1IQT
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![BU of 1iqt by Molmil](/molmil-images/mine/1iqt) | Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1) | 分子名称: | heterogeneous nuclear ribonucleoprotein D0 | 著者 | Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S. | 登録日 | 2001-08-01 | 公開日 | 2002-08-07 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA. J.Mol.Biol., 311, 2001
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2RQJ
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![BU of 2rqj by Molmil](/molmil-images/mine/2rqj) | Quadruplex structure of an RNA aptamer against bovine prion protein | 分子名称: | RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3') | 著者 | Katahira, M, Mashima, T, Matsugami, A, Nishikawa, F, Nishikawa, S. | 登録日 | 2009-07-18 | 公開日 | 2009-11-17 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Unique quadruplex structure and interaction of an RNA aptamer against bovine prion protein Nucleic Acids Res., 37, 2009
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1CP8
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![BU of 1cp8 by Molmil](/molmil-images/mine/1cp8) | NMR STRUCTURE OF DNA (5'-D(TTGGCCAA)2-3') COMPLEXED WITH NOVEL ANTITUMOR DRUG UCH9 | 分子名称: | 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYDROXY-7-(SEC-BUTYL)-ANTHRACENE, DNA (5'-D(P*TP*TP*GP*GP*CP*CP*AP*A)-3'), MAGNESIUM ION, ... | 著者 | Katahira, R, Katahira, M, Yamashita, Y, Ogawa, H, Kyogoku, Y, Yoshida, M. | 登録日 | 1999-06-11 | 公開日 | 1999-07-01 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the novel antitumor drug UCH9 complexed with d(TTGGCCAA)2 as determined by NMR. Nucleic Acids Res., 26, 1998
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1OZ8
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1X0F
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![BU of 1x0f by Molmil](/molmil-images/mine/1x0f) | Complex structure of the C-terminal RNA-binding domain of hnRNP D(AUF1) with telomeric DNA | 分子名称: | 5'-D(P*TP*AP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein D0 | 著者 | Enokizono, Y, Konishi, Y, Nagata, K, Ouhashi, K, Uesugi, S, Ishikawa, F, Katahira, M. | 登録日 | 2005-03-22 | 公開日 | 2005-04-05 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of hnRNP D complexed with single-stranded telomere DNA and unfolding of the quadruplex by heterogeneous nuclear ribonucleoprotein D. J.Biol.Chem., 280, 2005
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1UAW
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![BU of 1uaw by Molmil](/molmil-images/mine/1uaw) | Solution structure of the N-terminal RNA-binding domain of mouse Musashi1 | 分子名称: | mouse-musashi-1 | 著者 | Miyanoiri, Y, Kobayashi, H, Watanabe, M, Ikeda, T, Nagata, T, Okano, H, Uesugi, S, Katahira, M. | 登録日 | 2003-03-24 | 公開日 | 2004-03-24 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Origin of higher affinity to RNA of the N-terminal RNA-binding domain than that of the C-terminal one of a mouse neural protein, musashi1, as revealed by comparison of their structures, modes of interaction, surface electrostatic potentials, and backbone dynamics J.Biol.Chem., 278, 2003
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1WTB
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![BU of 1wtb by Molmil](/molmil-images/mine/1wtb) | Complex structure of the C-terminal RNA-binding domain of hnRNP D (AUF1) with telomere DNA | 分子名称: | 5'-D(P*TP*AP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein D0 | 著者 | Enokizono, Y, Konishi, Y, Nagata, K, Ouhashi, K, Uesugi, S, Ishikawa, F, Katahira, M. | 登録日 | 2004-11-22 | 公開日 | 2005-04-05 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of hnRNP D complexed with single-stranded telomere DNA and unfolding of the quadruplex by heterogeneous nuclear ribonucleoprotein D J.Biol.Chem., 280, 2005
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6J3G
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![BU of 6j3g by Molmil](/molmil-images/mine/6j3g) | Crystal structure of an apo form of the glutathione S-transferase, CsGST83044, of Ceriporiopsis subvermispora | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, Glutathione S-transferase, ... | 著者 | Osman, W.H.W, Mikami, B, Saka, N, Kondo, K, Nagata, T, Katahira, M. | 登録日 | 2019-01-04 | 公開日 | 2019-05-15 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Identification of key residues for activities of atypical glutathione S-transferase of Ceriporiopsis subvermispora, a selective degrader of lignin in woody biomass, by crystallography and functional mutagenesis. Int.J.Biol.Macromol., 132, 2019
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6J3H
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![BU of 6j3h by Molmil](/molmil-images/mine/6j3h) | Crystal structure of the glutathione S-transferase, CsGST83044, of Ceriporiopsis subvermispora in complex with glutathione | 分子名称: | GLUTATHIONE, Glutathione S-transferase | 著者 | Osman, W.H.W, Mikami, B, Saka, N, Kondo, K, Nagata, T, Katahira, M. | 登録日 | 2019-01-04 | 公開日 | 2019-05-15 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.19 Å) | 主引用文献 | Identification of key residues for activities of atypical glutathione S-transferase of Ceriporiopsis subvermispora, a selective degrader of lignin in woody biomass, by crystallography and functional mutagenesis. Int.J.Biol.Macromol., 132, 2019
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6J3F
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![BU of 6j3f by Molmil](/molmil-images/mine/6j3f) | Crystal structure of the glutathione S-transferase, CsGST63524, of Ceriporiopsis subvermispora in complex with glutathione | 分子名称: | 1,2-ETHANEDIOL, GLUTATHIONE, glutathione S-transferase | 著者 | Osman, W.H.W, Mikami, B, Saka, N, Kondo, K, Nagata, T, Katahira, M. | 登録日 | 2019-01-04 | 公開日 | 2019-02-27 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structure of a serine-type glutathione S-transferase of Ceriporiopsis subvermispora and identification of the enzymatically important non-canonical residues by functional mutagenesis. Biochem. Biophys. Res. Commun., 510, 2019
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7EXK
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![BU of 7exk by Molmil](/molmil-images/mine/7exk) | An AA9 LPMO of Ceriporiopsis subvermispora | 分子名称: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Nguyen, H, Kondo, K, Nagata, T, Katahira, M, Mikami, B. | 登録日 | 2021-05-27 | 公開日 | 2022-05-04 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.14 Å) | 主引用文献 | Functional and Structural Characterizations of Lytic Polysaccharide Monooxygenase, Which Cooperates Synergistically with Cellulases, from Ceriporiopsis subvermispora. Acs Sustain Chem Eng, 10, 2022
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6K84
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![BU of 6k84 by Molmil](/molmil-images/mine/6k84) | Structure of anti-prion RNA aptamer | 分子名称: | RNA (25-MER) | 著者 | Mashima, T, Lee, J.H, Hayashi, T, Nagata, T, Kinoshita, M, Katahira, M. | 登録日 | 2019-06-11 | 公開日 | 2020-04-01 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Development and structural determination of an anti-PrPCaptamer that blocks pathological conformational conversion of prion protein. Sci Rep, 10, 2020
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5X3Z
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![BU of 5x3z by Molmil](/molmil-images/mine/5x3z) | Solution structure of musashi1 RBD2 in complex with RNA | 分子名称: | RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1 | 著者 | Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M. | 登録日 | 2017-02-09 | 公開日 | 2017-12-13 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA Molecules, 22, 2017
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5X3Y
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![BU of 5x3y by Molmil](/molmil-images/mine/5x3y) | Refined solution structure of musashi1 RBD2 | 分子名称: | RNA-binding protein Musashi homolog 1 | 著者 | Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M. | 登録日 | 2017-02-09 | 公開日 | 2017-12-13 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA Molecules, 22, 2017
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2MST
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![BU of 2mst by Molmil](/molmil-images/mine/2mst) | MUSASHI1 RBD2, NMR | 分子名称: | PROTEIN (MUSASHI1) | 著者 | Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M. | 登録日 | 1999-05-19 | 公開日 | 2000-05-19 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1. J.Mol.Biol., 287, 1999
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2MSS
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![BU of 2mss by Molmil](/molmil-images/mine/2mss) | MUSASHI1 RBD2, NMR | 分子名称: | PROTEIN (MUSASHI1) | 著者 | Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M. | 登録日 | 1999-05-19 | 公開日 | 2000-05-19 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1. J.Mol.Biol., 287, 1999
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1HRA
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![BU of 1hra by Molmil](/molmil-images/mine/1hra) | THE SOLUTION STRUCTURE OF THE HUMAN RETINOIC ACID RECEPTOR-BETA DNA-BINDING DOMAIN | 分子名称: | RETINOIC ACID RECEPTOR, ZINC ION | 著者 | Knegtel, R.M.A, Katahira, M, Schilthuis, J.G, Bonvin, A.M.J.J, Boelens, R, Eib, D, Van Der Saag, P.T, Kaptein, R. | 登録日 | 1993-07-25 | 公開日 | 1994-01-31 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | The solution structure of the human retinoic acid receptor-beta DNA-binding domain. J.Biomol.NMR, 3, 1993
