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7SP5
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BU of 7sp5 by Molmil
Crystal Structure of a Eukaryotic Phosphate Transporter
分子名称: PHOSPHATE ION, Phosphate transporter, nonyl beta-D-glucopyranoside
著者Stroud, R.M, Pedersen, B.P, Kumar, H, Waight, A.B, Risenmay, A.J, Roe-Zurz, Z, Chau, B.H, Schlessinger, A, Bonomi, M, Harries, W, Sali, A, Johri, A.K, Finer-Moore, J.
登録日2021-11-02
公開日2021-11-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a eukaryotic phosphate transporter.
Nature, 496, 2013
6H7D
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BU of 6h7d by Molmil
Crystal Structure of A. thaliana Sugar Transport Protein 10 in complex with glucose in the outward occluded state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, PHOSPHATE ION, ...
著者Pedersen, B.P, Paulsen, P.A, Custodio, T.F.
登録日2018-07-31
公開日2019-02-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the plant symporter STP10 illuminates sugar uptake mechanism in monosaccharide transporter superfamily.
Nat Commun, 10, 2019
6THA
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BU of 6tha by Molmil
Crystal structure of human sugar transporter GLUT1 (SLC2A1) in the inward conformation
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, Solute carrier family 2, ...
著者Pedersen, B.P, Paulsen, P.A, Custodio, T.F.
登録日2019-11-19
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural comparison of GLUT1 to GLUT3 reveal transport regulation mechanism in sugar porter family.
Life Sci Alliance, 4, 2021
5KSD
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BU of 5ksd by Molmil
Crystal Structure of a Plasma Membrane Proton Pump
分子名称: ATPase 2, plasma membrane-type, DODECYL-BETA-D-MALTOSIDE, ...
著者Croll, T, Pedersen, B.P, Nissen, P.
登録日2016-07-08
公開日2016-08-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Improved Model of Proton Pump Crystal Structure Obtained by Interactive Molecular Dynamics Flexible Fitting Expands the Mechanistic Model for Proton Translocation in P-Type ATPases.
Front Physiol, 8, 2017
7BH1
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BU of 7bh1 by Molmil
Cryo-EM Structure of KdpFABC in E1 state with K
分子名称: (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
著者Sweet, M.E, Larsen, C, Pedersen, B.P, Stokes, D.L.
登録日2021-01-09
公開日2021-01-27
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural basis for potassium transport in prokaryotes by KdpFABC.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BH2
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BU of 7bh2 by Molmil
Cryo-EM Structure of KdpFABC in E2Pi state with BeF3 and K+
分子名称: (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Sweet, M.E, Larsen, C, Pedersen, B.P, Stokes, D.L.
登録日2021-01-09
公開日2021-01-27
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for potassium transport in prokaryotes by KdpFABC.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BGY
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BU of 7bgy by Molmil
Cryo-EM Structure of KdpFABC in E2Pi state with MgF4
分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, MAGNESIUM ION, ...
著者Sweet, M.E, Larsen, C, Pedersen, B.P, Stokes, D.L.
登録日2021-01-09
公開日2021-01-27
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for potassium transport in prokaryotes by KdpFABC.
Proc.Natl.Acad.Sci.USA, 118, 2021
8BB6
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BU of 8bb6 by Molmil
Crystal structure of Arabidopsis thaliana sucrose transporter SUC1
分子名称: Sucrose transport protein SUC1
著者Bavnhoej, L, Pedersen, B.P.
登録日2022-10-12
公開日2023-05-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structure and sucrose binding mechanism of the plant SUC1 sucrose transporter.
Nat.Plants, 9, 2023
9F41
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BU of 9f41 by Molmil
Crystal structure of the NTD domain from S. cerevisia Niemann-Pick type C protein NCR1 with cholesterol bound
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHOLESTEROL, DI(HYDROXYETHYL)ETHER, ...
著者Nel, L, Olesen, E, Frain, K.M, Pedersen, B.P.
登録日2024-04-26
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural and biochemical analysis of ligand binding in yeast Niemann-Pick type C 1-related protein
To Be Published
9F40
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BU of 9f40 by Molmil
Crystal structure of the NTD domain from S. cerevisia Niemann-Pick type C protein NCR1 with ergosterol bound
分子名称: ACETONITRILE, DI(HYDROXYETHYL)ETHER, ERGOSTEROL, ...
著者Nel, L, Olesen, E, Frain, K.M, Pedersen, B.P.
登録日2024-04-26
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural and biochemical analysis of ligand binding in yeast Niemann-Pick type C 1-related protein
To Be Published
9F63
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BU of 9f63 by Molmil
Crystal structure of Saccharomyces cerevisiae pH nine-sensitive protein 1 (PNS1)
分子名称: Protein PNS1
著者Driller, J.H, Pedersen, B.P.
登録日2024-04-30
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献S. cerevisiae pH nine-sensitive protein 1 is not a choline transporter.
To Be Published
5MRW
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BU of 5mrw by Molmil
Structure of the KdpFABC complex
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
著者Huang, C, Pedersen, B.P, Stokes, D.L.
登録日2016-12-27
公開日2017-06-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the potassium-importing KdpFABC membrane complex.
Nature, 546, 2017
3KDP
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BU of 3kdp by Molmil
Crystal structure of the sodium-potassium pump
分子名称: CHOLESTEROL, MAGNESIUM ION, Na+/K+ ATPase gamma subunit transcript variant a, ...
著者Morth, J.P, Pedersen, B.P, Nissen, P.
登録日2009-10-23
公開日2010-02-16
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of the sodium-potassium pump.
Nature, 450, 2007
5EQH
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BU of 5eqh by Molmil
Human GLUT1 in complex with inhibitor (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide
分子名称: (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1
著者Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
登録日2015-11-12
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EQG
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BU of 5eqg by Molmil
Human GLUT1 in complex with inhibitor (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide
分子名称: (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1
著者Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
登録日2015-11-12
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EQI
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BU of 5eqi by Molmil
Human GLUT1 in complex with Cytochalasin B
分子名称: Cytochalasin B, Solute carrier family 2, facilitated glucose transporter member 1
著者Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
登録日2015-11-12
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
4BYG
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BU of 4byg by Molmil
ATPase crystal structure
分子名称: COPPER EFFLUX ATPASE, MAGNESIUM ION, POLYETHYLENE GLYCOL (N=34), ...
著者Mattle, D, Drachmann, N.D, Liu, X.Y, Pedersen, B.P, Morth, J.P, Wang, J, Gourdon, P, Nissen, P.
登録日2013-07-19
公開日2014-08-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Dephosphorylation of Pib-Type Cu(I)-Atpases as Studied by Metallofluoride Complexes
To be Published
4BEV
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BU of 4bev by Molmil
ATPase crystal structure with bound phosphate analogue
分子名称: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
著者Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
登録日2013-03-12
公開日2014-04-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.583 Å)
主引用文献ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
7AAR
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BU of 7aar by Molmil
sugar/H+ symporter STP10 in inward open conformation
分子名称: CHLORIDE ION, Octyl Glucose Neopentyl Glycol, Sugar transport protein 10, ...
著者Bavnhoej, L, Paulsen, P.A, Pedersen, B.P.
登録日2020-09-04
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10.
Nat.Plants, 7, 2021
7AAQ
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sugar/H+ symporter STP10 in outward occluded conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, ACETATE ION, ...
著者Bavnhoej, L, Paulsen, P.A, Pedersen, B.P.
登録日2020-09-04
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10.
Nat.Plants, 7, 2021
7LC3
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CryoEM Structure of KdpFABC in E1-ATP state
分子名称: (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Sweet, M.E, Larsen, C, Pedersen, B.P, Stokes, D.L.
登録日2021-01-09
公開日2021-01-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural basis for potassium transport in prokaryotes by KdpFABC.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LC6
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Cryo-EM Structure of KdpFABC in E2-P state with BeF3
分子名称: (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, MAGNESIUM ION, POTASSIUM ION, ...
著者Sweet, M.E, Larsen, C, Pedersen, B.P, Stokes, D.L.
登録日2021-01-09
公開日2021-01-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis for potassium transport in prokaryotes by KdpFABC.
Proc.Natl.Acad.Sci.USA, 118, 2021
7QPA
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BU of 7qpa by Molmil
Outward-facing auxin bound form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1H-INDOL-3-YLACETIC ACID, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
7QP9
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Outward-facing apo-form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
7QPC
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Inward-facing NPA bound form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(naphthalen-1-ylcarbamoyl)benzoic acid, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022

 

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