Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5NVA
DownloadVisualize
BU of 5nva by Molmil
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
分子名称: N-acetyl-beta-neuraminic acid, Putative sodium:solute symporter, SODIUM ION
著者Wahlgren, W.Y, North, R.A, Dunevall, E, Goyal, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
登録日2017-05-03
公開日2018-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
5NV9
DownloadVisualize
BU of 5nv9 by Molmil
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
分子名称: DODECYL-BETA-D-MALTOSIDE, N-acetyl-beta-neuraminic acid, PHOSPHATE ION, ...
著者Wahlgren, W.Y, North, R.A, Dunevall, E, Paz, A, Goyal, P, Bisignano, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
登録日2017-05-03
公開日2018-04-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
2XQ2
DownloadVisualize
BU of 2xq2 by Molmil
Structure of the K294A mutant of vSGLT
分子名称: DI(HYDROXYETHYL)ETHER, SODIUM/GLUCOSE COTRANSPORTER
著者Watanabe, A, Choe, S, Chaptal, V, Rosenberg, J.M, Wright, E.M, Grabe, M, Abramson, J.
登録日2010-09-01
公開日2010-12-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献The Mechanism of Sodium and Substrate Release from the Binding Pocket of Vsglt
Nature, 468, 2010
3RQ7
DownloadVisualize
BU of 3rq7 by Molmil
Polo-like kinase 1 Polo box domain in complex with a C6H5(CH2)8-derivatized peptide inhibitor
分子名称: C6H5(CH2)8-derivatized peptide inhibitor, Serine/threonine-protein kinase PLK1
著者Liu, F, Park, J.-E, Qian, W.-J, Lim, D.C, Graber, M, Berg, T, Yaffe, M.B, Lee, K.S, Burke Jr, T.R.
登録日2011-04-27
公開日2011-07-20
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Serendipitous alkylation of a Plk1 ligand uncovers a new binding channel.
Nat.Chem.Biol., 7, 2011
3TC5
DownloadVisualize
BU of 3tc5 by Molmil
Selective targeting of disease-relevant protein binding domains by O-phosphorylated natural product derivatives
分子名称: (11alpha,16alpha)-9-fluoro-11,17-dihydroxy-16-methyl-3,20-dioxopregna-1,4-dien-21-yl dihydrogen phosphate, HEXAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Graeber, M, Janczyk, W, Sperl, B, Elumalai, N, Kozany, C, Hausch, F, Holak, T.A, Berg, T.
登録日2011-08-08
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Selective targeting of disease-relevant protein binding domains by o-phosphorylated natural product derivatives.
Acs Chem.Biol., 6, 2011
7JH6
DownloadVisualize
BU of 7jh6 by Molmil
De novo designed two-domain di-Zn(II) and porphyrin-binding protein
分子名称: NONAETHYLENE GLYCOL, Two-domain di-Zn(II) and porphyrin-binding protein, ZINC ION, ...
著者Schmidt, N, Liu, L, DeGrado, W.F.
登録日2020-07-20
公開日2020-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Allosteric cooperation in a de novo-designed two-domain protein.
Proc.Natl.Acad.Sci.USA, 117, 2020
2MUZ
DownloadVisualize
BU of 2muz by Molmil
ssNMR structure of a designed rocker protein
分子名称: designed rocker protein
著者Wang, T, Joh, N, Wu, Y, DeGrado, W.F, Hong, M.
登録日2014-09-18
公開日2014-12-24
最終更新日2015-01-14
実験手法SOLUTION NMR
主引用文献De novo design of a transmembrane Zn2+-transporting four-helix bundle.
Science, 346, 2014
6W85
DownloadVisualize
BU of 6w85 by Molmil
K2P2.1 (TREK-1):ML335 complex, 200 mM K+
分子名称: CADMIUM ION, DECANE, HEXADECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-20
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W8C
DownloadVisualize
BU of 6w8c by Molmil
K2P2.1 (TREK-1):ML335 complex, 1 mM K+
分子名称: CADMIUM ION, DODECANE, HEXADECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-20
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W88
DownloadVisualize
BU of 6w88 by Molmil
K2P2.1 (TREK-1):ML335 complex, 30 mM K+
分子名称: CADMIUM ION, DECANE, DODECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-20
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W7C
DownloadVisualize
BU of 6w7c by Molmil
K2P2.1 (TREK-1), 1 mM K+
分子名称: CADMIUM ION, DECANE, DODECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-19
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
4C69
DownloadVisualize
BU of 4c69 by Molmil
ATP binding to murine voltage-dependent anion channel 1 (mVDAC1).
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Paz, A, Colletier, J.P, Abramson, J.
登録日2013-09-17
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.277 Å)
主引用文献Structure-Guided Simulations Illuminate the Mechanism of ATP Transport Through Vdac1.
Nat.Struct.Mol.Biol., 21, 2014
4P6J
DownloadVisualize
BU of 4p6j by Molmil
Crystal Structure of the Computationally Designed Transmembrane Metallotransporter with 4-bromophenylalanine in Octyl Glucoside
分子名称: Computationally Designed Transporter of Zn(II) and Proton, SULFATE ION
著者Joh, N.H, Acharya, R, DeGrado, W.F.
登録日2014-03-25
公開日2014-12-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献De novo design of a transmembrane Zn2+-transporting four-helix bundle.
Science, 346, 2014
4P6L
DownloadVisualize
BU of 4p6l by Molmil
Crystal Structure of the Computationally Designed Transmembrane Metallotransporter in Octyl Glucoside
分子名称: Computationally Designed Transporter of Zn(II) and proton
著者Joh, N.H, Acharya, R, DeGrado, W.F.
登録日2014-03-25
公開日2014-12-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献De novo design of a transmembrane Zn2+-transporting four-helix bundle.
Science, 346, 2014
4P6K
DownloadVisualize
BU of 4p6k by Molmil
Crystal Structure of the Computationally Designed Transmembrane Metallotransporter with 4-bromophenylalanine in Lipidic Cubic Phase
分子名称: Computationally Designed Transporter of Zn(II) and Proton
著者Joh, N.H, Acharya, R, DeGrado, W.F.
登録日2014-03-25
公開日2014-12-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献De novo design of a transmembrane Zn2+-transporting four-helix bundle.
Science, 346, 2014
7PGB
DownloadVisualize
BU of 7pgb by Molmil
NaV_Ae1/Sp1CTD_pore-SAT09 complex
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4-NITROBENZOIC ACID, ...
著者Lolicato, M, Arrigoni, C.
登録日2021-08-13
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PG8
DownloadVisualize
BU of 7pg8 by Molmil
NaV_Ae1/Sp1CTD_pore-ANT05 complex
分子名称: ANT05 H12 fab fragment, heavy chain, light chain, ...
著者Lolicato, M, Arrigoni, C.
登録日2021-08-13
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PGF
DownloadVisualize
BU of 7pgf by Molmil
Calcium-selective Sp1 channel pore domain only
分子名称: Ion transporter
著者Lolicato, M, Arrigoni, C.
登録日2021-08-13
公開日2022-06-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PGI
DownloadVisualize
BU of 7pgi by Molmil
NaVAb1p (bicelles)
分子名称: ACETATE ION, Ion transport protein, MAGNESIUM ION, ...
著者Lolicato, M, Arrigoni, C.
登録日2021-08-14
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.638 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PGH
DownloadVisualize
BU of 7pgh by Molmil
NaVAe1/Sp1CTDp (DDM)
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DODECAETHYLENE GLYCOL, DODECANE, ...
著者Lolicato, M, Arrigoni, C.
登録日2021-08-14
公開日2022-06-15
最終更新日2022-06-29
実験手法X-RAY DIFFRACTION (4.194 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PGG
DownloadVisualize
BU of 7pgg by Molmil
NaVAb1p detergent (DM)
分子名称: 2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}ethyl heptadecanoate, Ion transport protein
著者Lolicato, M, Arrigoni, C.
登録日2021-08-13
公開日2022-06-15
最終更新日2022-06-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
4MTH
DownloadVisualize
BU of 4mth by Molmil
Crystal structure of mature human RegIIIalpha
分子名称: Regenerating islet-derived protein 3-alpha 15 kDa form, ZINC ION
著者Derebe, M.G.
登録日2013-09-19
公開日2013-11-27
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Antibacterial membrane attack by a pore-forming intestinal C-type lectin.
Nature, 505, 2013
6W7B
DownloadVisualize
BU of 6w7b by Molmil
K2P2.1 (TREK-1), 0 mM K+
分子名称: CADMIUM ION, DECANE, DODECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-19
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.88 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W84
DownloadVisualize
BU of 6w84 by Molmil
K2P2.1 (TREK-1), 200 mM K+
分子名称: CADMIUM ION, DODECANE, N-OCTANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-20
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W8A
DownloadVisualize
BU of 6w8a by Molmil
K2P2.1 (TREK-1):ML335 complex, 10 mM K+
分子名称: CADMIUM ION, DODECANE, HEXADECANE, ...
著者Lolicato, M, Minor, D.L.
登録日2020-03-20
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020

 

12>

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon