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3MFK
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BU of 3mfk by Molmil
Ets1 complex with stromelysin-1 promoter DNA
分子名称: Protein C-ets-1, stromelysin-1 promoter DNA
著者Babayeva, N.D, Mino, K, Tahirov, T.H.
登録日2010-04-02
公開日2010-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA.
Cell Cycle, 9, 2010
1WKV
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BU of 1wkv by Molmil
Crystal structure of O-phosphoserine sulfhydrylase
分子名称: ACETATE ION, PYRIDOXAL-5'-PHOSPHATE, cysteine synthase
著者Oda, Y, Mino, K, Ishikawa, K, Ataka, M.
登録日2004-06-09
公開日2005-06-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Three-dimensional Structure of a New Enzyme, O-Phosphoserine Sulfhydrylase, involved in l-Cysteine Biosynthesis by a Hyperthermophilic Archaeon, Aeropyrum pernix K1, at 2.0A Resolution
J.Mol.Biol., 351, 2005
7VNX
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BU of 7vnx by Molmil
Crystal structure of TkArkI
分子名称: GUANOSINE, TkArkI
著者Yamashita, S, Minowa, K, Ohira, T, Suzuki, T, Tomita, K.
登録日2021-10-12
公開日2022-05-04
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
7VTJ
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BU of 7vtj by Molmil
The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
分子名称: Heavy chain of Fab, Light chain of Fab, VQIIYK peptide
著者Tsuchida, T, Fukuhara, N, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, Y, Ishida, T, Tomoo, K.
登録日2021-10-29
公開日2022-11-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
To Be Published
7FGK
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BU of 7fgk by Molmil
The Fab antibody single structure against tau protein.
分子名称: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
著者Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
登録日2021-07-27
公開日2022-07-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein.
To Be Published
7FGJ
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BU of 7fgj by Molmil
The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.
分子名称: CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ...
著者Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
登録日2021-07-27
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain.
To Be Published
7FGR
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BU of 7fgr by Molmil
The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
分子名称: AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ...
著者Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
登録日2021-07-27
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
To Be Published
3WFL
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BU of 3wfl by Molmil
Crtstal structure of glycoside hydrolase family 5 beta-mannanase from Talaromyces trachyspermus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Suzuki, K, Ichinose, H, Kamino, K, Ogasawara, W, Kaneko, S, Fushinobu, S.
登録日2013-07-19
公開日2014-07-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Purification, cloning, functional expression, structure, and characterization of a thermostable beta-mannanase from Talaromyces trachyspermus and its efficiency in production of mannooligosaccharides from coffee wastes
To be Published
4L0Y
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BU of 4l0y by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 1)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Protein C-ets-1, ...
著者Tahirov, T.H.
登録日2013-06-01
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
4L18
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BU of 4l18 by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 3)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', GLYCEROL, ...
著者Tahirov, T.H.
登録日2013-06-02
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
4L0Z
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BU of 4l0z by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 2)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Protein C-ets-1, ...
著者Tahirov, T.H.
登録日2013-06-01
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
5B36
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BU of 5b36 by Molmil
Crystal Structure of the O-Phosphoserine Sulfhydrylase from Aeropyrum pernix Complexed with Cysteine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYSTEINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Nakamura, T, Takeda, E, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2016-02-10
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Role of F225 in O-phosphoserine sulfhydrylase from Aeropyrum pernix K1
Extremophiles, 20, 2016
5B3A
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BU of 5b3a by Molmil
Crystal Structure of O-Phoshoserine Sulfhydrylase from Aeropyrum pernix in Complexed with the alpha-Aminoacrylate Intermediate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, Protein CysO
著者Nakamura, T, Takeda, E, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2016-02-12
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Role of F225 in O-phosphoserine sulfhydrylase from Aeropyrum pernix K1
Extremophiles, 20, 2016
3QHM
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BU of 3qhm by Molmil
Crystal analysis of the complex structure, E342A-cellotetraose, of endocellulase from pyrococcus horikoshii
分子名称: 458aa long hypothetical endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Kim, H.-W, Ishikawa, K.
登録日2011-01-26
公開日2012-02-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Functional analysis of hyperthermophilic endocellulase from Pyrococcus horikoshii by crystallographic snapshots
Biochem.J., 437, 2011
3QHO
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BU of 3qho by Molmil
Crystal analysis of the complex structure, Y299F-cellotetraose, of endocellulase from pyrococcus horikoshii
分子名称: 458aa long hypothetical endo-1,4-beta-glucanase, PHOSPHATE ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Kim, H.-W, Ishikawa, K.
登録日2011-01-26
公開日2012-02-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Functional analysis of hyperthermophilic endocellulase from Pyrococcus horikoshii by crystallographic snapshots
Biochem.J., 437, 2011
3QHN
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BU of 3qhn by Molmil
Crystal analysis of the complex structure, E201A-cellotetraose, of endocellulase from pyrococcus horikoshii
分子名称: 458aa long hypothetical endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Kim, H.-W, Ishikawa, K.
登録日2011-01-26
公開日2012-02-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Functional analysis of hyperthermophilic endocellulase from Pyrococcus horikoshii by crystallographic snapshots
Biochem.J., 437, 2011
3RI4
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BU of 3ri4 by Molmil
Ets1 cooperative binding to widely separated sites on promoter DNA
分子名称: Isoform Ets-1 p27 of Protein C-ets-1, TCR alpha promoter DNA
著者Babayeva, N.D, Mino, K, Tahirov, T.H.
登録日2011-04-12
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of ets1 cooperative binding to widely separated sites on promoter DNA.
Plos One, 7, 2012
3VSD
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BU of 3vsd by Molmil
Crystal Structure of the K127A Mutant of O-Phosphoserine Sulfhydrylase Complexed with External Schiff Base of Pyridoxal 5'-Phosphate with O-Acetyl-L-Serine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, O-ACETYLSERINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Nakamura, T, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2012-04-24
公開日2012-05-16
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural analysis of the substrate recognition mechanism in O-phosphoserine sulfhydrylase from the hyperthermophilic archaeon Aeropyrum pernix K1
J.Mol.Biol., 422, 2012
3VSC
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BU of 3vsc by Molmil
Crystal Structure of the K127A Mutant of O-Phosphoserine Sulfhydrylase Complexed with External Schiff Base of Pyridoxal 5'-Phosphate with O-Phospho-L-Serine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHOSERINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Nakamura, T, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2012-04-24
公開日2012-05-16
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural analysis of the substrate recognition mechanism in O-phosphoserine sulfhydrylase from the hyperthermophilic archaeon Aeropyrum pernix K1
J.Mol.Biol., 422, 2012
3VSA
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BU of 3vsa by Molmil
Crystal Structure of O-phosphoserine sulfhydrylase without acetate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PYRIDOXAL-5'-PHOSPHATE, Protein CysO
著者Nakamura, T, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2012-04-24
公開日2012-05-16
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural analysis of the substrate recognition mechanism in O-phosphoserine sulfhydrylase from the hyperthermophilic archaeon Aeropyrum pernix K1
J.Mol.Biol., 422, 2012
7VNV
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BU of 7vnv by Molmil
Crystal Structure of tRNAVal from Sulfolobus Tokodaii
分子名称: RNA (78-MER)
著者Yamashita, S, Ohira, T, Suzuki, T, Tomtia, K.
登録日2021-10-12
公開日2022-05-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
7VNW
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BU of 7vnw by Molmil
Crystal Structure of tRNAVal from Sulfolobus Tokodaii(Dephosphorylated)
分子名称: RNA (78-MER)
著者Yamashita, S, Ohira, T, Suzuki, T, Tomtia, K.
登録日2021-10-12
公開日2022-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
6LRA
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BU of 6lra by Molmil
The complex structure of PHF core domain peptide of tau and antibody's Fab domain.
分子名称: Fab Heavy Chain, Fab Light Chain, VQIINK
著者Tomohiro, T, Kouki, S, Tomohiro, S, Takahiro, T, Katsushiro, M, Yasuko, I, Katsuhiko, M, Taizo, T, Toshimitsu, I, Koji, T.
登録日2020-01-15
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the human tau PHF core domain VQIINK complexed with the Fab domain of monoclonal antibody Tau2r3.
Febs Lett., 2020
6F6O
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BU of 6f6o by Molmil
Structure of Adenovirus 3 fiber head V239D mutant
分子名称: Fiber protein
著者Zubieta, C, Fender, P, Stermann, E, Lieber, A.
登録日2017-12-05
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Preclinical safety and efficacy studies with an affinity-enhanced epithelial junction opener and PEGylated liposomal doxorubicin.
Mol Ther Methods Clin Dev, 2, 2015
4ZDG
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BU of 4zdg by Molmil
Structure of the Adenovirus 14p1 knob domain
分子名称: Fiber protein
著者Fender, P, Ducournau, C, Zubieta, C.
登録日2015-04-17
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Intracellular Signaling and Desmoglein 2 Shedding Triggered by Human Adenoviruses Ad3, Ad14, and Ad14P1.
J.Virol., 89, 2015

 

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