1SKT
 
 | | SOLUTION STRUCTURE OF APO N-DOMAIN OF TROPONIN C, NMR, 40 STRUCTURES | | 分子名称: | TROPONIN-C | | 著者 | Tsuda, S, Miura, A, Gagne, S.M, Spyracopoulos, L, Sykes, B.D. | | 登録日 | 1998-04-06 | | 公開日 | 1998-12-09 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Low-temperature-induced structural changes in the Apo regulatory domain of skeletal muscle troponin C.
Biochemistry, 38, 1999
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1ZAC
 | | N-DOMAIN OF TROPONIN C FROM CHICKEN SKELETAL MUSCLE, NMR, MINIMIZED AVERAGE STRUCTURE | | 分子名称: | TROPONIN-C | | 著者 | Tsuda, S, Miura, A, Gagne, S.M, Spyracopoulos, L, Sykes, B.D. | | 登録日 | 1998-04-07 | | 公開日 | 1998-11-11 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Low-temperature-induced structural changes in the Apo regulatory domain of skeletal muscle troponin C.
Biochemistry, 38, 1999
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2PIS
 | | Efforts toward Expansion of the Genetic Alphabet: Structure and Replication of Unnatural Base Pairs | | 分子名称: | DNA (5'-D(*CP*GP*(CBR)P*GP*AP*AP*(FFD)P*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION | | 著者 | Matsuda, S, Fillo, J.D, Henry, A.A, Wilkins, S.J, Rai, P, Dwyer, T.J, Geierstanger, B.H, Wemmer, D.E, Schultz, P.G, Spraggon, G, Romesberg, F.E. | | 登録日 | 2007-04-13 | | 公開日 | 2007-10-30 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Efforts toward expansion of the genetic alphabet: structure and replication of unnatural base pairs.
J.Am.Chem.Soc., 129, 2007
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1DQC
 | | SOLUTION STRUCTURE OF TACHYCITIN, AN ANTIMICROBIAL PROTEIN WITH CHITIN-BINDING FUNCTION | | 分子名称: | TACHYCITIN | | 著者 | Suetake, T, Tsuda, S, Kawabata, S, Miura, K, Kawano, K. | | 登録日 | 2000-01-04 | | 公開日 | 2000-09-13 | | 最終更新日 | 2024-11-06 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Chitin-binding proteins in invertebrates and plants comprise a common chitin-binding structural motif.
J.Biol.Chem., 275, 2000
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1C8A
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1C89
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1SQJ
 | | Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) | | 分子名称: | oligoxyloglucan reducing-end-specific cellobiohydrolase | | 著者 | Yaoi, K, Kondo, H, Noro, N, Suzuki, M, Tsuda, S, Mitsuishi, Y. | | 登録日 | 2004-03-19 | | 公開日 | 2004-07-20 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Tandem Repeat of a Seven-Bladed beta-Propeller Domain in Oligoxyloglucan Reducing-End-Specific Cellobiohydrolase
Structure, 12, 2004
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5XQN
 | | Crystal structure of Notched-fin eelpout type III antifreeze protein (NFE6, AFP), C2221 form. | | 分子名称: | Ice-structuring protein, SULFATE ION | | 著者 | Adachi, M, Kondo, H, Tsuda, S. | | 登録日 | 2017-06-07 | | 公開日 | 2018-05-16 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (1.19 Å) | | 主引用文献 | Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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5XQR
 | | Crystal structure of Notched-fin eelpout type III antifreeze protein A20V mutant (NFE6, AFP), C2221 form | | 分子名称: | ACETATE ION, Ice-structuring protein | | 著者 | Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. | | 登録日 | 2017-06-07 | | 公開日 | 2018-05-16 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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5B5H
 | | Hydrophobic ice-binding site confer hyperactivity on antifreeze protein from a snow mold fungus | | 分子名称: | Antifreeze protein, SODIUM ION, SULFATE ION | | 著者 | Cheng, J, Hanada, Y, Miura, A, Tsuda, S, Kondo, H. | | 登録日 | 2016-05-06 | | 公開日 | 2016-09-28 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1 Å) | | 主引用文献 | Hydrophobic ice-binding sites confer hyperactivity of an antifreeze protein from a snow mold fungus.
Biochem.J., 473, 2016
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7JJV
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7BWY
 | | Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus. | | 分子名称: | GLYCEROL, Ice-binding protein isoform1a | | 著者 | Yamauchi, A, Arai, T, Kondo, H, Tsuda, S. | | 登録日 | 2020-04-16 | | 公開日 | 2020-05-27 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.02 Å) | | 主引用文献 | An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
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7BWX
 | | Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus. | | 分子名称: | GLYCEROL, Ice-binding protein isoform1a, SULFATE ION | | 著者 | Yamauchi, A, Arai, T, Kondo, H, Tsuda, S. | | 登録日 | 2020-04-16 | | 公開日 | 2020-05-27 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.904 Å) | | 主引用文献 | An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
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2LX2
 | | 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | | 分子名称: | Type III antifreeze protein nfeAFP11 | | 著者 | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | | 登録日 | 2012-08-12 | | 公開日 | 2013-07-24 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
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2LX3
 | | 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | | 分子名称: | Type III antifreeze protein nfeAFP11 | | 著者 | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | | 登録日 | 2012-08-12 | | 公開日 | 2013-07-24 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
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3VN3
 | | Fungal antifreeze protein exerts hyperactivity by constructing an inequable beta-helix | | 分子名称: | 1,2-ETHANEDIOL, Antifreeze protein | | 著者 | Kondo, H, Xiao, N, Hanada, Y, Sugimoto, H, Hoshino, T, Garnham, C.P, Davies, P.L, Tsuda, S. | | 登録日 | 2011-12-21 | | 公開日 | 2012-06-06 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (0.95 Å) | | 主引用文献 | Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation
Proc.Natl.Acad.Sci.USA, 109, 2012
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1ISP
 | | Crystal structure of Bacillus subtilis lipase at 1.3A resolution | | 分子名称: | GLYCEROL, lipase | | 著者 | Kawasaki, K, Kondo, H, Suzuki, M, Ohgiya, S, Tsuda, S. | | 登録日 | 2001-12-19 | | 公開日 | 2002-12-19 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Alternate conformations observed in catalytic serine of Bacillus subtilis lipase determined at 1.3 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
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3WP9
 | | Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. | | 分子名称: | Ice-binding protein | | 著者 | Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H. | | 登録日 | 2014-01-10 | | 公開日 | 2014-07-02 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences.
Febs J., 281, 2014
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6JK5
 | | Ca2+-dependent type II antifreeze protein (Ca2+-free form) | | 分子名称: | SULFATE ION, Type II antifreeze protein | | 著者 | Arai, T, Tsuda, S, Kondo, H, Nishimiya, Y. | | 登録日 | 2019-02-27 | | 公開日 | 2019-06-26 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | | 主引用文献 | Calcium-Binding Generates the Semi-Clathrate Waters on a Type II Antifreeze Protein to Adsorb onto an Ice Crystal Surface.
Biomolecules, 9, 2019
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6JK4
 | | Ca2+-dependent type II antifreeze protein | | 分子名称: | CALCIUM ION, Type II antifreeze protein | | 著者 | Arai, T, Tsuda, S, Kondo, H, Nishimiya, Y. | | 登録日 | 2019-02-27 | | 公開日 | 2019-06-26 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (1.06 Å) | | 主引用文献 | Calcium-Binding Generates the Semi-Clathrate Waters on a Type II Antifreeze Protein to Adsorb onto an Ice Crystal Surface.
Biomolecules, 9, 2019
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5XQV
 | | Crystal structure of Notched-fin eelpout type III antifreeze protein A20L mutant (NFE6, AFP), P21 form | | 分子名称: | Ice-structuring protein | | 著者 | Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. | | 登録日 | 2017-06-07 | | 公開日 | 2018-05-16 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (0.97 Å) | | 主引用文献 | Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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5XR0
 | | Crystal structure of Notched-fin eelpout type III antifreeze protein A20T mutant (NFE6, AFP), P21 form | | 分子名称: | Ice-structuring protein | | 著者 | Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. | | 登録日 | 2017-06-07 | | 公開日 | 2018-05-16 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (0.98 Å) | | 主引用文献 | Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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1IY3
 | | Solution Structure of the Human lysozyme at 4 degree C | | 分子名称: | Lysozyme | | 著者 | Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S. | | 登録日 | 2002-07-15 | | 公開日 | 2002-07-31 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
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1I56
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5XQP
 | | Crystal structure of Notched-fin eelpout type III antifreeze protein (NFE6, AFP), P212121 form | | 分子名称: | Ice-structuring protein, SULFATE ION | | 著者 | Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. | | 登録日 | 2017-06-07 | | 公開日 | 2018-05-16 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1 Å) | | 主引用文献 | Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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