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1MYQ
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![BU of 1myq by Molmil](/molmil-images/mine/1myq) | An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction | 分子名称: | 5'-D(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3' | 著者 | Matsugami, A, Ouhashi, K, Kanagawa, M, Liu, H, Kanagawa, S, Uesugi, S, Katahira, M. | 登録日 | 2002-10-04 | 公開日 | 2002-10-23 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction. J.Mol.Biol., 313, 2001
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6J3E
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![BU of 6j3e by Molmil](/molmil-images/mine/6j3e) | Crystal structure of an apo form of the glutathione S-transferase, CsGST63524, of Ceriporiopsis subvermispora | 分子名称: | 1,2-ETHANEDIOL, glutathione S-transferase | 著者 | Osman, W.H.W, Mikami, B, Saka, N, Kondo, K, Nagata, T, Katahira, M. | 登録日 | 2019-01-04 | 公開日 | 2019-02-27 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.455 Å) | 主引用文献 | Structure of a serine-type glutathione S-transferase of Ceriporiopsis subvermispora and identification of the enzymatically important non-canonical residues by functional mutagenesis. Biochem. Biophys. Res. Commun., 510, 2019
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8IYB
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![BU of 8iyb by Molmil](/molmil-images/mine/8iyb) | Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, ... | 著者 | Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M. | 登録日 | 2023-04-04 | 公開日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii. Int.J.Biol.Macromol., 253, 2023
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8IYC
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![BU of 8iyc by Molmil](/molmil-images/mine/8iyc) | Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... | 著者 | Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M. | 登録日 | 2023-04-04 | 公開日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii. Int.J.Biol.Macromol., 253, 2023
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8IY8
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![BU of 8iy8 by Molmil](/molmil-images/mine/8iy8) | Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Feruloyl esterase | 著者 | Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M. | 登録日 | 2023-04-04 | 公開日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii. Int.J.Biol.Macromol., 253, 2023
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8JH8
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![BU of 8jh8 by Molmil](/molmil-images/mine/8jh8) | Structure-based characterization and improvement of an enzymatic activity of Acremonium alcalophilum feruloyl esterase | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Feruloyl esterase, ... | 著者 | Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M. | 登録日 | 2023-05-22 | 公開日 | 2024-04-17 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Structure-Based Characterization and Improvement of an Enzymatic Activity of Acremonium alcalophilum Feruloyl Esterase Acs Sustain Chem Eng, 12, 2024
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8JH9
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![BU of 8jh9 by Molmil](/molmil-images/mine/8jh9) | Structure-based characterization and improvement of an enzymatic activity of Acremonium alcalophilum feruloyl esterase | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, Feruloyl esterase with ferulic acid, ... | 著者 | Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M. | 登録日 | 2023-05-22 | 公開日 | 2024-04-17 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure-Based Characterization and Improvement of an Enzymatic Activity of Acremonium alcalophilum Feruloyl Esterase Acs Sustain Chem Eng, 12, 2024
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1MY9
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![BU of 1my9 by Molmil](/molmil-images/mine/1my9) | Solution structure of a K+ cation stabilized dimeric RNA quadruplex containing two G:G(:A):G:G(:A) hexads, G:G:G:G tetrads and UUUU loops | 分子名称: | 5'-R(*GP*GP*AP*GP*GP*UP*UP*UP*UP*GP*GP*AP*GP*G)-3' | 著者 | Liu, H, Matsugami, A, Katahira, M, Uesugi, S. | 登録日 | 2002-10-04 | 公開日 | 2003-10-07 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | A Dimeric RNA Quadruplex Architecture Comprised of Two G:G(:A):G:G(:A) Hexads, G:G:G:G Tetrads and UUUU Loops J.Mol.Biol., 322, 2002
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