Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2R62
DownloadVisualize
BU of 2r62 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH
分子名称: Cell division protease ftsH homolog
著者Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
登録日2007-09-05
公開日2008-09-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2R65
DownloadVisualize
BU of 2r65 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH ADP complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division protease ftsH homolog
著者Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
登録日2007-09-05
公開日2008-09-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2ECR
DownloadVisualize
BU of 2ecr by Molmil
Crystal structure of the ligand-free form of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
分子名称: flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
著者Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-02-13
公開日2008-01-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2ED4
DownloadVisualize
BU of 2ed4 by Molmil
Crystal structure of flavin reductase HpaC complexed with FAD and NAD
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygenae
著者Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-02-14
公開日2008-01-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2ECU
DownloadVisualize
BU of 2ecu by Molmil
Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, DODECAETHYLENE GLYCOL, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygnease
著者Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-02-14
公開日2008-01-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
7VTF
DownloadVisualize
BU of 7vtf by Molmil
cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.20203447 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTG
DownloadVisualize
BU of 7vtg by Molmil
Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A mutant from Escherichia coli strain B
分子名称: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89859128 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTD
DownloadVisualize
BU of 7vtd by Molmil
Unliganded structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: POTASSIUM ION, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1505487 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTE
DownloadVisualize
BU of 7vte by Molmil
uridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: POTASSIUM ION, Pseudouridine kinase, URIDINE
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15296578 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VVA
DownloadVisualize
BU of 7vva by Molmil
Pseudouridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-11-05
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75029182 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7DP2
DownloadVisualize
BU of 7dp2 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88F derived from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.40008736 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP0
DownloadVisualize
BU of 7dp0 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.10004139 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP1
DownloadVisualize
BU of 7dp1 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88A derived from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.003496 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
6AAE
DownloadVisualize
BU of 6aae by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136
分子名称: DI(HYDROXYETHYL)ETHER, Esterase, PENTAETHYLENE GLYCOL
著者Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
登録日2018-07-18
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.641 Å)
主引用文献Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
6IEY
DownloadVisualize
BU of 6iey by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136-Chloramphenicol complex
分子名称: CHLORAMPHENICOL, Esterase
著者Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
登録日2018-09-18
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
7C1Z
DownloadVisualize
BU of 7c1z by Molmil
ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PfkB-like carbohydrate kinase family protein, ...
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.09617043 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
7C1X
DownloadVisualize
BU of 7c1x by Molmil
Unliganded structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: PfkB-like carbohydrate kinase family protein, SODIUM ION
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.38942838 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
7C1Y
DownloadVisualize
BU of 7c1y by Molmil
Pseudouridine and ADP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, PfkB-like carbohydrate kinase family protein, ...
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.083426 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
4UZ0
DownloadVisualize
BU of 4uz0 by Molmil
Crystal Structure of apoptosis repressor with CARD (ARC)
分子名称: GLYCEROL, NUCLEOLAR PROTEIN 3
著者Kim, S.H, Jeong, J.H, Jang, T.H, Kim, Y.G, Park, H.H.
登録日2014-09-04
公開日2015-07-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
Sci.Rep., 5, 2015
1HPB
DownloadVisualize
BU of 1hpb by Molmil
THE BACTERIAL PERIPLASMIC HISTIDINE-BINDING PROTEIN: STRUCTURE(SLASH)FUNCTION ANALYSIS OF THE LIGAND-BINDING SITE AND COMPARISON WITH RELATED PROTEINS
分子名称: HISTIDINE, HISTIDINE-BINDING PROTEIN
著者Kim, S.H, Oh, B.H.
登録日1993-09-30
公開日1995-01-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The bacterial periplasmic histidine-binding protein. structure/function analysis of the ligand-binding site and comparison with related proteins.
J.Biol.Chem., 269, 1994
1U0L
DownloadVisualize
BU of 1u0l by Molmil
Crystal structure of YjeQ from Thermotoga maritima
分子名称: GUANOSINE-5'-DIPHOSPHATE, Probable GTPase engC, ZINC ION
著者Shin, D.H, Lou, Y, Jaru, J, Kim, R, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2004-07-13
公開日2004-09-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain
Proc.Natl.Acad.Sci.Usa, 101, 2004
1L7M
DownloadVisualize
BU of 1l7m by Molmil
HIGH RESOLUTION LIGANDED STRUCTURE OF PHOSPHOSERINE PHOSPHATASE (PI COMPLEX)
分子名称: MAGNESIUM ION, PHOSPHATE ION, Phosphoserine Phosphatase
著者Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-03-15
公開日2002-04-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1L7P
DownloadVisualize
BU of 1l7p by Molmil
SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE
分子名称: PHOSPHATE ION, PHOSPHOSERINE, PHOSPHOSERINE PHOSPHATASE
著者Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-03-16
公開日2002-06-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
2HY5
DownloadVisualize
BU of 2hy5 by Molmil
Crystal structure of DsrEFH
分子名称: DsrH, Intracellular sulfur oxidation protein dsrF, Putative sulfurtransferase dsrE
著者Shin, D.H, Schulte, A, Dahl, C, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2006-08-04
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structure of DsrEFH
To be Published
2NPA
DownloadVisualize
BU of 2npa by Molmil
the crystal structure of the human PPARaplpha ligand binding domain in complex with a a-hydroxyimino phenylpropanoic acid
分子名称: (2R,3E)-2-{4-[(5-METHYL-2-PHENYL-1,3-OXAZOL-4-YL)METHOXY]BENZYL}-3-(PROPOXYIMINO)BUTANOIC ACID, Peroxisome proliferator-activated receptor alpha, SRC- peptide from Nuclear receptor coactivator 1
著者Kim, K.H, Chung, H.K, Han, H.O, Kim, S.H, Koh, J.S, Kim, G.T.
登録日2006-10-26
公開日2007-10-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design and synthesis of oxime ethers of alpha-acyl-beta-phenylpropanoic acids as PPAR dual agonists
Bioorg.Med.Chem.Lett., 17, 2007

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon