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4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.402 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
6P20
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BU of 6p20 by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5,PHIKZ164, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
To Be Published
6P1Z
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BU of 6p1z by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
分子名称: 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
To Be Published
6P22
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BU of 6p22 by Molmil
Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.291 Å)
主引用文献Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
To Be Published
6P2A
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BU of 6p2a by Molmil
Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-21
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
To Be Published
5IW9
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BU of 5iw9 by Molmil
Structure of bacteriophage T4 gp25, sheath polymerization initiator
分子名称: Baseplate wedge protein gp25
著者Leiman, P.G, Browning, C, Shneider, M.M.
登録日2016-03-22
公開日2016-05-11
最終更新日2016-06-08
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
3BKV
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BU of 3bkv by Molmil
X-ray structure of the bacteriophage phiKZ lytic transglycosylase, gp144, in complex with chitotetraose, (NAG)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, SULFATE ION, ...
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-07
公開日2008-01-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
3BKH
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BU of 3bkh by Molmil
Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144
分子名称: NICKEL (II) ION, SULFATE ION, lytic transglycosylase
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-06
公開日2008-01-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
分子名称: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.322 Å)
主引用文献The conserved architecture of the T6SS central spike complex
To be Published
4MTM
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BU of 4mtm by Molmil
Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ...
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22
Biorxiv, 2019
4Y9V
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BU of 4y9v by Molmil
Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-alpha-D-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-mannopyranuronic acid, CHLORIDE ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-02-17
公開日2017-02-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structure of Acinetobacter baumannii bacteriophage AP22 polysaccharide degrading lyase in complex with A. baumannii capsular saccharide at 0.9 A resolution
TO BE PUBLISHED
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
分子名称: Collar PA0615, Sheath PA0622
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
5CES
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BU of 5ces by Molmil
C-terminal domain of the R-type pyocin baseplate protein PA0618
分子名称: PA0618
著者Plattner, M, Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-07-07
公開日2016-07-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
分子名称: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2012-07-27
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
分子名称: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5H
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BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
分子名称: Probable bacteriophage protein Pyocin R2
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5K
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BU of 6u5k by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - baseplate
分子名称: Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5F
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BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
分子名称: Collar PA0615, Sheath PA0622, Tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
2FKK
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BU of 2fkk by Molmil
Crystal structure of the C-terminal domain of the bacteriophage T4 gene product 10
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
著者Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2006-01-04
公開日2006-04-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
2FL9
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BU of 2fl9 by Molmil
Evolution of bacteriophage tails: Structure of T4 gene product 10
分子名称: Baseplate structural protein Gp10
著者Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2006-01-05
公開日2006-04-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (17 Å)
主引用文献Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
3H2T
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BU of 3h2t by Molmil
Crystal structure of gene product 6, baseplate protein of bacteriophage T4
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-14
公開日2009-05-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of gene product 6 of bacteriophage t4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3W
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BU of 3h3w by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3Y
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BU of 3h3y by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 star-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009
6ET6
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BU of 6et6 by Molmil
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
分子名称: GLYCEROL, Lysozyme, SULFATE ION
著者Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
登録日2017-10-25
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018

 

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