Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HRF
DownloadVisualize
BU of 8hrf by Molmil
Catalytic domain of Vibrio parahaemolyticus chitinase 1
分子名称: ACETATE ION, CALCIUM ION, Chitinase
著者Nakamura, A.
登録日2022-12-15
公開日2023-12-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Catalytic domain of Vibrio parahaemolyticus chitinase 1
To Be Published
2AY5
DownloadVisualize
BU of 2ay5 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEPROPIONIC ACID
分子名称: AROMATIC AMINO ACID AMINOTRANSFERASE, INDOLYLPROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY7
DownloadVisualize
BU of 2ay7 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-PHENYLBUTYRIC ACID
分子名称: 4-PHENYL-BUTANOIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY2
DownloadVisualize
BU of 2ay2 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH CYCLOHEXANE PROPIONIC ACID
分子名称: AROMATIC AMINO ACID AMINOTRANSFERASE, CYCLOHEXANE PROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY3
DownloadVisualize
BU of 2ay3 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID
分子名称: 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY1
DownloadVisualize
BU of 2ay1 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-AMINOHYDROCINNAMIC ACID
分子名称: 4-AMINOHYDROCINNAMIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY6
DownloadVisualize
BU of 2ay6 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEBUTYRIC ACID
分子名称: 3-INDOLEBUTYRIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY4
DownloadVisualize
BU of 2ay4 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(P-TOLYL)PROPIONIC ACID
分子名称: 3-(P-TOLYL)PROPIONIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY9
DownloadVisualize
BU of 2ay9 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 5-PHENYLVALERIC ACID
分子名称: 5-PHENYLVALERIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY8
DownloadVisualize
BU of 2ay8 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-(2-THIENYL)BUTYRIC ACID
分子名称: 4-(2-THIENYL)BUTYRIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1998-08-06
公開日1999-02-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
1ART
DownloadVisualize
BU of 1art by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
分子名称: 2-methyl-L-aspartic acid, ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Higuchi, T, Hirotsu, K.
登録日1993-08-02
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
1AY4
DownloadVisualize
BU of 1ay4 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITHOUT SUBSTRATE
分子名称: AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1997-11-14
公開日1998-10-14
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY5
DownloadVisualize
BU of 1ay5 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH MALEATE
分子名称: AROMATIC AMINO ACID AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1997-11-14
公開日1998-10-14
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY8
DownloadVisualize
BU of 1ay8 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH 3-PHENYLPROPIONATE
分子名称: AROMATIC AMINO ACID AMINOTRANSFERASE, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Hirotsu, K, Kagamiyama, H.
登録日1997-11-14
公開日1998-10-14
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1ARS
DownloadVisualize
BU of 1ars by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Higuchi, T, Hirotsu, K.
登録日1993-08-02
公開日1994-08-31
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
9IZ4
DownloadVisualize
BU of 9iz4 by Molmil
Crystal structure of phosphonopyruvate decarboxylase RhiEF from Bacillus subtilis ATCC6633 in complex with thiamine pyrophosphate
分子名称: MAGNESIUM ION, Putative phosphonopyruvate decarboxylase alpha subunit, Putative phosphonopyruvate decarboxylase beta subunit, ...
著者Nakamura, A, Kojima, S.
登録日2024-07-31
公開日2024-12-18
最終更新日2025-01-01
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural Analysis of Phosphonopyruvate Decarboxylase RhiEF: First Insights into an Ancestral Heterooligomeric Thiamine Pyrophosphate-Dependent Decarboxylase.
Biochemistry, 63, 2024
9IZ3
DownloadVisualize
BU of 9iz3 by Molmil
Crystal structure of phosphonopyruvate decarboxylase RhiEF from Bacillus subtilis ATCC6633
分子名称: Putative phosphonopyruvate decarboxylase alpha subunit, Putative phosphonopyruvate decarboxylase beta subunit, SULFATE ION
著者Nakamura, A, Kojima, S.
登録日2024-07-31
公開日2024-12-18
最終更新日2025-01-01
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structural Analysis of Phosphonopyruvate Decarboxylase RhiEF: First Insights into an Ancestral Heterooligomeric Thiamine Pyrophosphate-Dependent Decarboxylase.
Biochemistry, 63, 2024
7CBD
DownloadVisualize
BU of 7cbd by Molmil
Catalytic domain of Cellulomonas fimi Cel6B
分子名称: Exoglucanase A
著者Nakamura, A, Ishiwata, D, Visootsat, A, Uchiyama, T, Mizutani, K, Kaneko, S, Murata, T, Igarashi, K, Iino, R.
登録日2020-06-12
公開日2020-08-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Domain architecture divergence leads to functional divergence in binding and catalytic domains of bacterial and fungal cellobiohydrolases.
J.Biol.Chem., 295, 2020
2YSK
DownloadVisualize
BU of 2ysk by Molmil
Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus
分子名称: Hypothetical protein TTHA1432, SULFATE ION
著者Okamoto, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2008-04-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus
To be Published
8GCL
DownloadVisualize
BU of 8gcl by Molmil
Cryo-EM structure of hAQP2 in DDM
分子名称: Aquaporin-2
著者Kamegawa, A, Suzuki, S, Nishikawa, K, Numoto, N, Suzuki, H, Fujiyoshi, Y.
登録日2023-03-02
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structural analysis of the water channel AQP2 by single-particle cryo-EM.
J.Struct.Biol., 215, 2023
3IP4
DownloadVisualize
BU of 3ip4 by Molmil
The high resolution structure of GatCAB
分子名称: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2009-08-17
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Two distinct regions in Staphylococcus aureus GatCAB guarantee accurate tRNA recognition
Nucleic Acids Res., 38, 2010
4PKE
DownloadVisualize
BU of 4pke by Molmil
The structure of a conserved Piezo channel domain reveals a novel beta sandwich fold
分子名称: PLATINUM (II) ION, Protein C10C5.1, isoform i
著者Kamajaya, A, Kaiser, J, Lee, J, Reid, M, Rees, D.C.
登録日2014-05-14
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Structure of a Conserved Piezo Channel Domain Reveals a Topologically Distinct beta Sandwich Fold.
Structure, 22, 2014
2DT5
DownloadVisualize
BU of 2dt5 by Molmil
Crystal Structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8
分子名称: AT-rich DNA-binding protein, CHLORIDE ION, GLYCEROL, ...
著者Nakamura, A, Sosa, A, Komori, H, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-11
公開日2007-01-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25) from Thermus thermophilus HB8 at 2.16 A resolution
Proteins, 66, 2007
5Z7M
DownloadVisualize
BU of 5z7m by Molmil
SmChiA sliding-intermediate with chitohexaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase A, ...
著者Nakamura, A, Iino, R.
登録日2018-01-30
公開日2018-09-26
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin.
Nat Commun, 9, 2018
4PKX
DownloadVisualize
BU of 4pkx by Molmil
The structure of a conserved Piezo channel domain reveals a novel beta sandwich fold
分子名称: Protein C10C5.1, isoform i
著者Kamajaya, A, Kaiser, J, Lee, J, Reid, M, Rees, D.C.
登録日2014-05-15
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The Structure of a Conserved Piezo Channel Domain Reveals a Topologically Distinct beta Sandwich Fold.
Structure, 22, 2014

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon