Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4XK0
DownloadVisualize
BU of 4xk0 by Molmil
Crystal structure of a tetramolecular RNA G-quadruplex in potassium
分子名称: BARIUM ION, POTASSIUM ION, RNA (5'-(*UP*GP*GP*GP*GP*U)-3')
著者Chen, M.C, Murat, P, Abecassis, K.A, Ferre-D'Amare, A.R, Balasubramanian, S.
登録日2015-01-09
公開日2015-02-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Insights into the mechanism of a G-quadruplex-unwinding DEAH-box helicase.
Nucleic Acids Res., 43, 2015
4LCQ
DownloadVisualize
BU of 4lcq by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with NCBI
分子名称: (2S)-3-(carbamoylamino)-2-methylpropanoic acid, ZINC ION, dihydropyrimidinase
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2013-06-22
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4LCR
DownloadVisualize
BU of 4lcr by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with NCBA
分子名称: Chromosome 8 SCAF14545, whole genome shotgun sequence, N-(AMINOCARBONYL)-BETA-ALANINE, ...
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2013-06-22
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4LCS
DownloadVisualize
BU of 4lcs by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with hydantoin
分子名称: Chromosome 8 SCAF14545, whole genome shotgun sequence, ZINC ION, ...
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S.
登録日2013-06-23
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4TS2
DownloadVisualize
BU of 4ts2 by Molmil
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ...
著者Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R.
登録日2014-06-18
公開日2014-07-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.884 Å)
主引用文献Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
4TS0
DownloadVisualize
BU of 4ts0 by Molmil
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, BARIUM ION, POTASSIUM ION, ...
著者Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R.
登録日2014-06-18
公開日2014-07-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
4H00
DownloadVisualize
BU of 4h00 by Molmil
The crystal structure of mon-Zn dihydropyrimidinase from Tetraodon nigroviridis
分子名称: ZINC ION, dihydropyrimidinase
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2012-09-06
公開日2013-09-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
4GZ7
DownloadVisualize
BU of 4gz7 by Molmil
The crystal structure of Apo-dihydropyrimidinase from Tetraodon nigroviridis
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, dihydropyrimidinase
著者Hsien, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2012-09-06
公開日2013-09-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lysine Carboxylation: Metal and Structure Requirements for Post-translational Modification
To be Published
4H01
DownloadVisualize
BU of 4h01 by Molmil
The crystal structure of di-Zn dihydropyrimidinase from Tetraodon nigroviridis
分子名称: ZINC ION, dihydropyrimidinase
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2012-09-06
公開日2013-09-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
4OX5
DownloadVisualize
BU of 4ox5 by Molmil
Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Hoyland, C.N, Aldridge, C, Cleverley, R.M, Sidiq, K, Duchene, M.C, Daniel, R.A, Vollmer, W, Lewis, R.J.
登録日2014-02-04
公開日2014-05-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition.
Structure, 22, 2014
4OXD
DownloadVisualize
BU of 4oxd by Molmil
Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition
分子名称: CHLORIDE ION, LYSINE, LdcB LD-carboxypeptidase, ...
著者Hoyland, C.N, Aldridge, C, Cleverley, R.M, Sidiq, K, Duchene, M.C, Daniel, R.A, Vollmer, W, Lewis, R.J.
登録日2014-02-05
公開日2014-05-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition.
Structure, 22, 2014
4OX3
DownloadVisualize
BU of 4ox3 by Molmil
Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition
分子名称: PHOSPHATE ION, Putative carboxypeptidase YodJ, ZINC ION
著者Hoyland, C.N, Aldridge, C, Cleverley, R.M, Sidiq, K, Duchene, M.C, Daniel, R.A, Vollmer, W, Lewis, R.J.
登録日2014-02-04
公開日2014-06-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition.
Structure, 22, 2014
5VHE
DownloadVisualize
BU of 5vhe by Molmil
DHX36 in complex with the c-Myc G-quadruplex
分子名称: DEAH (Asp-Glu-Ala-His) box polypeptide 36, DNA (5'-D(*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*TP*TP*TP*TP*T)-3'), POTASSIUM ION
著者Chen, M, Ferre-D'Amare, A.
登録日2017-04-13
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.793 Å)
主引用文献Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
5VHD
DownloadVisualize
BU of 5vhd by Molmil
DHX36 with an N-terminal truncation bound to ADP-AlF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, DEAH (Asp-Glu-Ala-His) box polypeptide 36, TETRAFLUOROALUMINATE ION
著者Chen, M, Ferre-D'Amare, A.
登録日2017-04-13
公開日2018-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
5VHC
DownloadVisualize
BU of 5vhc by Molmil
DHX36 with an N-terminal truncation bound to ADP-BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DEAH (Asp-Glu-Ala-His) box polypeptide 36, ...
著者Chen, M, Ferre-D'Amare, A.
登録日2017-04-12
公開日2018-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
5VHA
DownloadVisualize
BU of 5vha by Molmil
DHX36 with an N-terminal truncation
分子名称: DEAH (Asp-Glu-Ala-His) box polypeptide 36
著者Chen, M, Ferre-D'Amare, A.
登録日2017-04-12
公開日2018-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.227 Å)
主引用文献Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
7Y6W
DownloadVisualize
BU of 7y6w by Molmil
RRGSGG-AtPRT6 UBR box (I222)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-06-21
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7Y6Z
DownloadVisualize
BU of 7y6z by Molmil
RLGSGG-AtPRT6 UBR box (I222)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-06-21
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7XWG
DownloadVisualize
BU of 7xwg by Molmil
RSGSGG-AtPRT6 UBR box
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-05-26
公開日2023-05-31
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.832 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7XWE
DownloadVisualize
BU of 7xwe by Molmil
RRGSGG-AtPRT6 UBR box
分子名称: E3 ubiquitin-protein ligase PRT6, MAGNESIUM ION, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-05-26
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7XWF
DownloadVisualize
BU of 7xwf by Molmil
RLGSGG-AtPRT6 UBR box (highest resolution)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-05-26
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7Y70
DownloadVisualize
BU of 7y70 by Molmil
RLGSGG-AtPRT6 UBR box (P4332)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-06-21
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7XWD
DownloadVisualize
BU of 7xwd by Molmil
Apo-AtPRT6 UBR box
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-05-26
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7Y6Y
DownloadVisualize
BU of 7y6y by Molmil
RLGSGG-AtPRT6 UBR box (C121)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-06-21
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.543 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
7Y6X
DownloadVisualize
BU of 7y6x by Molmil
RRGSGG-AtPRT6 UBR box (P32)
分子名称: E3 ubiquitin-protein ligase PRT6, ZINC ION
著者Kim, L, Song, H.K.
登録日2022-06-21
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published

 

12>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon