Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1Q1P
DownloadVisualize
BU of 1q1p by Molmil
E-Cadherin activation
分子名称: CALCIUM ION, Epithelial-cadherin
著者Haussinger, D, Stetefeld, J.
登録日2003-07-22
公開日2004-04-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Proteolytic E-cadherin activation followed by solution NMR and X-ray crystallography.
Embo J., 23, 2004
2N1T
DownloadVisualize
BU of 2n1t by Molmil
Dynamic binding mode of a synaptotagmin-1-SNARE complex in solution
分子名称: Synaptosomal-associated protein 25, Synaptotagmin-1, Syntaxin-1A, ...
著者Brewer, K, Bacaj, T, Cavalli, A, Camilloni, C, Swarbrick, J, Liu, J, Zhou, A, Zhou, P, Barlow, N, Xu, J, Seven, A, Prinslow, E, Voleti, R, Haussinger, D, Bonvin, A, Tomchick, D, Vendruscolo, M, Graham, B, Sudhof, T, Rizo, J.
登録日2015-04-21
公開日2015-06-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dynamic binding mode of a Synaptotagmin-1-SNARE complex in solution.
Nat.Struct.Mol.Biol., 22, 2015
1SP7
DownloadVisualize
BU of 1sp7 by Molmil
Structure of the Cys-rich C-terminal domain of Hydra minicollagen
分子名称: mini-collagen
著者Meier, S, Haussinger, D, Pokidysheva, E, Bachinger, H.P, Grzesiek, S.
登録日2004-03-16
公開日2004-05-18
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Determination of a high-precision NMR structure of the minicollagen cysteine rich domain from Hydra and characterization of its disulfide bond formation.
Febs Lett., 569, 2004
2V37
DownloadVisualize
BU of 2v37 by Molmil
Solution structure of the N-terminal extracellular domain of human T- cadherin
分子名称: CADHERIN-13
著者Dames, S.A, Bang, E.J, Ahrens, T, Haeussinger, D, Grzesiek, S.
登録日2007-06-13
公開日2008-06-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into the low adhesive capacity of human T-cadherin from the NMR structure of Its N-terminal extracellular domain.
J. Biol. Chem., 283, 2008
6J6Y
DownloadVisualize
BU of 6j6y by Molmil
FGFR4 D2 - Fab complex
分子名称: Fab Heavy chain, Fab light chain, Fibroblast growth factor receptor 4
著者Takahashi, M, Hanzawa, H.
登録日2019-01-16
公開日2019-08-07
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Preclinical Development of U3-1784, a Novel FGFR4 Antibody Against Cancer, and Avoidance of Its On-target Toxicity.
Mol.Cancer Ther., 18, 2019
6S07
DownloadVisualize
BU of 6s07 by Molmil
Structure of formylglycine-generating enzyme at 1.04 A in complex with copper and substrate reveals an acidic pocket for binding and acti-vation of molecular oxygen.
分子名称: Abz-ALA-THR-THR-PRO-LEU-CYS-GLY-PRO-SER-ARG-ALA-SER-ILE-LEU-SER-GLY-ARG, CALCIUM ION, CHLORIDE ION, ...
著者Leisinger, F, Miarzlou, D.A, Seebeck, F.P.
登録日2019-06-14
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Structure of formylglycine-generating enzyme in complex with copper and a substrate reveals an acidic pocket for binding and activation of molecular oxygen.
Chem Sci, 10, 2019
8OH7
DownloadVisualize
BU of 8oh7 by Molmil
Structure of A4M4C bound to (KR)4 Solution backbone structure refined by PCS
分子名称: Designed Armadillo repeat protein with four internal modules
著者Cucuzza, S, Zerbe, O.
登録日2023-03-20
公開日2023-12-13
実験手法SOLUTION NMR
主引用文献Unexpected dynamics in femtomolar complexes of binding proteins with peptides.
Nat Commun, 14, 2023
5BRU
DownloadVisualize
BU of 5bru by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: Carbonic anhydrase 2, SULFATE ION, ZINC ION, ...
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BRW
DownloadVisualize
BU of 5brw by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: ACETATE ION, Carbonic anhydrase 2, SULFATE ION, ...
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BRV
DownloadVisualize
BU of 5brv by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: Carbonic anhydrase 2, ZINC ION, pentamethylcyclopentadienyl iridium [N-benzensulfonamide-(2-pyridylmethyl-4-benzensulfonamide)amin] chloride
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
1SOP
DownloadVisualize
BU of 1sop by Molmil
C-terminal cystine-rich domain of Minicollagen-I from Hydra
分子名称: mini-collagen
著者Milbradt, A.G, Moroder, L, Renner, C.
登録日2004-03-15
公開日2004-04-27
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献The structure of the Cys-rich terminal domain of Hydra minicollagen, which is involved in disulfide networks of the nematocyst wall.
J.Biol.Chem., 279, 2004
1ZPX
DownloadVisualize
BU of 1zpx by Molmil
NMR Structure of Mcol1-[13-33] from Hydra
分子名称: mini-collagen
著者Milbradt, A.G, Boulegue, C, Moroder, L, Renner, C.
登録日2005-05-18
公開日2005-11-15
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献The Two Cysteine-rich Head Domains of Minicollagen from Hydra Nematocysts Differ in their Cystine Framework and Overall Fold Despite an Identical Cysteine Sequence Pattern.
J.Mol.Biol., 354, 2005
8BU4
DownloadVisualize
BU of 8bu4 by Molmil
Structure of DDB1 bound to DS22-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-[[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]methylamino]-9-(1-methylpyrazol-4-yl)purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUF
DownloadVisualize
BU of 8buf by Molmil
Structure of DDB1 bound to Z12-engaged CDK12-cyclin K
分子名称: 2-(6,7-dihydro-4~{H}-thieno[3,2-c]pyridin-5-ylmethyl)-6,7-dimethoxy-3~{H}-quinazolin-4-one, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUJ
DownloadVisualize
BU of 8buj by Molmil
Structure of DDB1 bound to DS06-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-(octylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.62 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BU1
DownloadVisualize
BU of 8bu1 by Molmil
Structure of DDB1 bound to DS17-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-[[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]methylamino]-9-(1-methylpyrazol-4-yl)purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BU9
DownloadVisualize
BU of 8bu9 by Molmil
Structure of DDB1 bound to roscovitine-engaged CDK12-cyclin K
分子名称: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ...
著者Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUO
DownloadVisualize
BU of 8buo by Molmil
Structure of DDB1 bound to DS24-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.58 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUP
DownloadVisualize
BU of 8bup by Molmil
Structure of DDB1 bound to DS30-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-[3-(3-methylphenyl)propylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BU6
DownloadVisualize
BU of 8bu6 by Molmil
Structure of DDB1 bound to DS55-engaged CDK12-cyclin K
分子名称: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ...
著者Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUK
DownloadVisualize
BU of 8buk by Molmil
Structure of DDB1 bound to DS08-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-(naphthalen-2-ylmethylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, CITRIC ACID, Cyclin-K, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BU3
DownloadVisualize
BU of 8bu3 by Molmil
Structure of DDB1 bound to DS19-engaged CDK12-cyclin K
分子名称: 1,2-ETHANEDIOL, 2-morpholin-4-yl-9-propan-2-yl-~{N}-[(4-pyridin-2-ylphenyl)methyl]purin-6-amine, Cyclin-K, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUB
DownloadVisualize
BU of 8bub by Molmil
Structure of DDB1 bound to dCeMM4-engaged CDK12-cyclin K
分子名称: CITRIC ACID, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUQ
DownloadVisualize
BU of 8buq by Molmil
Structure of DDB1 bound to DS43-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-[[1-(3-chlorophenyl)pyrazol-3-yl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, CITRIC ACID, Cyclin-K, ...
著者Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUL
DownloadVisualize
BU of 8bul by Molmil
Structure of DDB1 bound to DS11-engaged CDK12-cyclin K
分子名称: (2~{R})-2-[[6-(3-phenylpropylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, 1,2-ETHANEDIOL, Cyclin-K, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024

 

12>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon