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BU of 4ybg by Molmil

Crystal structure of the MAEL domain of Drosophila melanogaster Maelstrom
分子名称:	1,2-ETHANEDIOL, ACETATE ION, Protein maelstrom, ...
著者	Matsumoto, N, Ishitani, R, Nishimasu, H, Nureki, O.
登録日	2015-02-18
公開日	2015-04-29
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (1.602 Å)
主引用文献	Crystal Structure and Activity of the Endoribonuclease Domain of the piRNA Pathway Factor Maelstrom Cell Rep, 11, 2015

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BU of 5guh by Molmil

Crystal structure of silkworm PIWI-clade Argonaute Siwi bound to piRNA
分子名称:	MAGNESIUM ION, PIWI, RNA (28-MER)
著者	Matsumoto, N, Nishimasu, H, Ishitani, R, Nureki, O.
登録日	2016-08-29
公開日	2016-10-19
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA Cell, 167, 2016

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BU of 4ym6 by Molmil

Crystal structure of the human nucleosome containing 6-4PP (outside)
分子名称:	145-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者	Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H.
登録日	2015-03-06
公開日	2015-12-02
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (3.514 Å)
主引用文献	Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome Sci Rep, 5, 2015

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BU of 4ym5 by Molmil

Crystal structure of the human nucleosome containing 6-4PP (inside)
分子名称:	144 mer-DNA, 144-mer DNA, Histone H2A type 1-B/E, ...
著者	Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H.
登録日	2015-03-06
公開日	2015-12-02
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (4.005 Å)
主引用文献	Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome Sci Rep, 5, 2015

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BU of 2zyk by Molmil

Crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin
分子名称:	Cyclooctakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
著者	Tonozuka, T, Sogawa, A, Yamada, M, Matsumoto, N, Yoshida, H, Kamitori, S, Ichikawa, K, Mizuno, M, Nishikawa, A, Sakano, Y.
登録日	2009-01-26
公開日	2009-02-10
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Structural basis for cyclodextrin recognition by Thermoactinomyces vulgaris cyclo/maltodextrin-binding protein Febs J., 274, 2007

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BU of 3vyj by Molmil

Crystal structure of C-type lectin domain of murine dendritic cell inhibitory receptor 2 (apo form)
分子名称:	C-type lectin domain family 4, member a4, SULFATE ION
著者	Nagae, M, Yamanaka, K, Hanashima, S, Ikeda, A, Satoh, T, Matsumoto, N, Yamamoto, K, Yamaguchi, Y.
登録日	2012-09-26
公開日	2013-10-02
最終更新日	2013-12-11
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	Recognition of Bisecting N-Acetylglucosamine: STRUCTURAL BASIS FOR ASYMMETRIC INTERACTION WITH THE MOUSE LECTIN DENDRITIC CELL INHIBITORY RECEPTOR 2 J.Biol.Chem., 288, 2013

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BU of 3vyk by Molmil

Crystal structure of C-type lectin domain of murine dendritic cell inhibitory receptor 2 in complex with N-glycan
分子名称:	1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]methyl alpha-D-mannopyranoside, C-type lectin domain family 4, ...
著者	Nagae, M, Yamanaka, K, Hanashima, S, Ikeda, A, Satoh, T, Matsumoto, N, Yamamoto, K, Yamaguchi, Y.
登録日	2012-09-26
公開日	2013-10-02
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Recognition of Bisecting N-Acetylglucosamine: STRUCTURAL BASIS FOR ASYMMETRIC INTERACTION WITH THE MOUSE LECTIN DENDRITIC CELL INHIBITORY RECEPTOR 2 J.Biol.Chem., 288, 2013

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BU of 3wbq by Molmil

Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-2)
分子名称:	C-type lectin domain family 4 member C
著者	Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y.
登録日	2013-05-20
公開日	2013-12-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer. Proteins, 82, 2014

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BU of 3wbp by Molmil

Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-1)
分子名称:	1,2-ETHANEDIOL, C-type lectin domain family 4 member C
著者	Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y.
登録日	2013-05-20
公開日	2013-12-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer. Proteins, 82, 2014

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BU of 3wbr by Molmil

Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-3)
分子名称:	C-type lectin domain family 4 member C
著者	Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y.
登録日	2013-05-20
公開日	2013-12-25
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer. Proteins, 82, 2014

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BU of 2zyo by Molmil

Crystal structure of cyclo/maltodextrin-binding protein complexed with maltotetraose
分子名称:	alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, solute-binding protein
著者	Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日	2009-01-27
公開日	2009-03-31
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein Febs J., 276, 2009

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BU of 2zym by Molmil

Crystal structure of cyclo/maltodextrin-binding protein complexed with alpha-cyclodextrin
分子名称:	Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
著者	Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日	2009-01-27
公開日	2009-03-31
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein Febs J., 276, 2009

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BU of 2zyn by Molmil

Crystal structure of cyclo/maltodextrin-binding protein complexed with beta-cyclodextrin
分子名称:	Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
著者	Matsumoto, M, Yamada, M, Kurakata, Y, Yoshida, H, Kamitori, S, Nishikawa, A, Tonozuka, T.
登録日	2009-01-27
公開日	2009-03-31
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Crystal structures of open and closed forms of cyclo/maltodextrin-binding protein Febs J., 276, 2009

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BU of 6a97 by Molmil

Crystal structure of MHC-like MILL2
分子名称:	Beta-2-microglobulin, MHC I-like leukocyte 2 long form, SULFATE ION
著者	Kajikawa, M, Ose, T, Maenaka, K.
登録日	2018-07-11
公開日	2018-12-05
実験手法	X-RAY DIFFRACTION (2.148 Å)
主引用文献	Structure of MHC class I-like MILL2 reveals heparan-sulfate binding and interdomain flexibility. Nat Commun, 9, 2018

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BU of 6kr6 by Molmil

Crystal structure of Drosophila Piwi
分子名称:	MERCURY (II) ION, Protein piwi, ZINC ION, ...
著者	Yamaguchi, S, Oe, A, Yamashita, K, Hirano, S, Mastumoto, N, Ishitani, R, Nishimasu, H, Nureki, O.
登録日	2019-08-21
公開日	2020-02-19
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Crystal structure of Drosophila Piwi. Nat Commun, 11, 2020

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BU of 5b1w by Molmil

Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain in ligand-free form
分子名称:	C-type lectin domain family 4 member A, CALCIUM ION
著者	Nagae, M, Yamaguchi, Y.
登録日	2015-12-21
公開日	2016-05-11
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (3.05 Å)
主引用文献	Crystal structure of human dendritic cell inhibitory receptor C-type lectin domain reveals the binding mode with N-glycan Febs Lett., 590, 2016

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BU of 5b1x by Molmil

Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain in complex with biantennary glycan
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, C-type lectin domain family 4 member A, CALCIUM ION
著者	Nagae, M, Yamaguchi, Y.
登録日	2015-12-21
公開日	2016-05-11
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.902 Å)
主引用文献	Crystal structure of human dendritic cell inhibitory receptor C-type lectin domain reveals the binding mode with N-glycan Febs Lett., 590, 2016

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BU of 4gel by Molmil

Crystal structure of Zucchini
分子名称:	1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, PHOSPHATE ION, ...
著者	Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日	2012-08-02
公開日	2012-10-17
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.756 Å)
主引用文献	Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012

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BU of 4gen by Molmil

Crystal structure of Zucchini (monomer)
分子名称:	CHLORIDE ION, Mitochondrial cardiolipin hydrolase
著者	Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日	2012-08-02
公開日	2012-10-17
最終更新日	2017-11-15
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012

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BU of 4gem by Molmil

Crystal structure of Zucchini (K171A)
分子名称:	1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, ZINC ION
著者	Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日	2012-08-02
公開日	2012-10-17
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.206 Å)
主引用文献	Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012

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