7WH3
 
 | | Solution structure of human stomatin SPFH domain in a phosphate buffer | | 分子名称: | Stomatin | | 著者 | Kataoka, K, Tenno, T, Goda, N, Hibino, E, Hiroaki, H. | | 登録日 | 2021-12-29 | | 公開日 | 2022-06-08 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | A cryptic phosphate-binding pocket on the SPFH domain of human stomatin that regulates a novel fibril-like self-assembly
Curr Res Struct Biol, 4, 2022
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4E9S
 | | Multicopper Oxidase CueO (data5) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-03-21 | | 公開日 | 2013-05-01 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.06 Å) | | 主引用文献 | Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site.
J.Mol.Biol., 373, 2007
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4E9T
 | | Multicopper Oxidase CueO (data6) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-03-21 | | 公開日 | 2013-05-01 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site.
J.Mol.Biol., 373, 2007
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4E9Q
 | | Multicopper Oxidase CueO (data2) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-03-21 | | 公開日 | 2013-05-01 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site.
J.Mol.Biol., 373, 2007
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4E9R
 | | Multicopper Oxidase CueO (data4) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-03-21 | | 公開日 | 2013-05-01 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site.
J.Mol.Biol., 373, 2007
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4NER
 | | Multicopper Oxidase CueO (data1) | | 分子名称: | Blue copper oxidase CueO, COPPER (II) ION, HYDROXIDE ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2013-10-30 | | 公開日 | 2014-03-12 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
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1WS7
 | | Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini) | | 分子名称: | COPPER (I) ION, Mavicyanin | | 著者 | Xie, Y, Inoue, T, Miyamoto, Y, Matsumura, H, Kataoka, K, Yamaguchi, K, Nojini, M, Suzuki, S, Kai, Y. | | 登録日 | 2004-11-02 | | 公開日 | 2004-11-23 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structural reorganization of the copper binding site involving Thr15 of mavicyanin from Cucurbita pepo medullosa (zucchini) upon reduction.
J.Biochem.(Tokyo), 137, 2005
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8X37
 | | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP | | 分子名称: | DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, Neryl-diphosphate synthase 1 | | 著者 | Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S. | | 登録日 | 2023-11-12 | | 公開日 | 2024-02-07 | | 最終更新日 | 2024-04-24 | | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | | 主引用文献 | Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
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8X36
 | | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form B) | | 分子名称: | 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ... | | 著者 | Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S. | | 登録日 | 2023-11-12 | | 公開日 | 2024-02-07 | | 最終更新日 | 2024-04-24 | | 実験手法 | X-RAY DIFFRACTION (2.28 Å) | | 主引用文献 | Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
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8X35
 | | Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A) | | 分子名称: | 1,2-ETHANEDIOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ... | | 著者 | Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S. | | 登録日 | 2023-11-12 | | 公開日 | 2024-02-07 | | 最終更新日 | 2024-04-24 | | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | | 主引用文献 | Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
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1UAT
 | | The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J | | 分子名称: | Azurin iso-2, COPPER (II) ION, SULFATE ION | | 著者 | Inoue, T, Suzuki, S, Nisho, N, Yamaguchi, K, Kataoka, K, Tobari, J, Yong, X, Hamanaka, S, Matsumura, H, Kai, Y. | | 登録日 | 2003-03-19 | | 公開日 | 2004-03-30 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J
J.Mol.Biol., 333, 2003
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7BUR
 | | Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin | | 分子名称: | CITRIC ACID, Chalcone synthase 1, NARINGENIN | | 著者 | Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T. | | 登録日 | 2020-04-08 | | 公開日 | 2020-08-19 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.82 Å) | | 主引用文献 | Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
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7BUS
 | | Chalcone synthase from Glycine max (L.) Merr (soybean) | | 分子名称: | Chalcone synthase | | 著者 | Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T. | | 登録日 | 2020-04-08 | | 公開日 | 2020-08-19 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.52 Å) | | 主引用文献 | Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
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7VPC
 | | Neryl diphosphate synthase from Solanum lycopersicum | | 分子名称: | 1,2-ETHANEDIOL, D-MALATE, Neryl-diphosphate synthase 1 | | 著者 | Imaizumi, R, Misawa, S, Takeshita, K, Sakai, N, Yamamoto, M, Kataoka, K, Nakayama, T, Takahashi, S, Yamashita, S. | | 登録日 | 2021-10-15 | | 公開日 | 2022-05-18 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | Structure-based engineering of a short-chain cis-prenyltransferase to biosynthesize nonnatural all-cis-polyisoprenoids: molecular mechanisms for primer substrate recognition and ultimate product chain-length determination.
Febs J., 289, 2022
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1IXV
 | | Crystal Structure Analysis of homolog of oncoprotein gankyrin, an interactor of Rb and CDK4/6 | | 分子名称: | Probable 26S proteasome regulatory subunit p28 | | 著者 | Padmanabhan, B, Adachi, N, Kataoka, K, Horikoshi, M. | | 登録日 | 2002-07-09 | | 公開日 | 2003-12-16 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure of the homolog of the oncoprotein gankyrin, an interactor of Rb and CDK4/6
J.BIOL.CHEM., 279, 2004
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4HAK
 | | Multicopper Oxidase CueO mutant E506A | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-09-26 | | 公開日 | 2013-10-30 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Multicopper Oxidase CueO mutant E506A
TO BE PUBLISHED
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4HAL
 | | Multicopper Oxidase CueO mutant E506I | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2012-09-26 | | 公開日 | 2013-10-30 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Multicopper Oxidase CueO mutant E506I
TO BE PUBLISHED
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1WG3
 | | Structural analysis of yeast nucleosome-assembly factor CIA1p | | 分子名称: | Anti-silencing protein 1 | | 著者 | Padmanabhan, B, Kataoka, K, Umehara, T, Adachi, N, Yokoyama, S, Horikoshi, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2004-05-27 | | 公開日 | 2005-06-14 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3 Å) | | 主引用文献 | Structural Similarity between Histone Chaperone Cia1p/Asf1p and DNA-Binding Protein NF-{kappa}B
J.Biochem.(Tokyo), 138, 2005
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1CUO
 | | CRYSTAL STRUCTURE ANALYSIS OF ISOMER-2 AZURIN FROM METHYLOMONAS J | | 分子名称: | COPPER (II) ION, PROTEIN (AZURIN ISO-2) | | 著者 | Inoue, T, Nishio, N, Kai, Y, Suzuki, S, Kataoka, K. | | 登録日 | 1999-08-21 | | 公開日 | 2000-08-23 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J.
J.Mol.Biol., 333, 2003
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1BQ5
 | | NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051 | | 分子名称: | COPPER (II) ION, NITRITE REDUCTASE | | 著者 | Inoue, T, Gotowda, M, Deligeer, Suzuki, S, Kataoka, K, Yamaguchi, K, Watanabe, H, Goho, M, Yasushi, K.A.I. | | 登録日 | 1998-08-21 | | 公開日 | 1999-08-21 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | | 主引用文献 | Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.
J.Biochem.(Tokyo), 124, 1998
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3UAC
 | | Multicopper Oxidase CueO mutant C500SE506Q (data4) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAA
 | | Multicopper Oxidase CueO mutant C500SE506Q (data1) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAE
 | | Multicopper Oxidase CueO mutant C500SE506Q (data6) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAB
 | | Multicopper Oxidase CueO mutant C500SE506Q (data2) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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3UAD
 | | Multicopper Oxidase CueO mutant C500SE506Q (data5) | | 分子名称: | ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ... | | 著者 | Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y. | | 登録日 | 2011-10-21 | | 公開日 | 2012-04-11 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
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