin alpha-1A chain, ...
著者Yajima, H, Ogura, T, Nitta, R, Okada, Y, Sato, C, Hirokawa, N.
登録日2014-07-01
公開日2014-12-10
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Conformational changes in tubulin in GMPCPP and GDP-taxol microtubules observed by cryoelectron microscopy
J.Cell Biol., 198, 2012
8JYM
DownloadVisualize
BU of 8jym by Molmil
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-07-03
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYK
DownloadVisualize
BU of 8jyk by Molmil
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-07-03
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYP
DownloadVisualize
BU of 8jyp by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-07-03
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYN
DownloadVisualize
BU of 8jyn by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-07-03
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYO
DownloadVisualize
BU of 8jyo by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-07-03
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
5GSY
DownloadVisualize
BU of 5gsy by Molmil
Kinesin-8 motor, KIF19A, in the nucleotide-free state complexed with GDP-taxol microtubule
分子名称: Kinesin-like protein KIF19
著者Morikawa, M, Nitta, R, Yajima, H, Shigematsu, H, Kikkawa, M, Hirokawa, N.
登録日2016-08-17
公開日2016-09-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
8IOS
DownloadVisualize
BU of 8ios by Molmil
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-1 state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Anraku, Y, Kita, S, Yajima, H, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-03-13
公開日2023-05-24
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants.
Nat Commun, 14, 2023
8IOU
DownloadVisualize
BU of 8iou by Molmil
Structure of SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (1-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Anraku, Y, Kita, S, Yajima, H, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-03-13
公開日2023-05-24
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants.
Nat Commun, 14, 2023
8IOV
DownloadVisualize
BU of 8iov by Molmil
Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Anraku, Y, Kita, S, Yajima, H, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-03-13
公開日2023-05-24
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants.
Nat Commun, 14, 2023
8IOT
DownloadVisualize
BU of 8iot by Molmil
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Anraku, Y, Kita, S, Yajima, H, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
登録日2023-03-13
公開日2023-05-24
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants.
Nat Commun, 14, 2023
3J6H
DownloadVisualize
BU of 3j6h by Molmil
Nucleotide-free Kinesin motor domain complexed with GMPCPP-microtubule
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Kinesin heavy chain isoform 5C, MAGNESIUM ION, ...
著者Morikawa, M, Yajima, H, Nitta, R, Inoue, S, Ogura, T, Sato, C, Hirokawa, N.
登録日2014-02-21
公開日2015-04-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 2015
1I6I
DownloadVisualize
BU of 1i6i by Molmil
CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-02
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
1I5S
DownloadVisualize
BU of 1i5s by Molmil
CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-02-28
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
1IA0
DownloadVisualize
BU of 1ia0 by Molmil
KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-22
公開日2002-03-22
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Switch-based Mechanism of Kinesin Motors
Nature, 411, 2001
5YGY
DownloadVisualize
BU of 5ygy by Molmil
Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide
分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
著者Fuchino, K, Mitsuoka, Y, Masui, M, Kurose, N, Yoshida, S, Komano, K, Yamamoto, T, Ogawa, M, Unemura, C, Hosono, M, Ito, H, Sakaguchi, G, Ando, S, Ohnishi, S, Kido, Y, Fukushima, T, Miyajima, H, Hiroyama, S, Koyabu, K, Dhuyvetter, D, Borghys, H, Gijsen, H, Yamano, Y, Iso, Y, Kusakabe, K.
登録日2017-09-27
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rational Design of Novel 1,3-Oxazine Based beta-Secretase (BACE1) Inhibitors: Incorporation of a Double Bond To Reduce P-gp Efflux Leading to Robust A beta Reduction in the Brain
J. Med. Chem., 61, 2018
3X2T
DownloadVisualize
BU of 3x2t by Molmil
Crystal Structure of the KIF5C Motor Domain With ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin heavy chain isoform 5C
著者Inoue, S, Nitta, R, Hirokawa, N.
登録日2015-01-02
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 34, 2015
8WMD
DownloadVisualize
BU of 8wmd by Molmil
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Nomai, T, Anraku, Y, Kita, S, Hashiguchi, T, Maenaka, K.
登録日2023-10-03
公開日2024-04-24
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron EG.5.1 variant.
Microbiol Immunol, 2024
8WMF
DownloadVisualize
BU of 8wmf by Molmil
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Nomai, T, Anraku, Y, Kita, S, Hashiguchi, T, Maenaka, K.
登録日2023-10-03
公開日2024-04-24
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron EG.5.1 variant.
Microbiol Immunol, 2024
8XLM
DownloadVisualize
BU of 8xlm by Molmil
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Nomai, T, Anraku, Y, Kita, S, Hashiguchi, T, Maenaka, K.
登録日2023-12-26
公開日2024-05-01
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron EG.5.1 variant.
Microbiol Immunol, 2024
8XLN
DownloadVisualize
BU of 8xln by Molmil
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Nomai, T, Anraku, Y, Kita, S, Hashiguchi, T, Maenaka, K.
登録日2023-12-26
公開日2024-05-01
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.78 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron EG.5.1 variant.
Microbiol Immunol, 2024
5GSZ
DownloadVisualize
BU of 5gsz by Molmil
Crystal Structure of the KIF19A Motor Domain Complexed with Mg-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF19, MAGNESIUM ION
著者Wang, D, Nitta, R, Hirokawa, N.
登録日2016-08-18
公開日2016-09-28
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
3WRD
DownloadVisualize
BU of 3wrd by Molmil
Crystal Structure of the KIF5C Motor Domain Without Any Nucleotide
分子名称: Kinesin heavy chain isoform 5C, SULFATE ION
著者Inoue, S, Nitta, R, Hirokawa, N.
登録日2014-02-21
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 34, 2015

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon