5MWW
| Sigma1.1 domain of sigmaA from Bacillus subtilis | 分子名称: | RNA polymerase sigma factor SigA | 著者 | Zachrdla, M, Padrta, P, Rabatinova, A, Sanderova, H, Barvik, I, Krasny, L, Zidek, L. | 登録日 | 2017-01-20 | 公開日 | 2017-06-14 | 最終更新日 | 2024-06-19 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of domain 1.1 of the sigma (A) factor from Bacillus subtilis is preformed for binding to the RNA polymerase core. J. Biol. Chem., 292, 2017
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8BYR
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2KRC
| Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase | 分子名称: | DNA-directed RNA polymerase subunit delta | 著者 | Motackova, V, Sanderova, H, Zidek, L, Novacek, J, Padrta, P, Svenkova, A, Jonak, J, Krasny, L, Sklenar, V. | 登録日 | 2009-12-16 | 公開日 | 2010-04-07 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs Proteins, 78, 2010
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2M4K
| Solution structure of the delta subunit of RNA polymerase from Bacillus subtilis | 分子名称: | DNA-directed RNA polymerase subunit delta | 著者 | Papouskova, V, Novacek, J, Kaderavek, P, Zidek, L, Rabatinova, A, Sanderova, H, Krasny, L, Sklenar, V. | 登録日 | 2013-02-07 | 公開日 | 2013-10-09 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural Study of the Partially Disordered Full-Length delta Subunit of RNA Polymerase from Bacillus subtilis. Chembiochem, 14, 2013
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4NC7
| N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions | 分子名称: | 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, DNA-directed RNA polymerase subunit delta, NICKEL (II) ION | 著者 | Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. | 登録日 | 2013-10-24 | 公開日 | 2014-07-02 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
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4NC8
| N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions | 分子名称: | DNA-directed RNA polymerase subunit delta, NICKEL (II) ION | 著者 | Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. | 登録日 | 2013-10-24 | 公開日 | 2014-07-02 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.17 Å) | 主引用文献 | X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
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6EYD
| Structure of Mycobacterium smegmatis RNA polymerase Sigma-A holoenzyme | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Kouba, T, Barvik, I, Krasny, L. | 登録日 | 2017-11-11 | 公開日 | 2018-12-12 | 最終更新日 | 2024-05-15 | 実験手法 | ELECTRON MICROSCOPY (4.22 Å) | 主引用文献 | The Core and Holoenzyme Forms of RNA Polymerase fromMycobacterium smegmatis. J. Bacteriol., 201, 2019
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6F6W
| Structure of Mycobacterium smegmatis RNA polymerase core | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Kouba, T, Barvik, I, Krasny, L. | 登録日 | 2017-12-06 | 公開日 | 2018-12-19 | 最終更新日 | 2024-05-15 | 実験手法 | ELECTRON MICROSCOPY (3.81 Å) | 主引用文献 | The Core and Holoenzyme Forms of RNA Polymerase fromMycobacterium smegmatis. J. Bacteriol., 201, 2019
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6YYS
| Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State II, primary channel engaged and active site interfering | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Kouba, T, Koval, T, Krasny, L, Dohnalek, J. | 登録日 | 2020-05-05 | 公開日 | 2020-11-04 | 最終更新日 | 2024-07-10 | 実験手法 | ELECTRON MICROSCOPY (3.08 Å) | 主引用文献 | Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase. Nat Commun, 11, 2020
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6Z11
| Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State III, primary channel dis-engaged and active site interfering | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Kouba, T, Koval, T, Krasny, L, Dohnalek, J. | 登録日 | 2020-05-11 | 公開日 | 2020-11-04 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.36 Å) | 主引用文献 | HelD, a helicase-like protein from gram-positive bacteria
in complex with RNA polymerase To Be Published
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6YXU
| Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State I, primary channel engaged | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Kouba, T, Koval, T, Krasny, L, Dohnalek, J. | 登録日 | 2020-05-03 | 公開日 | 2020-11-04 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.08 Å) | 主引用文献 | Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase. Nat Commun, 11, 2020
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6VSX
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5D4D
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5D4C
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5D4E
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4NJC
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8R3G
| Central glycolytic genes regulator (CggR) bound to DNA operator | 分子名称: | Central glycolytic genes regulator, operator DNA | 著者 | Skerlova, J, Soltysova, M, Rezacova, P, Skubnik, K. | 登録日 | 2023-11-09 | 公開日 | 2024-06-19 | 最終更新日 | 2024-07-17 | 実験手法 | ELECTRON MICROSCOPY (4.4 Å) | 主引用文献 | Structural characterization of two prototypical repressors of SorC family reveals tetrameric assemblies on DNA and mechanism of function. Nucleic Acids Res., 52, 2024
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8R7Y
| Deoxyribonucleoside regulator DeoR in complex with the DNA operator | 分子名称: | Deoxyribonucleoside regulator, OL18 DNA operator, strand 1, ... | 著者 | Pachl, P, Soltysova, M, Rezacova, P. | 登録日 | 2023-11-27 | 公開日 | 2024-06-19 | 最終更新日 | 2024-07-17 | 実験手法 | X-RAY DIFFRACTION (3.7 Å) | 主引用文献 | Structural characterization of two prototypical repressors of SorC family reveals tetrameric assemblies on DNA and mechanism of function. Nucleic Acids Res., 52, 2024
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8R2M
| Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD N-terminal domain and an upstream-fork promoter fragment; State III conformation | 分子名称: | DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-11-06 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.44 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8QN8
| Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State II | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-09-25 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.14 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8QTI
| Mycobacterium smegnatis RNAP open promoter complex with SigmaA and RbpA | 分子名称: | DNA 50-mer non-template strand, DNA 50-mer template strand, DNA-directed RNA polymerase subunit alpha, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-10-12 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.09 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8QU6
| Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD and an upstream-fork promoter fragment | 分子名称: | DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-10-13 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.45 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8R3M
| Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD N-terminal, CO and PCh loop domain, and an upstream-fork promoter fragment; State III conformation | 分子名称: | DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-11-09 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.49 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8R6R
| Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA and open promoter DNA | 分子名称: | DNA 50-MER, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-11-22 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.89 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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8R6P
| Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA, HelD N-terminal domain and open promoter DNA | 分子名称: | DNA 50-MER, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | 登録日 | 2023-11-22 | 公開日 | 2024-10-02 | 実験手法 | ELECTRON MICROSCOPY (3.16 Å) | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD To Be Published
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