Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8QYG
DownloadVisualize
BU of 8qyg by Molmil
Crystal structure of Nitroreductase from Bacillus tequilensis
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Rozeboom, H.J, Russo, S, Fraaije, M.W, Poelarends, G.J.
登録日2023-10-26
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structure of Nitroreductase from Bacillus tequilensis
To Be Published
2PYG
DownloadVisualize
BU of 2pyg by Molmil
Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module
分子名称: CALCIUM ION, GLYCEROL, Poly(beta-D-mannuronate) C5 epimerase 4
著者Rozeboom, H.J, Bjerkan, T.M, Kalk, K.H, Ertesvag, H, Holtan, S, Aachmann, F.L, Valla, S, Dijkstra, B.W.
登録日2007-05-16
公開日2008-05-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Mutational Characterization of the Catalytic A-module of the Mannuronan C-5-epimerase AlgE4 from Azotobacter vinelandii.
J.Biol.Chem., 283, 2008
2PYH
DownloadVisualize
BU of 2pyh by Molmil
Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide
分子名称: CALCIUM ION, Poly(beta-D-mannuronate) C5 epimerase 4, alpha-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid
著者Rozeboom, H.J, Bjerkan, T.M, Kalk, K.H, Ertesvag, H, Holtan, S, Aachman, F.L, Valla, S, Dijkstra, B.W.
登録日2007-05-16
公開日2008-05-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Mutational Characterization of the Catalytic A-module of the Mannuronan C-5-epimerase AlgE4 from Azotobacter vinelandii.
J.Biol.Chem., 283, 2008
4CVC
DownloadVisualize
BU of 4cvc by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes with zinc in the active site
分子名称: ALCOHOL DEHYDROGENASE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
登録日2014-03-25
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4CVB
DownloadVisualize
BU of 4cvb by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes
分子名称: ALCOHOL DEHYDROGENASE, CALCIUM ION, CHLORIDE ION, ...
著者Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
登録日2014-03-25
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4AMW
DownloadVisualize
BU of 4amw by Molmil
CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride
分子名称: 5-fluoro-alpha-L-idopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ...
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2012-03-14
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4AMX
DownloadVisualize
BU of 4amx by Molmil
CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride
分子名称: 5-fluoro-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ...
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2012-03-14
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2I
DownloadVisualize
BU of 2x2i by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2010-01-13
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2H
DownloadVisualize
BU of 2x2h by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase
分子名称: ACETATE ION, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, CHLORIDE ION, ...
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2010-01-13
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2J
DownloadVisualize
BU of 2x2j by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, CHLORIDE ION, ...
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2010-01-13
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4C2L
DownloadVisualize
BU of 4c2l by Molmil
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDO-XYLOGALACTURONAN HYDROLASE A, ...
著者Rozeboom, H.J, Beldman, G, Schols, H.A, Dijkstra, B.W.
登録日2013-08-19
公開日2013-09-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of Endo-Xylogalacturonan Hydrolase from Aspergillus Tubingensis.
FEBS J., 280, 2013
4CCY
DownloadVisualize
BU of 4ccy by Molmil
Crystal structure of carboxylesterase CesB (YbfK) from Bacillus subtilis
分子名称: CARBOXYLESTERASE YBFK, SODIUM ION
著者Rozeboom, H.J, Godinho, L.F, Nardini, M, Quax, W.J, Dijkstra, B.W.
登録日2013-10-29
公開日2014-01-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal Structures of Two Bacillus Carboxylesterases with Different Enantioselectivities.
Biochim.Biophys.Acta, 1844, 2014
4CCW
DownloadVisualize
BU of 4ccw by Molmil
Crystal structure of naproxen esterase (carboxylesterase NP) from Bacillus subtilis
分子名称: (2-hydroxyethoxy)acetic acid, CARBOXYL ESTERASE NP
著者Rozeboom, H.J, Godinho, L.F, Nardini, M, Quax, W.J, Dijkstra, B.W.
登録日2013-10-29
公開日2014-01-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structures of Two Bacillus Carboxylesterases with Different Enantioselectivities.
