8P3L
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p3l by Molmil](/molmil-images/mine/8p3l) | The structure of thiocyanate dehydrogenase mutant form with Thr 169 replaced by Ala from Thioalkalivibrio paradoxus | 分子名称: | COPPER (II) ION, SULFATE ION, Twin-arginine translocation signal domain-containing protein | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Komolov, A.S, Rakitina, T.V, Dergousova, N.I, Dorovatovskii, P.V, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2023-05-18 | 公開日 | 2023-05-31 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Improvement of the Diffraction Properties of Thiocyanate Dehydrogenase Crystals Crystallography Reports, 2023
|
|
8P3M
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p3m by Molmil](/molmil-images/mine/8p3m) | The structure of thiocyanate dehydrogenase mutant form with Lys 281 replaced by Ala from Thioalkalivibrio paradoxus | 分子名称: | BORIC ACID, COPPER (II) ION, SODIUM ION, ... | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Komolov, A.S, Rakitina, T.V, Dergousova, N.I, Dorovatovskii, P.V, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2023-05-18 | 公開日 | 2023-06-07 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Improvement of the Diffraction Properties of Thiocyanate Dehydrogenase Crystals Crystallography Reports, 2023
|
|
8YOU
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8you by Molmil](/molmil-images/mine/8you) | The pmTcDH complex structure with an inhibitor SeCN | 分子名称: | COPPER (II) ION, GLYCEROL, SELENIUM ATOM, ... | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-13 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The pmTcDH complex structure with an inhibitor SeCN To Be Published
|
|
8YU5
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8yu5 by Molmil](/molmil-images/mine/8yu5) | The structure of non-activated thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | The structure of non-activated thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q) To Be Published
|
|
8YU6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8yu6 by Molmil](/molmil-images/mine/8yu6) | The structure of thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q), activated by crystal soaking with 1mM CuCl2 and 1 mM sodium ascorbate | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q), activated by crystal soaking with 1mM CuCl2 and 1 mM sodium ascorbate To Be Published
|
|
8YTS
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8yts by Molmil](/molmil-images/mine/8yts) | The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution | 分子名称: | Cytochrome C, HEME C | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.15 Å) | 主引用文献 | The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution To Be Published
|
|
8Z75
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8z75 by Molmil](/molmil-images/mine/8z75) | The structure of non-activated thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | The structure of non-activated thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH) To Be Published
|
|
8Z77
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8z77 by Molmil](/molmil-images/mine/8z77) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours | 分子名称: | 1,2-ETHANEDIOL, COPPER (II) ION, Twin-arginine translocation signal domain-containing protein | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Minyaev, M.E, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours To Be Published
|
|
8Z76
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8z76 by Molmil](/molmil-images/mine/8z76) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 during 6 months | 分子名称: | 1,2-ETHANEDIOL, COPPER (II) ION, SODIUM ION, ... | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 To Be Published
|
|
8Q9X
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8q9x by Molmil](/molmil-images/mine/8q9x) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum with molecular oxygen at 1.05 A resolution | 分子名称: | COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ... | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2023-08-22 | 公開日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | 主引用文献 | Structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum at atomic resolution To Be Published
|
|
8Q9Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8q9y by Molmil](/molmil-images/mine/8q9y) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum in complex with inhibitor thiourea at 1.10 A resolution | 分子名称: | COPPER (II) ION, GLYCEROL, THIOUREA, ... | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2023-08-22 | 公開日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | 主引用文献 | Structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum at atomic resolution To Be Published
|
|
8AAQ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aaq by Molmil](/molmil-images/mine/8aaq) | Crystal structure of the carotenoid-binding protein domain from silkworm Bombyx mori (BmCBP), CRT-416 form | 分子名称: | Carotenoid-binding protein | 著者 | Varfolomeeva, L.A, Slonimskiy, Y.B, Egorkin, N.A, Minyaev, M.E, Faletrov, Y.V, Boyko, K.M, Sluchanko, N.N. | 登録日 | 2022-07-01 | 公開日 | 2023-02-01 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Preparation and Structural Studies of the Silkworm Carotenoid-Binding Protein Complexed with a New Pigment Crystallography Reports, 2022
|
|
8BPN
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8bpn by Molmil](/molmil-images/mine/8bpn) | The structure of thiocyanate dehydrogenase mutant form with Phe 436 replaced by Gln from Thioalkalivibrio paradoxus | 分子名称: | COPPER (II) ION, DI(HYDROXYETHYL)ETHER, Twin-arginine translocation signal domain-containing protein | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Kulikova, O.G, Dergousova, N.I, Rakitina, T.V, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2023-01-09 | 公開日 | 2023-01-18 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Probing the Role of a Conserved Phenylalanine in the Active Site of Thiocyanate Dehydrogenase Crystals, 12, 2022
|
|
8ZER
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8zer by Molmil](/molmil-images/mine/8zer) | Crystal structure of the complex of Wuhan SARS-CoV-2 RBD (319-541) with P2C5 nanobody | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, Spike protein S1, ... | 著者 | Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M. | 登録日 | 2024-05-06 | 公開日 | 2024-09-04 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain Biochemistry Mosc.47, 89, 2024
|
|
8ZES
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8zes by Molmil](/molmil-images/mine/8zes) | Crystal structure of the Wuhan SARS-CoV-2 RBD (333-541) complexed with P2C5 nanobody | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, ... | 著者 | Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M. | 登録日 | 2024-05-06 | 公開日 | 2024-09-04 | 実験手法 | X-RAY DIFFRACTION (3.7 Å) | 主引用文献 | Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain Biochemistry Mosc.47, 89, 2024
|
|
8P1H
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p1h by Molmil](/molmil-images/mine/8p1h) | Crystal structure of the chimera of human 14-3-3 zeta and phosphorylated cytoplasmic loop fragment of the alpha7 acetylcholine receptor | 分子名称: | 1,2-ETHANEDIOL, AZIDE ION, BENZOIC ACID, ... | 著者 | Boyko, K.M, Kapitonova, A.A, Tugaeva, K.V, Varfolomeeva, L.A, Lyukmanova, E.N, Sluchanko, N.N. | 登録日 | 2023-05-12 | 公開日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Crystal structure reveals canonical recognition of the phosphorylated cytoplasmic loop of human alpha7 nicotinic acetylcholine receptor by 14-3-3 protein. Biochem.Biophys.Res.Commun., 682, 2023
|
|
8YTR
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8ytr by Molmil](/molmil-images/mine/8ytr) | The structure of Cu(II)-CopC from Thioalkalivibrio paradoxus | 分子名称: | COPPER (II) ION, CopC domain-containing protein, DI(HYDROXYETHYL)ETHER | 著者 | Kulikova, O.G, Solovieva, A.Y, Varfolomeeva, L.A, Dergousova, N.I, Nikolaeva, A.Y, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The structure of Cu(II)-CopC from Thioalkalivibrio paradoxus To Be Published
|
|
8YTQ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8ytq by Molmil](/molmil-images/mine/8ytq) | The structure of apoCopC from Thioalkalivibrio paradoxus | 分子名称: | ACETATE ION, COPPER (II) ION, CopC domain-containing protein, ... | 著者 | Kulikova, O.G, Solovieva, A.Y, Varfolomeeva, L.A, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | The structure of apoCopC from Thioalkalivibrio paradoxus To Be Published
|
|
8PYH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8pyh by Molmil](/molmil-images/mine/8pyh) | Crystal structure of the Orange Carotenoid Protein 2 (OCP2) from Crinalium epipsammum PCC 9333 | 分子名称: | ACETATE ION, Orange carotenoid-binding protein, beta,beta-caroten-4-one | 著者 | Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Maksimov, E.G, Popov, V.O, Sluchanko, N.N. | 登録日 | 2023-07-25 | 公開日 | 2024-01-03 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families. Int.J.Biol.Macromol., 254, 2024
|
|
8PZK
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8pzk by Molmil](/molmil-images/mine/8pzk) | Crystal structure of the Orange Carotenoid Protein 2 (OCP2) from Gloeocapsa sp. PCC 7428 | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, GLYCEROL, ... | 著者 | Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Maksimov, E.G, Popov, V.O, Sluchanko, N.N. | 登録日 | 2023-07-27 | 公開日 | 2024-01-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families. Int.J.Biol.Macromol., 254, 2024
|
|
8PEI
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8pei by Molmil](/molmil-images/mine/8pei) | Crystal structure of the biphotochromic fluorescent protein SAASoti (C21N/V127T variant) in its green on-state | 分子名称: | C21N/V127T form of the biphotochromic fluorescent protein SAASoti | 著者 | Boyko, K.M, Varfolomeeva, L.A, Matyuta, I.O, Gavshina, A.V, Solovyev, I.D, Popov, V.O, Savitsky, A.P. | 登録日 | 2023-06-14 | 公開日 | 2024-01-17 | 最終更新日 | 2024-07-31 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | The role of the correlated motion(s) of the chromophore in photoswitching of green and red forms of the photoconvertible fluorescent protein mSAASoti. Sci Rep, 14, 2024
|
|
8AH2
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8ah2 by Molmil](/molmil-images/mine/8ah2) | Crystal structure of human 14-3-3 zeta fused to the NPM1 peptide including phosphoserine-48 | 分子名称: | 14-3-3 protein zeta/delta,Nucleophosmin | 著者 | Boyko, K.M, Kapitonova, A.A, Tugaeva, K.V, Varfolomeeva, L.A, Sluchanko, N.N. | 登録日 | 2022-07-20 | 公開日 | 2022-09-14 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structural basis for the recognition by 14-3-3 proteins of a conditional binding site within the oligomerization domain of human nucleophosmin. Biochem.Biophys.Res.Commun., 627, 2022
|
|
8A0H
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8a0h by Molmil](/molmil-images/mine/8a0h) | Crystal structure of the E25A mutant of the Orange Carotenoid Protein X from Gloeobacter kilaueensis JS1 complexed with echinenone | 分子名称: | OCP N-terminal domain-containing protein, SULFATE ION, beta,beta-caroten-4-one | 著者 | Boyko, K.M, Slonimskiy, Y.B, Zupnik, A.O, Varfolomeeva, L.A, Maksimov, E.G, Sluchanko, N.N. | 登録日 | 2022-05-27 | 公開日 | 2023-02-01 | 最終更新日 | 2024-05-01 | 実験手法 | X-RAY DIFFRACTION (1.73 Å) | 主引用文献 | A primordial Orange Carotenoid Protein: Structure, photoswitching activity and evolutionary aspects. Int.J.Biol.Macromol., 222, 2022
|
|
7ZTR
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7ztr by Molmil](/molmil-images/mine/7ztr) | Crystal structure of the carotenoid-binding protein domain from silkworm Bombyx mori (BmCBP) in the apoform, W232F mutant | 分子名称: | Carotenoid-binding protein | 著者 | Sluchanko, N.N, Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Egorkin, N.A, Maksimov, E.G, Popov, V.O. | 登録日 | 2022-05-11 | 公開日 | 2022-10-26 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Silkworm carotenoprotein as an efficient carotenoid extractor, solubilizer and transporter. Int.J.Biol.Macromol., 223, 2022
|
|
7ZVR
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7zvr by Molmil](/molmil-images/mine/7zvr) | Crystal structure of the carotenoid-binding protein domain from silkworm Bombyx mori (BmCBP) complexed with zeaxanthin | 分子名称: | (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, Carotenoid-binding protein | 著者 | Sluchanko, N.N, Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Egorkin, N.A, Maksimov, E.G, Popov, V.O. | 登録日 | 2022-05-17 | 公開日 | 2022-10-26 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural basis for the carotenoid binding and transport function of a START domain. Structure, 30, 2022
|
|