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2DDE
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BU of 2dde by Molmil
Structure of cinnamycin complexed with lysophosphatidylethanolamine
分子名称: (7S)-4,7-DIHYDROXY-10-OXO-3,5,9-TRIOXA-4-PHOSPHAUNDECAN-1-AMINIUM 4-OXIDE, LANTIBIOTIC CINNAMYCIN
著者Hosoda, K, Ohya, M, Kohno, T, Maeda, T, Endo, S, Wakamatsu, K.
登録日2006-01-27
公開日2006-02-21
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Structure determination of an immunopotentiator peptide, cinnamycin, complexed with lysophosphatidylethanolamine by 1H-NMR1.
J.Biochem., 119, 1996
1IRZ
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BU of 1irz by Molmil
Solution structure of ARR10-B belonging to the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators
分子名称: ARR10-B
著者Yamazaki, T, Katoh, E, Hosoda, K, Mizuno, T.
登録日2001-10-25
公開日2003-02-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators
PLANT CELL, 14, 2003
1GC2
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BU of 1gc2 by Molmil
CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA
分子名称: METHIONINE GAMMA-LYASE
著者Motoshima, H, Inagaki, K, Kumasaka, T, Furuichi, M, Inoue, H, Tamura, T, Esaki, N, Soda, K, Tanaka, N, Yamamoto, M, Tanaka, H.
登録日2000-07-06
公開日2002-05-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida.
J.Biochem., 128, 2000
1GC0
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BU of 1gc0 by Molmil
CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA
分子名称: METHIONINE GAMMA-LYASE
著者Motoshima, H, Inagaki, K, Kumasaka, T, Furuichi, M, Inoue, H, Tamura, T, Esaki, N, Soda, K, Tanaka, N, Yamamoto, M, Tanaka, H.
登録日2000-07-06
公開日2002-05-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida.
J.Biochem., 128, 2000
1JUD
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BU of 1jud by Molmil
L-2-HALOACID DEHALOGENASE
分子名称: L-2-HALOACID DEHALOGENASE
著者Hisano, T, Hata, Y, Fujii, T, Liu, J.-Q, Kurihara, T, Esaki, N, Soda, K.
登録日1996-06-03
公開日1996-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp. YL. An alpha/beta hydrolase structure that is different from the alpha/beta hydrolase fold.
J.Biol.Chem., 271, 1996
2RQ9
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BU of 2rq9 by Molmil
Solution structure of human acidic fibroblast growth factor (aFGF) in the presence of a protein stabilizer NDSB-new
分子名称: Heparin-binding growth factor 1
著者Enomoto, M, Xiang, L, Ishii, T, Tochio, N, Hosoda, K, Inoue, Y, Nameki, N, Wakamatsu, K.
登録日2009-03-12
公開日2010-03-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of human acidic fibroblast growth factor (aFGF) in the presence of a protein stabilizer NDSB-new
To be Published
5DAA
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BU of 5daa by Molmil
E177K MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Peisach, D, Ringe, D.
登録日1998-12-13
公開日1998-12-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Effects of the E177K mutation in D-amino acid transaminase. Studies on an essential coenzyme anchoring group that contributes to stereochemical fidelity.
Biochemistry, 38, 1999
2DAB
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BU of 2dab by Molmil
L201A MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Sugio, S, Kashima, A, Kishimoto, K, Peisach, D, Petsko, G.A, Ringe, D, Yoshimura, T, Esaki, N.
登録日1997-11-30
公開日1998-06-03
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of L201A mutant of D-amino acid aminotransferase at 2.0 A resolution: implication of the structural role of Leu201 in transamination.
Protein Eng., 11, 1998
1DAA
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BU of 1daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Sugio, S, Peisach, D, Ringe, D.
登録日1995-06-09
公開日1995-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a D-amino acid aminotransferase: how the protein controls stereoselectivity.
Biochemistry, 34, 1995
1A0G
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BU of 1a0g by Molmil
L201A MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, D-AMINO ACID AMINOTRANSFERASE
著者Sugio, S, Kashima, A, Kishimoto, K, Peisach, D, Petsko, G.A, Ringe, D, Yoshimura, T, Esaki, N.
登録日1997-11-30
公開日1998-06-03
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of L201A mutant of D-amino acid aminotransferase at 2.0 A resolution: implication of the structural role of Leu201 in transamination.
Protein Eng., 11, 1998
1UGU
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BU of 1ugu by Molmil
Crystal structure of PYP E46Q mutant
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Sugishima, M, Tanimoto, Y, Hamada, N, Tokunaga, F, Fukuyama, K.
登録日2003-06-19
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of photoactive yellow protein (PYP) E46Q mutant at 1.2 A resolution suggests how Glu46 controls the spectroscopic and kinetic characteristics of PYP.
Acta Crystallogr.,Sect.D, 60, 2004
1G2W
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BU of 1g2w by Molmil
E177S MUTANT OF THE PYRIDOXAL-5'-PHOSPHATE ENZYME D-AMINO ACID AMINOTRANSFERASE
分子名称: ACETATE ION, D-ALANINE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Lepore, B.W, Ringe, D.
登録日2000-10-21
公開日2000-11-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Studies on an Active Site Residue, E177, That Affects Binding of the Coenzyme in D-Amino Acid Transaminase, and Mechanistic Studies on a Suicide Substrate
Biochemistry and Molecular Biology of Vitamin B6 and PQQ-dependent Proteins, 10th Annual International Symposium on Vitamin B6, 2000
1SFT
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BU of 1sft by Molmil
ALANINE RACEMASE
分子名称: ACETATE ION, ALANINE RACEMASE, PYRIDOXAL-5'-PHOSPHATE
著者Shaw, J.P, Petsko, G.A, Ringe, D.
登録日1996-09-20
公開日1997-02-12
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-A resolution.
Biochemistry, 36, 1997
2SFP
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BU of 2sfp by Molmil
ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR
分子名称: PROPANOIC ACID, PROTEIN (ALANINE RACEMASE), PYRIDOXAL-5'-PHOSPHATE
著者Morollo, A.A, Petsko, G.A, Ringe, D.
登録日1999-02-16
公開日1999-02-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a Michaelis complex analogue: propionate binds in the substrate carboxylate site of alanine racemase.
Biochemistry, 38, 1999
3DAA
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BU of 3daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY PYRIDOXYL-D-ALANINE
分子名称: D-AMINO ACID AMINOTRANSFERASE, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1998-01-20
公開日1998-04-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic study of steps along the reaction pathway of D-amino acid aminotransferase.
Biochemistry, 37, 1998
4DAA
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BU of 4daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE IN PYRIDOXAL-5'-PHOSPHATE (PLP) FORM
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1998-01-26
公開日1998-04-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic study of steps along the reaction pathway of D-amino acid aminotransferase.
Biochemistry, 37, 1998
1QH9
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BU of 1qh9 by Molmil
ENZYME-PRODUCT COMPLEX OF L-2-HALOACID DEHALOGENASE
分子名称: 2-HALOACID DEHALOGENASE, LACTIC ACID
著者Li, Y.-F, Hata, Y, Fujii, T, Kurihara, T, Esaki, N.
登録日1999-05-12
公開日2000-05-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Structure of L-2-Haloacid Dehalogenase Complexed with a Reaction Product Reveals the Mechanism of Intermediate Hydrolysis in Dehalogenase
To be Published
1BD0
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BU of 1bd0 by Molmil
ALANINE RACEMASE COMPLEXED WITH ALANINE PHOSPHONATE
分子名称: ALANINE RACEMASE, {1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID
著者Stamper, G.F, Morollo, A.A, Ringe, D.
登録日1998-05-12
公開日1998-10-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Reaction of alanine racemase with 1-aminoethylphosphonic acid forms a stable external aldimine.
Biochemistry, 37, 1998
2DAA
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BU of 2daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY D-CYCLOSERINE
分子名称: D-AMINO ACID AMINOTRANSFERASE, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1997-10-27
公開日1998-03-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献D-Cycloserine Inactivation of D-Amino Acid Aminotransferase Leads to a Stable Noncovalent Protein Complex with an Aromatic Cycloserine-Plp Derivative
J.Am.Chem.Soc., 120, 1998
3FKB
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Structure of NDPK H122G and tenofovir-diphosphate
分子名称: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
著者Morera, S, Chen, Y.X.
登録日2008-12-16
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Nucleoside diphosphate kinase and the activation of antiviral phosphonate analogs of nucleotides: binding mode and phosphorylation of tenofovir derivatives
Nucleosides Nucleotides Nucleic Acids, 28, 2009

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