Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2RRE
DownloadVisualize
BU of 2rre by Molmil
Structure and function of the N-terminal nucleolin binding domain of nuclear valocine containing protein like 2 (NVL2) harboring a nucleolar localization signal
分子名称: Putative uncharacterized protein
著者Fujiwara, Y, Fujiwara, K, Goda, N, Iwaya, N, Tenno, T, Shirakawa, M, Hiroaki, H.
登録日2010-08-03
公開日2011-04-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of the N-terminal nucleolin binding domain of nuclear valosin-containing protein-like 2 (NVL2) harboring a nucleolar localization signal
J.Biol.Chem., 286, 2011
3E7K
DownloadVisualize
BU of 3e7k by Molmil
Crystal Structure of an antiparallel coiled-coil tetramerization domain from TRPM7 channels
分子名称: TRPM7 channel
著者Fujiwara, Y, Minor, D.L.
登録日2008-08-18
公開日2008-09-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献X-ray crystal structure of a TRPM assembly domain reveals an antiparallel four-stranded coiled-coil.
J.Mol.Biol., 383, 2008
3VMX
DownloadVisualize
BU of 3vmx by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2012-05-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
3AXA
DownloadVisualize
BU of 3axa by Molmil
Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3
分子名称: Afadin, Nectin-3
著者Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H.
登録日2011-03-31
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
3VMZ
DownloadVisualize
BU of 3vmz by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (oxidation/H2O2)
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2013-01-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Oxidation/H2O2)
To be Published
3VMY
DownloadVisualize
BU of 3vmy by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (REDUCTION/DTT)
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Reduction/Dtt)
To be Published
3VN0
DownloadVisualize
BU of 3vn0 by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (mutation/C245S)
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Mutation/C245S)
To be Published
3VYI
DownloadVisualize
BU of 3vyi by Molmil
Crystal Structure of a trimeric coiled-coil (I/I-type) assembly domain from the voltage-gated proton channel mutant
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Nakagawa, A.
登録日2012-09-25
公開日2013-02-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献Gating of the designed trimeric/tetrameric voltage-gated H+ channel.
J.Physiol.(Paris), 591, 2013
4Z2M
DownloadVisualize
BU of 4z2m by Molmil
Crystal structure of human SPT16 Mid-AID/H3-H4 tetramer FACT Histone complex
分子名称: FACT complex subunit SPT16, Histone H3.1, Histone H4
著者Tsunaka, Y, Fujiwara, Y, Oyama, T, Hirose, S, Morikawa, K.
登録日2015-03-30
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.981 Å)
主引用文献Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
3DVJ
DownloadVisualize
BU of 3dvj by Molmil
Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain (without cloning artifact, HM to TV) complex
分子名称: CALCIUM ION, Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B
著者Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
登録日2008-07-18
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVE
DownloadVisualize
BU of 3dve by Molmil
Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain complex
分子名称: CALCIUM ION, Calmodulin, NICKEL (II) ION, ...
著者Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
登録日2008-07-18
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVM
DownloadVisualize
BU of 3dvm by Molmil
Crystal Structure of Ca2+/CaM-CaV2.1 IQ domain complex
分子名称: CALCIUM ION, Calmodulin, Voltage-dependent P/Q-type calcium channel subunit alpha-1A
著者Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
登録日2008-07-18
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVK
DownloadVisualize
BU of 3dvk by Molmil
Crystal Structure of Ca2+/CaM-CaV2.3 IQ domain complex
分子名称: CALCIUM ION, Calmodulin, Voltage-dependent R-type calcium channel subunit alpha-1E
著者Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
登録日2008-07-18
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
4Z2N
DownloadVisualize
BU of 4z2n by Molmil
Crystal structure of human FACT SPT16 middle domain
分子名称: FACT complex subunit SPT16
著者Tsunaka, Y, Fujiwara, Y, Oyama, T, Hirose, S, Morikawa, K.
登録日2015-03-30
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.923 Å)
主引用文献Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
1IXS
DownloadVisualize
BU of 1ixs by Molmil
Structure of RuvB complexed with RuvA domain III
分子名称: Holliday junction DNA helicase ruvA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RuvB
著者Yamada, K, Miyata, T, Tsuchiya, D, Oyama, T, Fujiwara, Y, Ohnishi, T, Iwasaki, H, Shinagawa, H, Ariyoshi, M, Mayanagi, K, Morikawa, K.
登録日2002-07-04
公開日2002-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
1IXR
DownloadVisualize
BU of 1ixr by Molmil
RuvA-RuvB complex
分子名称: Holliday junction DNA helicase ruvA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RuvB
著者Yamada, K, Miyata, T, Tsuchiya, D, Oyama, T, Fujiwara, Y, Ohnishi, T, Iwasaki, H, Shinagawa, H, Ariyoshi, M, Mayanagi, K, Morikawa, K.
登録日2002-07-04
公開日2002-11-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
3WKV
DownloadVisualize
BU of 3wkv by Molmil
Voltage-gated proton channel: VSOP/Hv1 chimeric channel
分子名称: Ion channel
著者Takeshita, K, Sakata, S, Yamashita, E, Fujiwara, Y, Kawanabe, A, Kurokawa, T, Okochi, Y, Matsuda, M, Narita, H, Okamura, Y, Nakagawa, A.
登録日2013-10-31
公開日2014-03-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.453 Å)
主引用文献X-ray crystal structure of voltage-gated proton channel.
Nat.Struct.Mol.Biol., 21, 2014
8YK6
DownloadVisualize
BU of 8yk6 by Molmil
Magnetic effects of thaumatin crystals; observation of the crystal growth of magneto-Archimedes levitation and magnetic orientation
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Nakabayashi, M, Inaka, K, Fujiwara, M, Hagiwara, M, Maki, S.
登録日2024-03-04
公開日2025-02-26
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Magnetic effects of thaumatin crystals; observation of crystal growth by magneto-Archimedes levitation and magnetic orientation.
Plos One, 20, 2025
7PL9
DownloadVisualize
BU of 7pl9 by Molmil
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
分子名称: RETINAL, Rhodopsin
著者Matzov, D, Kaczmarczyk, I, Shalev-Benami, M.
登録日2021-08-29
公開日2022-07-06
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Rhodopsin-bestrophin fusion proteins from unicellular algae form gigantic pentameric ion channels.
Nat.Struct.Mol.Biol., 29, 2022
6U9Q
DownloadVisualize
BU of 6u9q by Molmil
Crystal Structure Analysis of DNA-BCL11A Znf domain complex
分子名称: B-cell lymphoma/leukemia 11A, DNA3, DNA5, ...
著者Seo, H.-S, Dhe-Paganon, S.
登録日2019-09-09
公開日2020-09-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6
Structure, 2024
8THO
DownloadVisualize
BU of 8tho by Molmil
Solution structure of the zinc finger repeat domain of BCL11A (ZnF456)
分子名称: B-cell lymphoma/leukemia 11A, ZINC ION
著者Viennet, T, Yin, M, Orkin, S.H, Arthanari, H.
登録日2023-07-17
公開日2024-07-24
最終更新日2025-02-05
実験手法SOLUTION NMR
主引用文献Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6.
Structure, 32, 2024
8TLO
DownloadVisualize
BU of 8tlo by Molmil
Crystal Structure Analysis of BCL11A in complex with DNA
分子名称: B-cell lymphoma/leukemia 11A, DNA (5'-D(P*CP*GP*AP*CP*CP*GP*CP*AP*TP*TP*GP*GP*TP*CP*AP*AP*GP*CP*G)-3'), DNA (5'-D(P*GP*CP*TP*TP*GP*AP*CP*CP*AP*AP*TP*GP*CP*GP*GP*TP*CP*GP*C)-3'), ...
著者Seo, H.-S, Dhe-Paganon, S.
登録日2023-07-27
公開日2024-08-14
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6.
Structure, 32, 2024
5H36
DownloadVisualize
BU of 5h36 by Molmil
Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Rhodobacter sphaeroides
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Uncharacterized protein TRIC
著者Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O.
登録日2016-10-20
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.409 Å)
主引用文献Crystal structures of the TRIC trimeric intracellular cation channel orthologues
Cell Res., 26, 2016
5F1C
DownloadVisualize
BU of 5f1c by Molmil
Crystal structure of an invertebrate P2X receptor from the Gulf Coast tick in the presence of ATP and Zn2+ ion at 2.9 Angstroms
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, ...
著者Kasuya, G, Hattori, M, Ishitani, R, Nureki, O.
登録日2015-11-30
公開日2016-03-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels
Cell Rep, 14, 2016
5WIR
DownloadVisualize
BU of 5wir by Molmil
Structure of the TRF1-TERB1 interface
分子名称: TERB1-TBM, Telomeric repeat-binding factor 1
著者Nandakumar, J, Pendlebury, D.F, Smith, E.M, Tesmer, V.M.
登録日2017-07-20
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017

 

12>

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon