Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3MGU
DownloadVisualize
BU of 3mgu by Molmil
Structure of S. cerevisiae Tpa1 protein, a proline hydroxylase modifying ribosomal protein Rps23
分子名称: FE (II) ION, PKHD-type hydroxylase TPA1
著者Henri, J, Rispal, D, Bayart, E, van Tilbeurgh, H, Seraphin, B, Graille, M.
登録日2010-04-07
公開日2010-07-14
最終更新日2018-01-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional insights into S. cerevisiae Tpa1, a putative prolyl hydroxylase influencing translation termination and transcription
To be Published
2FHO
DownloadVisualize
BU of 2fho by Molmil
NMR solution structure of the human spliceosomal protein complex p14-SF3b155
分子名称: spliceosomal protein SF3b155, spliceosomal protein p14
著者Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-26
公開日2006-12-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR solution structure of the human spliceosomal protein complex p14-SF3b155
To be Published
1UOC
DownloadVisualize
BU of 1uoc by Molmil
X-ray structure of the RNase domain of the yeast Pop2 protein
分子名称: CALCIUM ION, POP2, XENON
著者Thore, S, Mauxion, F, Seraphin, B, Suck, D.
登録日2003-09-16
公開日2003-11-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-Ray Structure and Activity of the Yeast Pop2 Protein: A Nuclease Subunit of the Mrna Deadenylase Complex
Embo Rep., 4, 2003
4UQT
DownloadVisualize
BU of 4uqt by Molmil
RRM-peptide structure in RES complex
分子名称: PRE-MRNA-SPLICING FACTOR CWC26, U2 SNRNP COMPONENT IST3
著者Tripsianes, K, Friberg, A, Barrandon, C, Seraphin, B, Sattler, M.
登録日2014-06-25
公開日2014-09-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A Novel Protein-Protein Interaction in the Res (Retention and Splicing) Complex.
J.Biol.Chem., 289, 2014
4X33
DownloadVisualize
BU of 4x33 by Molmil
Structure of the Elongator cofactor complex Kti11/Kti13 at 1.45A
分子名称: 1,2-DIMETHOXYETHANE, CHLORIDE ION, Diphthamide biosynthesis protein 3, ...
著者Kolaj-Robin, O, McEwen, A.G, Cavarelli, J, Seraphin, B.
登録日2014-11-27
公開日2015-01-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of the Elongator cofactor complex Kti11/Kti13 provides insight into the role of Kti13 in Elongator-dependent tRNA modification.
Febs J., 282, 2015
1I5L
DownloadVisualize
BU of 1i5l by Molmil
CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA
分子名称: 5'-R(*UP*UP*U)-3', PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1, URIDINE
著者Toro, I, Thore, S, Mayer, C, Basquin, J, Seraphin, B, Suck, D.
登録日2001-02-28
公開日2001-08-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex.
EMBO J., 20, 2001
1I4K
DownloadVisualize
BU of 1i4k by Molmil
CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS AT 2.5A RESOLUTION
分子名称: CITRIC ACID, PUTATIVE SNRNP SM-LIKE PROTEIN
著者Toro, I, Thore, S, Mayer, C, Basquin, J, Seraphin, B, Suck, D.
登録日2001-02-22
公開日2001-08-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex.
EMBO J., 20, 2001
4OJJ
DownloadVisualize
BU of 4ojj by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P212121)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
著者Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M.
登録日2014-01-21
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment.
Plos One, 9, 2014
4OGP
DownloadVisualize
BU of 4ogp by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P21)
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2-associated protein PAT1
著者Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M.
登録日2014-01-16
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment.
Plos One, 9, 2014
5LON
DownloadVisualize
BU of 5lon by Molmil
Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.
分子名称: KLLA0E01827p, KLLA0F23980p
著者Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
登録日2016-08-09
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
5LMF
DownloadVisualize
BU of 5lmf by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM3 peptide (region 484-500)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-30
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2MZS
DownloadVisualize
BU of 2mzs by Molmil
NMR structure of the RRM2 domain of Hrb1
分子名称: Protein HRB1
著者Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J.
登録日2015-02-23
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Gbp2 interacts with THO/TREX through a novel type of RRM domain.
Nucleic Acids Res., 44, 2016
3QTM
DownloadVisualize
BU of 3qtm by Molmil
Structure of S. pombe nuclear import adaptor Nro1 (Space group P21)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
著者Rispal, D, Henri, J, van Tilbeurgh, H, Graille, M, Seraphin, B.
登録日2011-02-23
公開日2011-09-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and functional analysis of Nro1/Ett1: a protein involved in translation termination in S. cerevisiae and in O2-mediated gene control in S. pombe
Rna, 17, 2011
3QTN
DownloadVisualize
BU of 3qtn by Molmil
Structure of S. pombe nuclear import adaptor Nro1 (Space group P6522)
分子名称: Uncharacterized protein C4B3.07
著者Rispal, D, Henri, J, van Tilbeurgh, H, Graille, M, Seraphin, B.
登録日2011-02-23
公開日2011-09-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.499 Å)
主引用文献Structural and functional analysis of Nro1/Ett1: a protein involved in translation termination in S. cerevisiae and in O2-mediated gene control in S. pombe
Rna, 17, 2011
5LM5
DownloadVisualize
BU of 5lm5 by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM2 peptide (region 435-451)
分子名称: DNA topoisomerase 2-associated protein PAT1, mRNA decapping protein 2
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-29
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LMG
DownloadVisualize
BU of 5lmg by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM10 peptide (region 954-970)
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA topoisomerase 2-associated protein PAT1, ...
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-30
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2MZT
DownloadVisualize
BU of 2mzt by Molmil
NMR structure of the RRM3 domain of Hrb1
分子名称: Protein HRB1
著者Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J.
登録日2015-02-23
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Gbp2 interacts with THO/TREX through a novel type of RRM domain.
Nucleic Acids Res., 44, 2016
5LOP
DownloadVisualize
BU of 5lop by Molmil
Structure of the active form of /K. lactis/ Dcp1-Dcp2-Edc3 decapping complex bound to m7GDP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, KLLA0A11308p, KLLA0E01827p, ...
著者Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
登録日2016-08-09
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
2MZQ
DownloadVisualize
BU of 2mzq by Molmil
NMR structure of the RRM3 domain of Gbp2
分子名称: Single-strand telomeric DNA-binding protein GBP2
著者Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J.
登録日2015-02-23
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Gbp2 interacts with THO/TREX through a novel type of RRM domain.
Nucleic Acids Res., 44, 2016
2MZR
DownloadVisualize
BU of 2mzr by Molmil
NMR structure of the RRM1 domain of Hrb1
分子名称: Protein HRB1
著者Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J.
登録日2015-02-23
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Gbp2 interacts with THO/TREX through a novel type of RRM domain.
Nucleic Acids Res., 44, 2016
2JKD
DownloadVisualize
BU of 2jkd by Molmil
Structure of the yeast Pml1 splicing factor and its integration into the RES complex
分子名称: GLYCEROL, PRE-MRNA LEAKAGE PROTEIN 1, SULFATE ION
著者Brooks, M.A, Dziembowski, A, Quevillon-Cheruel, S, Henriot, V, Faux, C, van Tilbeurgh, H, Seraphin, B.
登録日2008-08-27
公開日2008-09-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Yeast Pml1 Splicing Factor and its Integration Into the Res Complex
Nucleic Acids Res., 37, 2009
4A9A
DownloadVisualize
BU of 4a9a by Molmil
Structure of Rbg1 in complex with Tma46 dfrp domain
分子名称: RIBOSOME-INTERACTING GTPASE 1, TRANSLATION MACHINERY-ASSOCIATED PROTEIN 46
著者Francis, S.M, Gas, M, Daugeron, M, Seraphin, B, Bravo, J.
登録日2011-11-25
公開日2012-10-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Rbg1-Tma46 Dimer Structure Reveals New Functional Domains and Their Role in Polysome Recruitment.
Nucleic Acids Res., 40, 2012
5LSL
DownloadVisualize
BU of 5lsl by Molmil
Crystal structure of yeast Hsh49p in complex with Cus1p binding domain.
分子名称: Cold sensitive U2 snRNA suppressor 1, Protein HSH49
著者van Roon, A.M, Obayashi, E, Sposito, B, Oubridge, C, Nagai, K.
登録日2016-09-02
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of U2 snRNP SF3b components: Hsh49p in complex with Cus1p-binding domain.
RNA, 23, 2017
6Y3Z
DownloadVisualize
BU of 6y3z by Molmil
Crystal structure of the Pby1 ATP-grasp enzyme bound to the S. cerevisiae mRNA decapping complex (Dcp1-Dcp2-Edc3)
分子名称: Enhancer of mRNA-decapping protein 3, MAGNESIUM ION, Probable tubulin--tyrosine ligase PBY1, ...
著者Graille, M.
登録日2020-02-19
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Pby1 is a direct partner of the Dcp2 decapping enzyme.
Nucleic Acids Res., 48, 2020
6Y3P
DownloadVisualize
BU of 6y3p by Molmil
Crystal structure of the C-terminal domain from K. lactis Pby1, an ATP-grasp enzyme interacting with the mRNA decapping enzyme Dcp2
分子名称: KLLA0B12012p, SULFATE ION
著者Graille, M.
登録日2020-02-18
公開日2020-04-29
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Pby1 is a direct partner of the Dcp2 decapping enzyme.
Nucleic Acids Res., 48, 2020

 

12>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon