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3WOA
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BU of 3woa by Molmil
Crystal structure of lambda repressor (1-45) fused with maltose-binding protein
分子名称: Repressor protein CI, Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2013-12-25
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor.
FEBS Open Bio, 8, 2018
7VOS
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BU of 7vos by Molmil
High-resolution neutron and X-ray joint refined structure of high-potential iron-sulfur protein in the oxidized state
分子名称: AMMONIUM ION, GLYCEROL, High-potential iron-sulfur protein, ...
著者Hanazono, Y, Hirano, Y, Takeda, K, Kusaka, K, Tamada, T, Miki, K.
登録日2021-10-14
公開日2022-06-01
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (0.66 Å), X-RAY DIFFRACTION
主引用文献Revisiting the concept of peptide bond planarity in an iron-sulfur protein by neutron structure analysis.
Sci Adv, 8, 2022
3W1Z
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BU of 3w1z by Molmil
Heat shock protein 16.0 from Schizosaccharomyces pombe
分子名称: Heat shock protein 16
著者Hanazono, Y, Takeda, K, Akiyama, N, Aikawa, Y, Miki, K.
登録日2012-11-26
公開日2013-03-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Nonequivalence Observed for the 16-Meric Structure of a Small Heat Shock Protein, SpHsp16.0, from Schizosaccharomyces pombe
Structure, 21, 2013
6AIR
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BU of 6air by Molmil
High resolution structure of perdeuterated high-potential iron-sulfur protein
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-08-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
6AIQ
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BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-08-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
5ZCA
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BU of 5zca by Molmil
Crystal structure of lambda repressor (1-20) fused with maltose-binding protein
分子名称: CITRIC ACID, Repressor protein cI,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-02-16
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor
Febs Open Bio, 8, 2018
3VQL
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BU of 3vql by Molmil
Small heat shock protein hsp14.0 of C-terminal deletion variant
分子名称: Small heat shock protein StHsp14.0
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2012-03-26
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
3VQK
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BU of 3vqk by Molmil
Small heat shock protein hsp14.0 of wild type
分子名称: Small heat shock protein StHsp14.0
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2012-03-26
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
3VQM
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BU of 3vqm by Molmil
Small heat shock protein hsp14.0 of C-terminal deletion variant with C-terminal peptide
分子名称: C-terminal peptide from Small heat shock protein StHsp14.0, Small heat shock protein StHsp14.0
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2012-03-26
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
5B3P
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BU of 5b3p by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P212121 form
分子名称: CALCIUM ION, NADH-quinone oxidoreductase subunit 5
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-09
公開日2016-07-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5B3Q
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BU of 5b3q by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P63 form
分子名称: NADH-quinone oxidoreductase subunit 5
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-09
公開日2016-07-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5B3Y
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BU of 5b3y by Molmil
Crystal structure of hPin1 WW domain (5-23) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3W
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BU of 5b3w by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in C2221 form
分子名称: CITRIC ACID, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3X
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BU of 5b3x by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in P41212 form
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5BMY
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BU of 5bmy by Molmil
Crystal structure of hPin1 WW domain (5-21) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2015-05-25
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3Z
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BU of 5b3z by Molmil
Crystal structure of hPin1 WW domain (5-39) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5ZUI
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BU of 5zui by Molmil
Crystal Structure of HSP104 from Chaetomium thermophilum
分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat Shock Protein 104, SULFATE ION
著者Hanazono, Y, Inoue, Y, Noguchi, K, Yohda, M, Shinohara, K, Takeda, K, Miki, K.
登録日2018-05-07
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 2021
6JGJ
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BU of 6jgj by Molmil
Crystal structure of the F99S/M153T/V163A/E222Q variant of GFP at 0.78 A
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Takaba, K, Tai, Y, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
7CG3
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BU of 7cg3 by Molmil
Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
分子名称: Heat shock protein 104
著者Inoue, Y, Hanazono, Y, Noi, K, Kawamoto, A, Kimatsuka, M, Harada, R, Takeda, K, Iwamasa, N, Shibata, K, Noguchi, K, Shigeta, Y, Namba, K, Ogura, T, Miki, K, Shinohara, K, Yohda, M.
登録日2020-06-30
公開日2021-04-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 29, 2021
8YTN
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BU of 8ytn by Molmil
Single-chain Fv antibody of E11
分子名称: GLYCEROL, Single-chain Fv antibody of E11
著者Yoshida, M, Hanazono, Y, Numoto, N, Ito, N, Oda, M.
登録日2024-03-26
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Affinity-matured antibody with a disulfide bond in H-CDR3 loop.
Arch.Biochem.Biophys., 758, 2024
8YTO
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BU of 8yto by Molmil
Single-chain Fv antibody of E11 complex with NP-glycine
分子名称: 2-[2-(3-nitro-4-oxidanyl-phenyl)ethanoylamino]ethanoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Yoshida, M, Hanazono, Y, Numoto, N, Ito, N, Oda, M.
登録日2024-03-26
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Affinity-matured antibody with a disulfide bond in H-CDR3 loop.
Arch.Biochem.Biophys., 758, 2024
8YTP
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BU of 8ytp by Molmil
Single-chain Fv antibody of E11 complex with NP-glycine under reducing conditions
分子名称: 2-[2-(3-nitro-4-oxidanyl-phenyl)ethanoylamino]ethanoic acid, Single-chain Fv antibody of E11
著者Yoshida, M, Hanazono, Y, Numoto, N, Ito, N, Oda, M.
登録日2024-03-26
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Affinity-matured antibody with a disulfide bond in H-CDR3 loop.
Arch.Biochem.Biophys., 758, 2024
3AAC
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BU of 3aac by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form II crystal
分子名称: Putative uncharacterized protein ST1653
著者Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
登録日2009-11-13
公開日2010-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
3AAB
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BU of 3aab by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form I crystal
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Putative uncharacterized protein ST1653
著者Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
登録日2009-11-13
公開日2010-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
5WQR
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BU of 5wqr by Molmil
High resolution structure of high-potential iron-sulfur protein in the reduced state
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
登録日2016-11-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017

 

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