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8BMZ
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BU of 8bmz by Molmil
Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
分子名称: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BMY
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BU of 8bmy by Molmil
Bacteroides thetaiotaomicron surface lipoprotein bound to cyanocobalamin
分子名称: CHLORIDE ION, CYANOCOBALAMIN, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BN0
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BU of 8bn0 by Molmil
Bacteroides thetaiotaomicron surface protein BT1954 bound to
分子名称: CHLORIDE ION, COB(II)INAMIDE, CYANIDE ION, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BMX
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BU of 8bmx by Molmil
Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein
分子名称: Putative TonB-linked outer membrane receptor, YncE family protein
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-09-20
実験手法X-RAY DIFFRACTION (3.72 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8OKV
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BU of 8okv by Molmil
lipoprotein BT2095 from Bacteroides thetaiotamicron bound to cyanocobalamin CnCbl
分子名称: CYANOCOBALAMIN, Putative surface layer protein
著者Javier Abellon-Ruiz, J, van den Berg, B, Jana, K, Kleinekathofer, U, Silale, A, Frey, A.M, Basle, A, Trost, M.
登録日2023-03-29
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
5NUP
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BU of 5nup by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ABC transporter permease, DODECYL-BETA-D-MALTOSIDE, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUQ
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BU of 5nuq by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein F, Probable phospholipid-binding lipoprotein mlaA
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUO
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BU of 5nuo by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ABC transporter permease, Outer membrane protein F, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUR
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BU of 5nur by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(3-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
4V3H
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BU of 4v3h by Molmil
Crystal structure of CymA from Klebsiella oxytoca
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA PROTEIN, NITRATE ION
著者van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
登録日2014-10-18
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4V3G
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BU of 4v3g by Molmil
Crystal structure of CymA from Klebsiella oxytoca
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA PROTEIN
著者van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
登録日2014-10-18
公開日2015-06-03
最終更新日2018-02-21
実験手法X-RAY DIFFRACTION (2.513 Å)
主引用文献Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
7PDC
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BU of 7pdc by Molmil
The structure of the human tetrameric LL-37 peptide in a channel conformation
分子名称: CHLORIDE ION, Cathelicidin antimicrobial peptide
著者Zeth, K, Sancho-Vaello, E.
登録日2021-08-05
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The structure of the antimicrobial human cathelicidin LL-37 shows oligomerization and channel formation in the presence of membrane mimics.
Sci Rep, 10, 2020
5T3R
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BU of 5t3r by Molmil
Crystal structure of BT1762-1763
分子名称: MAGNESIUM ION, SODIUM ION, SusC homolog, ...
著者van den Berg, B.
登録日2016-08-26
公開日2016-12-14
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5T4Y
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BU of 5t4y by Molmil
Crystal structure of BT1762-1763
分子名称: MAGNESIUM ION, SusC homolog, SusD homolog
著者van den Berg, B.
登録日2016-08-30
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
6EUS
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BU of 6eus by Molmil
Crystal structure of the outer membrane channel DcaP of Acinetobacter baumannii
分子名称: DcaP-like protein
著者Zahn, M, van den Berg, B.
登録日2017-10-31
公開日2018-11-14
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Multidisciplinary Approach toward Identification of Antibiotic Scaffolds for Acinetobacter baumannii.
Structure, 27, 2019
8BLW
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BU of 8blw by Molmil
Vitamin B12 transporter BtuB1 with lipoprotein BtuG1 from B. theta
分子名称: Vitamin B12 transporter BtuB1, YncE family protein, beta-D-galactopyranose
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2022-11-10
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
4RJX
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BU of 4rjx by Molmil
Crystal structure of the OprO mutant protein F62Y/D114Y
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PHOSPHATE ION, Porin O
著者van den Berg, B.
登録日2014-10-11
公開日2015-10-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure, Dynamics, and Substrate Specificity of the OprO Porin from Pseudomonas aeruginosa.
Biophys.J., 109, 2015
4RJW
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BU of 4rjw by Molmil
Crystal structure of Pseudomonas aeruginosa OprO
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin O
著者van den Berg, B.
登録日2014-10-11
公開日2015-10-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure, Dynamics, and Substrate Specificity of the OprO Porin from Pseudomonas aeruginosa.
Biophys.J., 109, 2015
4D51
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BU of 4d51 by Molmil
Crystal structure of CymA from Klebsiella oxytoca
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA
著者van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
登録日2014-11-01
公開日2015-06-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4D5D
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BU of 4d5d by Molmil
Crystal structure of CymA from Klebsiella oxytoca
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
著者van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
登録日2014-11-03
公開日2015-06-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4D5B
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BU of 4d5b by Molmil
Crystal structure of CymA from Klebsiella oxytoca
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA, Cyclohexakis-(1-4)-(alpha-D-glucopyranose)
著者van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
登録日2014-11-03
公開日2015-06-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
8P97
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BU of 8p97 by Molmil
BtuB3G3 bound to cyanocobalamin with disordered EL8
分子名称: CYANOCOBALAMIN, Putative surface layer protein, TonB-dependent receptor
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2023-06-05
公開日2023-08-16
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8P98
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BtuB3G3 bound to cyanocobalamin with ordered EL8
分子名称: CYANOCOBALAMIN, Putative surface layer protein, Vitamin B12 transporter BtuB
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2023-06-05
公開日2023-08-16
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
5FQ4
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BU of 5fq4 by Molmil
Crystal structure of the lipoprotein BT2263 from Bacteroides thetaiotaomicron
分子名称: CALCIUM ION, PUTATIVE LIPOPROTEIN
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-04
公開日2016-12-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5FQ3
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Crystal structure of the lipoprotein BT2262 from Bacteroides thetaiotaomicron
分子名称: BT_2262
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-04
公開日2016-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017

 

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