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8RF9
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CgsiGP1 sample in nanodisc
分子名称: Cyclic beta 1-2 glucan synthetase
著者Sedzicki, J, Ni, D, Lehmann, F, Stahlberg, H, Dehio, C.
登録日2023-12-12
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.
Nat Commun, 15, 2024
8RF0
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WT-CGS sample in nanodisc
分子名称: Cyclic beta-(1,2)-glucan synthase NdvB, URIDINE-5'-DIPHOSPHATE-GLUCOSE, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose, ...
著者Sedzicki, J, Ni, D, Lehmann, F, Stahlberg, H, Dehio, C.
登録日2023-12-12
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.
Nat Commun, 15, 2024
8RFG
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CgsiGP3 sample in nanodisc
分子名称: Cyclic beta 1-2 glucan synthetase, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose, ...
著者Sedzicki, J, Ni, D, Lehmann, F, Stahlberg, H, Dehio, C.
登録日2023-12-12
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.
Nat Commun, 15, 2024
8RFE
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CgsiGP2 sample in nanodisc
分子名称: Cyclic beta 1-2 glucan synthetase, URIDINE-5'-DIPHOSPHATE-GLUCOSE, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose
著者Sedzicki, J, Ni, D, Lehmann, F, Stahlberg, H, Dehio, C.
登録日2023-12-12
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure-function analysis of the cyclic beta-1,2-glucan synthase from Agrobacterium tumefaciens.
Nat Commun, 15, 2024
7ZBR
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BU of 7zbr by Molmil
Crystal Structure of full-length Bartonella Effector protein 1
分子名称: Bartonella effector protein (Bep) substrate of VirB T4SS
著者Huber, M.
登録日2022-03-24
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Full-length structure of a FIC effector protein from Bartonella reveals a novel structural domain
To be published
4PRX
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BU of 4prx by Molmil
E. coli GyrB 43-kDa N-terminal fragment in complex with ADP+Pi
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, GyrB, ...
著者Stanger, F.V, Schirmer, T.
登録日2014-03-06
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
4PU9
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E. coli GyrB 43-kDa N-terminal fragment in complex with ADP-BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, GyrB, ...
著者Stanger, F.V, Schirmer, T.
登録日2014-03-12
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
4PRV
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E. coli GyrB 43-kDa N-terminal fragment in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, GyrB, MAGNESIUM ION
著者Stanger, F.V, Schirmer, T.
登録日2014-03-06
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
5EU0
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FIC domain of Bep1 from Bartonella rochalimae in complex with BiaA
分子名称: Bartonella effector protein (Bep) substrate of VirB T4SS, SULFATE ION, antitoxin 1
著者Goepfert, A.
登録日2015-11-18
公開日2017-03-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis for Rho-family GTPase discrimination by a bacterial virulence factor
to be published
2JK8
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Type IV secretion system effector protein BepA complexed with a pyrophosphate moiety
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Palanivelu, D.V, Schirmer, T.
登録日2008-08-22
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Fic Domain Catalyzed Adenylylation: Insight Provided by the Structural Analysis of the Type Iv Secretion System Effector Bepa.
Protein Sci., 20, 2011
7ZOA
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BU of 7zoa by Molmil
cryo-EM structure of CGT ABC transporter in presence of CBG substrate
分子名称: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, Cyclooctadecakis-(1-2)-(beta-D-glucopyranose)
著者Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
登録日2022-04-24
公開日2022-12-07
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZO8
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cryo-EM structure of CGT ABC transporter in nanodisc apo state
分子名称: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, DIUNDECYL PHOSPHATIDYL CHOLINE
著者Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
登録日2022-04-24
公開日2022-12-07
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZO9
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BU of 7zo9 by Molmil
cryo-EM structure of CGT ABC transporter in vanadate trapped state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
著者Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
登録日2022-04-24
公開日2022-12-07
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZNU
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BU of 7znu by Molmil
cryo-EM structure of CGT ABC transporter in detergent micelle
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
著者Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
登録日2022-04-22
公開日2022-12-07
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
4PY3
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BU of 4py3 by Molmil
Crystal Structure of the N-terminal FIC domain of Bep8 protein (VirB-translocated Bartonella effector protein) from Bartonella sp. 1-1C
分子名称: 1,2-ETHANEDIOL, Bartonella effector protein (Bep) substrate of VirB T4SS
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-03-25
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.
Microorganisms, 9, 2021
4R1F
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BU of 4r1f by Molmil
Re-refined Human DNA topoisomerase IIa (ATPase and transducer domains) in complex with ADP and SO4
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2-alpha, GLYCEROL, ...
著者Stanger, F.V, Schirmer, T.
登録日2014-08-05
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
5JFF
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BU of 5jff by Molmil
E. coli EcFicT mutant G55R in complex with EcFicA
分子名称: CHLORIDE ION, Probable adenosine monophosphate-protein transferase fic, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM, ...
著者Stanger, F.V, Schirmer, T.
登録日2016-04-19
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin.
Plos One, 11, 2016
5JFZ
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BU of 5jfz by Molmil
E. coli EcFicT in complex with EcFicA mutant E28G
分子名称: Probable adenosine monophosphate-protein transferase fic, Uncharacterized protein YhfG
著者Stanger, F.V, Schirmer, T.
登録日2016-04-19
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin.
Plos One, 11, 2016
2VY3
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BU of 2vy3 by Molmil
Type IV secretion system effector protein BepA
分子名称: CELL FILAMENTATION PROTEIN, CHLORIDE ION, NICKEL (II) ION
著者Palanivelu, D.V, Schirmer, T.
登録日2008-07-17
公開日2009-11-17
最終更新日2011-11-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Fic Domain Catalyzed Adenylylation: Insight Provided by the Structural Analysis of the Type Iv Secretion System Effector Bepa.
Protein Sci., 20, 2011
2VZA
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Type IV secretion system effector protein BepA
分子名称: CELL FILAMENTATION PROTEIN, SULFATE ION
著者Meury, M, Schirmer, T.
登録日2008-07-31
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Fic Domain Catalyzed Adenylylation: Insight Provided by the Structural Analysis of the Type Iv Secretion System Effector Bepa.
Protein Sci., 20, 2011
5CMT
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BU of 5cmt by Molmil
Fic protein from Neisseria meningitidis (NmFic) mutant E156R Y183F in dimeric form
分子名称: Adenosine monophosphate-protein transferase NmFic, CHLORIDE ION, GLYCEROL
著者Stanger, F.V, Schirmer, T.
登録日2015-07-17
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Intrinsic regulation of FIC-domain AMP-transferases by oligomerization and automodification.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CGL
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BU of 5cgl by Molmil
Fic protein from Neisseria meningitidis (NmFic) mutant E102R in dimeric form
分子名称: Adenosine monophosphate-protein transferase NmFic, DI(HYDROXYETHYL)ETHER
著者Stanger, F.V, Schirmer, T.
登録日2015-07-09
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Intrinsic regulation of FIC-domain AMP-transferases by oligomerization and automodification.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CKL
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Fic protein from Neisseria meningitidis (NmFic) mutant E156R in dimeric form
分子名称: Adenosine monophosphate-protein transferase NmFic, CHLORIDE ION, GLYCEROL
著者Stanger, F.V, Schirmer, T.
登録日2015-07-15
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Intrinsic regulation of FIC-domain AMP-transferases by oligomerization and automodification.
Proc.Natl.Acad.Sci.USA, 113, 2016
4XI8
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BU of 4xi8 by Molmil
Crystal Structure of the FIC domain of Bep5 protein (VirB-translocated Bartonella effector protein) from Bartonella clarridgeiae
分子名称: 1,2-ETHANEDIOL, Bartonella effector protein (Bep) substrate of VirB T4SS
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-01-06
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.
Microorganisms, 9, 2021
4YK2
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Crystal Structure of the BID Domain of Bep9 from Bartonella clarridgeiae
分子名称: 1,2-ETHANEDIOL, Bartonella effector protein (Bep) substrate of VirB T4SS, SULFATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-03-03
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook.
Structure, 25, 2017

 

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