1VCL
 
 | | Crystal Structure of Hemolytic Lectin CEL-III | | 分子名称: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... | | 著者 | Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T. | | 登録日 | 2004-03-09 | | 公開日 | 2004-09-07 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM
J.Biol.Chem., 279, 2004
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5DE0
 | | Dye-decolorizing protein from V. cholerae | | 分子名称: | Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Uchida, T, Sasaki, M, Tanaka, Y, Yao, M. | | 登録日 | 2015-08-25 | | 公開日 | 2015-10-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.24 Å) | | 主引用文献 | A Dye-Decolorizing Peroxidase from Vibrio cholerae.
Biochemistry, 54, 2015
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7VTJ
 | | The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain. | | 分子名称: | Heavy chain of Fab, Light chain of Fab, VQIIYK peptide | | 著者 | Tsuchida, T, Fukuhara, N, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, Y, Ishida, T, Tomoo, K. | | 登録日 | 2021-10-29 | | 公開日 | 2022-11-02 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
To Be Published
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7FGK
 | | The Fab antibody single structure against tau protein. | | 分子名称: | Fab Heavy Chain, Fab Light Chain, GLYCEROL, ... | | 著者 | Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | | 登録日 | 2021-07-27 | | 公開日 | 2022-07-27 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein.
To Be Published
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7FGJ
 | | The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain. | | 分子名称: | CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ... | | 著者 | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | | 登録日 | 2021-07-27 | | 公開日 | 2022-07-27 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | | 主引用文献 | The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain.
To Be Published
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7FGR
 | | The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain. | | 分子名称: | AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ... | | 著者 | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | | 登録日 | 2021-07-27 | | 公開日 | 2022-07-27 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
To Be Published
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5EXV
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5H6O
 | | Porphobilinogen deaminase from Vibrio Cholerae | | 分子名称: | 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, MAGNESIUM ION, Porphobilinogen deaminase | | 著者 | Funamizu, T, Chen, M, Tanaka, Y, Ishimori, K, Uchida, T. | | 登録日 | 2016-11-14 | | 公開日 | 2017-11-15 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.702 Å) | | 主引用文献 | Porphobilinogen deaminase from Vibrio Cholerae
To Be Published
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2N9J
 | | Solution structure of oxidized human cytochrome c | | 分子名称: | Cytochrome c, HEME C | | 著者 | Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K. | | 登録日 | 2015-11-24 | | 公開日 | 2016-02-17 | | 最終更新日 | 2024-11-06 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c.
Biochem.Biophys.Res.Commun., 469, 2016
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2N9I
 | | Solution structure of reduced human cytochrome c | | 分子名称: | Cytochrome c, HEME C | | 著者 | Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K. | | 登録日 | 2015-11-24 | | 公開日 | 2016-02-17 | | 最終更新日 | 2024-11-20 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c
Biochem.Biophys.Res.Commun., 469, 2016
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1RTU
 | | USTILAGO SPHAEROGENA RIBONUCLEASE U2 | | 分子名称: | RIBONUCLEASE U2, SULFATE ION | | 著者 | Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T. | | 登録日 | 1995-05-12 | | 公開日 | 1996-11-08 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution.
Biochemistry, 34, 1995
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1FJD
 | | HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14 | | 分子名称: | PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE) | | 著者 | Terada, T, Shirouzu, M, Fukumori, Y, Fujimori, F, Ito, Y, Kigawa, T, Yokoyama, S, Uchida, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2000-08-08 | | 公開日 | 2001-08-08 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
J.Mol.Biol., 305, 2001
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2D3B
 | | Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine | | 分子名称: | (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | | 著者 | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | | 登録日 | 2005-09-26 | | 公開日 | 2006-07-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | | 主引用文献 | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
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2D3C
 | | Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Phosphinothricin Phosphate | | 分子名称: | (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... | | 著者 | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | | 登録日 | 2005-09-26 | | 公開日 | 2006-07-18 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (3.81 Å) | | 主引用文献 | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
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2D3A
 | | Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ... | | 著者 | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | | 登録日 | 2005-09-26 | | 公開日 | 2006-07-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.63 Å) | | 主引用文献 | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
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2Z49
 | | Crystal Structure of Hemolytic Lectin CEL-III Complexed with methyl-alpha-D-galactopylanoside | | 分子名称: | CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ... | | 著者 | Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y. | | 登録日 | 2007-06-13 | | 公開日 | 2007-10-30 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
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2Z48
 | | Crystal Structure of Hemolytic Lectin CEL-III Complexed with GalNac | | 分子名称: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ... | | 著者 | Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y. | | 登録日 | 2007-06-13 | | 公開日 | 2007-10-30 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
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6LRA
 | | The complex structure of PHF core domain peptide of tau and antibody's Fab domain. | | 分子名称: | Fab Heavy Chain, Fab Light Chain, VQIINK | | 著者 | Tomohiro, T, Kouki, S, Tomohiro, S, Takahiro, T, Katsushiro, M, Yasuko, I, Katsuhiko, M, Taizo, T, Toshimitsu, I, Koji, T. | | 登録日 | 2020-01-15 | | 公開日 | 2020-08-26 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of the human tau PHF core domain VQIINK complexed with the Fab domain of monoclonal antibody Tau2r3.
Febs Lett., 2020
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7FGL
 | | The complex structure of PHF core domain peptide of tau, VQIVYK, and antibody's Fab domain. | | 分子名称: | AMMONIUM ION, Fab Heavy Chain, Fab Light Chain, ... | | 著者 | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | | 登録日 | 2021-07-27 | | 公開日 | 2022-07-27 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | The cross-reaction complex structure with VQIVYK of tau and the antibody's Fab domain.
To Be Published
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4X8Y
 | | Crystal structure of human PGRMC1 cytochrome b5-like domain | | 分子名称: | Membrane-associated progesterone receptor component 1, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Nakane, T, Yamamoto, T, Shimamura, T, Kobayashi, T, Kabe, Y, Suematsu, M. | | 登録日 | 2014-12-11 | | 公開日 | 2016-03-23 | | 最終更新日 | 2024-11-06 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance
Nat Commun, 7, 2016
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1WMZ
 | | Crystal Structure of C-type Lectin CEL-I complexed with N-acetyl-D-galactosamine | | 分子名称: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ... | | 著者 | Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T. | | 登録日 | 2004-07-22 | | 公開日 | 2004-09-07 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
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1WMY
 | | Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ... | | 著者 | Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T. | | 登録日 | 2004-07-22 | | 公開日 | 2004-09-07 | | 最終更新日 | 2024-11-06 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
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2V1H
 | | Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 5.2 | | 分子名称: | GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... | | 著者 | Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K. | | 登録日 | 2007-05-24 | | 公開日 | 2007-06-12 | | 最終更新日 | 2023-12-13 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
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2V1G
 | | Crystal structure of radiation-induced myoglobin compound II - intermediate H at pH 5.2 | | 分子名称: | GLYCEROL, HYDROXIDE ION, MYOGLOBIN, ... | | 著者 | Hersleth, H.-P, Dalhus, B, Gorbitz, C.H, Andersson, K.K. | | 登録日 | 2007-05-24 | | 公開日 | 2007-06-12 | | 最終更新日 | 2023-12-13 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
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2V1J
 | | Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 8.7 | | 分子名称: | GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... | | 著者 | Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K. | | 登録日 | 2007-05-24 | | 公開日 | 2007-06-12 | | 最終更新日 | 2023-12-13 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
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