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2EZ6
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BU of 2ez6 by Molmil
Crystal structure of Aquifex aeolicus RNase III (D44N) complexed with product of double-stranded RNA processing
分子名称: 28-MER, MAGNESIUM ION, Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-11-10
公開日2006-02-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Insight into the Mechanism of Double-Stranded RNA Processing by Ribonuclease III.
Cell(Cambridge,Mass.), 124, 2006
1NPR
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BU of 1npr by Molmil
CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS NUSG IN C222(1)
分子名称: Transcription antitermination protein nusG
著者Knowlton, J.R, Bubunenko, M, Andrykovitch, M, Guo, W, Routzhan, K.M, Waugh, D.S, Court, D.L, Ji, X.
登録日2003-01-18
公開日2003-03-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献A Spring-Loaded State of NusG in Its Functional Cycle Is Suggested by X-ray Crystallography and Supported by Site-Directed Mutants
Biochemistry, 42, 2003
1NPP
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BU of 1npp by Molmil
CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS NUSG IN P2(1)
分子名称: ISOPROPYL ALCOHOL, Transcription antitermination protein nusG
著者Knowlton, J.R, Bubunenko, M, Andrykovitch, M, Guo, W, Routzahn, K.M, Waugh, D.S, Court, D.L, Ji, X.
登録日2003-01-18
公開日2003-03-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Spring-Loaded State of NusG in Its Functional Cycle Is Suggested by X-ray Crystallography and Supported by Site-Directed Mutants
Biochemistry, 42, 2003
2NUF
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BU of 2nuf by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 2.5-Angstrom Resolution
分子名称: 28-MER, MAGNESIUM ION, Ribonuclease III
著者Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
登録日2006-11-09
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
2NUG
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BU of 2nug by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 1.7-Angstrom Resolution
分子名称: 5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3', 5'-R(P*AP*GP*UP*GP*GP*CP*CP*UP*UP*GP*C)-3', MAGNESIUM ION, ...
著者Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
登録日2006-11-09
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
2NUE
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BU of 2nue by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 2.9-Angstrom Resolution
分子名称: 46-MER, Ribonuclease III
著者Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
登録日2006-11-09
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
1YYK
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BU of 1yyk by Molmil
Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YZ9
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BU of 1yz9 by Molmil
Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution
分子名称: 5'-R(*CP*GP*AP*AP*CP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III, SULFATE ION
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-28
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYO
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BU of 1yyo by Molmil
Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with double-stranded RNA at 2.9-Angstrom Resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYW
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BU of 1yyw by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with double stranded RNA at 2.8-Angstrom Resolution
分子名称: 5'-R(*AP*AP*AP*UP*AP*UP*AP*UP*AP*UP*UP*U)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
4M2Z
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BU of 4m2z by Molmil
Crystal structure of RNASE III complexed with double-stranded RNA and CMP (TYPE II CLEAVAGE)
分子名称: CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, RNA10, ...
著者Gan, J, Liang, Y.-H, Shaw, G.X, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2013-08-05
公開日2013-12-11
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献RNase III: Genetics and Function; Structure and Mechanism.
Annu. Rev. Genet., 47, 2013
4M30
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BU of 4m30 by Molmil
Crystal structure of RNASE III complexed with double-stranded RNA AND AMP (TYPE II CLEAVAGE)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
著者Gan, J, Liang, Y.-H, Shaw, G.X, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2013-08-05
公開日2013-12-11
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献RNase III: Genetics and Function; Structure and Mechanism.
Annu. Rev. Genet., 47, 2013
8TWQ
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BU of 8twq by Molmil
Structure of bacteriophage lambda RexA protein
分子名称: CADMIUM ION, Protein rexA, SULFATE ION
著者Adams, M.C, Chappie, J.S, Schiltz, C.J.
登録日2023-08-21
公開日2024-04-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of bacteriophage lambda RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins.
Nucleic Acids Res., 52, 2024
1RC7
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BU of 1rc7 by Molmil
Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3', Ribonuclease III
著者Blaszczyk, J, Gan, J, Ji, X.
登録日2003-11-03
公開日2004-03-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Noncatalytic Assembly of Ribonuclease III with Double-Stranded RNA.
Structure, 12, 2004
1RC5
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BU of 1rc5 by Molmil
CRYSTAL STRUCTURE OF MG(II)-COMPLEX OF RNASE III ENDONUCLEASE DOMAIN FROM AQUIFEX AEOLICUS AT 2.30 ANGSTROM RESOLUTION
分子名称: MAGNESIUM ION, Ribonuclease III
著者Blaszczyk, J, Gan, J, Ji, X.
登録日2003-11-03
公開日2004-03-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Noncatalytic Assembly of Ribonuclease III with Double-Stranded RNA.
Structure, 12, 2004
3R9X
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BU of 3r9x by Molmil
Crystal structure of Era in complex with MgGDPNP, nucleotides 1506-1542 of 16S ribosomal RNA, and KsgA
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, GTPase Era, ...
著者Tu, C, Ji, X.
登録日2011-03-26
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3' end of 16S rRNA.
Proc.Natl.Acad.Sci.USA, 108, 2011
3R9W
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BU of 3r9w by Molmil
Crystal structure of Era in complex with MgGDPNP and nucleotides 1506-1542 of 16S ribosomal RNA
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, CALCIUM ION, ...
著者Tu, C, Ji, X.
登録日2011-03-26
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3' end of 16S rRNA.
Proc.Natl.Acad.Sci.USA, 108, 2011
2QFL
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BU of 2qfl by Molmil
Structure of SuhB: Inositol monophosphatase and extragenic suppressor from E. coli
分子名称: ACETATE ION, ETHYL ACETATE, Inositol-1-monophosphatase
著者Wang, Y, Stieglitz, K.A, Bubunenko, M, Court, D, Stec, B, Roberts, M.F.
登録日2007-06-27
公開日2007-07-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of the R184A mutant of the inositol monophosphatase encoded by suhB and implications for its functional interactions in Escherichia coli.
J.Biol.Chem., 282, 2007
3D3C
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BU of 3d3c by Molmil
Structural and functional analysis of the E. coli NusB-S10 transcription antitermination complex.
分子名称: 30S ribosomal protein S10, N utilization substance protein B
著者Luo, X, Wahl, M.C.
登録日2008-05-09
公開日2009-01-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional analysis of the E. coli NusB-S10 transcription antitermination complex.
Mol.Cell, 32, 2008
3D3B
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BU of 3d3b by Molmil
Structural and functional analysis of the E. coli NusB-S10 transcription antitermination complex.
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 30S ribosomal protein S10, N utilization substance protein B
著者Luo, X, Wahl, M.C.
登録日2008-05-09
公開日2009-01-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural and functional analysis of the E. coli NusB-S10 transcription antitermination complex.
Mol.Cell, 32, 2008
1EGA
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BU of 1ega by Molmil
CRYSTAL STRUCTURE OF A WIDELY CONSERVED GTPASE ERA
分子名称: PROTEIN (GTP-BINDING PROTEIN ERA), SULFATE ION
著者Chen, X, Ji, X.
登録日1998-12-01
公開日1999-07-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of ERA: a GTPase-dependent cell cycle regulator containing an RNA binding motif.
Proc.Natl.Acad.Sci.USA, 96, 1999
3R2D
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BU of 3r2d by Molmil
Crystal Structure of Antitermination Factors NusB and NusE in complex with dsRNA
分子名称: 30S ribosomal protein S10, 5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3', DI(HYDROXYETHYL)ETHER, ...
著者Stagno, J.R, Ji, X.
登録日2011-03-14
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination.
Nucleic Acids Res., 39, 2011
3R2C
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Crystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNA
分子名称: 30S ribosomal protein S10, 5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3', ACETATE ION, ...
著者Stagno, J.R, Ji, X.
登録日2011-03-14
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination.
Nucleic Acids Res., 39, 2011
1EY1
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SOLUTION STRUCTURE OF ESCHERICHIA COLI NUSB
分子名称: ANTITERMINATION FACTOR NUSB
著者Altieri, A.S, Mazzulla, M.J, Horita, D.A, Coats, R.H, Wingfield, P.T, Byrd, R.A.
登録日2000-05-05
公開日2000-06-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of the transcriptional antiterminator NusB from Escherichia coli.
Nat.Struct.Biol., 7, 2000
1I4S
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CRYSTAL STRUCTURE OF RNASE III ENDONUCLEASE DOMAIN FROM AQUIFEX AEOLICUS AT 2.15 ANGSTROM RESOLUTION
分子名称: RIBONUCLEASE III
著者Blaszczyk, J, Ji, X.
登録日2001-02-22
公開日2001-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic and modeling studies of RNase III suggest a mechanism for double-stranded RNA cleavage.
Structure, 9, 2001

 

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