Biochim.Biophys.Acta, 1844, 2014
7OG2
DownloadVisualize
BU of 7og2 by Molmil
Crystal structure of Pseudoalteromonas luteoviolacea L-amino acid oxidase
分子名称: Amine oxidoreductase, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Rozeboom, H.J, Savino, S, Fraaije, M.W.
登録日2021-05-06
公開日2021-11-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Kinetic and Structural Properties of a Robust Bacterial L-Amino Acid Oxidase
Catalysts, 2021
5OX2
DownloadVisualize
BU of 5ox2 by Molmil
Crystal structure of thymoligase, a substrate-tailored peptiligase variant
分子名称: Fragment of prodomain, SULFATE ION, Subtilisin BPN'
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-09-05
公開日2018-01-10
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Design of a substrate-tailored peptiligase variant for the efficient synthesis of thymosin-alpha1.
Org. Biomol. Chem., 16, 2018
3BMV
DownloadVisualize
BU of 3bmv by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P
分子名称: CALCIUM ION, Cyclomaltodextrin glucanotransferase, GLYCEROL, ...
著者Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
登録日2007-12-13
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
3BMW
DownloadVisualize
BU of 3bmw by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P complexed with a maltoheptaose inhibitor
分子名称: 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, CALCIUM ION, CHLORIDE ION, ...
著者Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
登録日2007-12-13
公開日2008-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
6YRA
DownloadVisualize
BU of 6yra by Molmil
Crystal structure of ATP-dependent caprolactamase from Pseudomonas jessenii
分子名称: 5-oxoprolinase, Hydantoinase, ZINC ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2020-04-20
公開日2021-04-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Catalytic and structural properties of ATP-dependent caprolactamase from Pseudomonas jessenii.
Proteins, 89, 2021
6QZO
DownloadVisualize
BU of 6qzo by Molmil
Crystal structure of DyP-type peroxidase from Cellulomonas bogoriensis
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Peroxidase, TRIETHYLENE GLYCOL
著者Rozeboom, H.J, Fraaije, M.W.
登録日2019-03-12
公開日2019-04-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Characterization of a New DyP-Peroxidase from the Alkaliphilic Cellulomonad, Cellulomonas bogoriensis.
Molecules, 24, 2019
8P2B
DownloadVisualize
BU of 8p2b by Molmil
Crystal structure of CbFMN4 domain 1
分子名称: Clostridiaceae bacterium FMN4 domain 1, FLAVIN MONONUCLEOTIDE
著者Rozeboom, H.J, Fraaije, M.W.
登録日2023-05-15
公開日2023-07-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8P2A
DownloadVisualize
BU of 8p2a by Molmil
Crystal structure of SaFMN3 domain 2
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding domain-containing protein
著者Rozeboom, H.J, Fraaije, M.W.
登録日2023-05-15
公開日2023-07-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8Q5G
DownloadVisualize
BU of 8q5g by Molmil
Crystal structure of nitroreductase from Bacillus tequilensis with covalent FMN
分子名称: FLAVIN MONONUCLEOTIDE, NAD(P)H-dependent oxidoreductase
著者Rozeboom, H.J, Fraaije, M.W.
登録日2023-08-09
公開日2023-11-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
8Q5F
DownloadVisualize
BU of 8q5f by Molmil
Crystal structure of miniSOG protein from Arabidopsis thaliana with covalent FMN
分子名称: FLAVIN MONONUCLEOTIDE, miniSOG
著者Rozeboom, H.J, Fraaije, M.W.
登録日2023-08-09
公開日2023-11-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
8Q5E
DownloadVisualize
BU of 8q5e by Molmil
Crystal structure of PpSB1-LOV protein from Pseudomonas putida with covalent FMN
分子名称: FLAVIN MONONUCLEOTIDE, NICKEL (II) ION, Sensory box protein
著者Rozeboom, H.J, Fraaije, M.W.
登録日2023-08-09
公開日2023-11-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
6Z1X
DownloadVisualize
BU of 6z1x by Molmil
Crystal structure of human steroid carrier protein SL (SCP-2L) mutant V83C
分子名称: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2020-05-14
公開日2021-03-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon