Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2XDB
DownloadVisualize
BU of 2xdb by Molmil
A processed non-coding RNA regulates a bacterial antiviral system
分子名称: COBALT (II) ION, SULFATE ION, TOXI, ...
著者Blower, T.R, Pei, X.Y, Short, F.L, Fineran, P.C, Humphreys, D.P, Luisi, B.F, Salmond, G.P.C.
登録日2010-04-30
公開日2011-01-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A Processed Noncoding RNA Regulates an Altruistic Bacterial Antiviral System.
Nat.Struct.Mol.Biol., 18, 2011
2XD0
DownloadVisualize
BU of 2xd0 by Molmil
A processed non-coding RNA regulates a bacterial antiviral system
分子名称: TOXI, TOXN
著者Blower, T.R, Pei, X.Y, Short, F.L, Fineran, P.C, Humphreys, D.P, Luisi, B.F, Salmond, G.P.C.
登録日2010-04-28
公開日2011-01-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A processed noncoding RNA regulates an altruistic bacterial antiviral system.
Nat. Struct. Mol. Biol., 18, 2011
5BTL
DownloadVisualize
BU of 5btl by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methyl-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTG
DownloadVisualize
BU of 5btg by Molmil
Crystal structure of a topoisomerase II complex
分子名称: (3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTC
DownloadVisualize
BU of 5btc by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-02
公開日2016-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BS8
DownloadVisualize
BU of 5bs8 by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-01
公開日2016-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTI
DownloadVisualize
BU of 5bti by Molmil
Crystal structure of a topoisomerase II complex
分子名称: (3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTD
DownloadVisualize
BU of 5btd by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTF
DownloadVisualize
BU of 5btf by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTN
DownloadVisualize
BU of 5btn by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methyl-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTA
DownloadVisualize
BU of 5bta by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-02
公開日2016-03-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
8C45
DownloadVisualize
BU of 8c45 by Molmil
PglX methyltransferase from the Salmonella BREX phage defence system (aka BrxX)
分子名称: S-ADENOSYLMETHIONINE, site-specific DNA-methyltransferase (adenine-specific)
著者Blower, T.R, Went, S.C.
登録日2023-01-01
公開日2024-07-10
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure and rational engineering of the PglX methyltransferase and specificity factor for BREX phage defence.
Nat Commun, 15, 2024
2XDD
DownloadVisualize
BU of 2xdd by Molmil
A processed non-coding RNA regulates a bacterial antiviral system
分子名称: TOXI, TOXN, ZINC ION
著者Blower, T.R, Pei, X.Y, Short, F.L, Fineran, P.C, Humphreys, D.P, Luisi, B.F, Salmond, G.P.C.
登録日2010-04-30
公開日2011-01-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Phage Abortive Infection System, Toxin, Functions as a Protein-RNA Toxin-Antitoxin Pair.
Proc.Natl.Acad.Sci.USA, 106, 2009
6Y8Q
DownloadVisualize
BU of 6y8q by Molmil
AbiEi antitoxin from Streptococcus agalactiae
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Abortive phage infection protein
著者Blower, T.R, Beck, I.N.
登録日2020-03-05
公開日2020-12-16
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Antitoxin autoregulation of M. tuberculosis toxin-antitoxin expression through negative cooperativity arising from multiple inverted repeat sequences.
Biochem.J., 477, 2020
6Y5U
DownloadVisualize
BU of 6y5u by Molmil
MenT3 (aka TglT), nucleotidyltransferase toxin Rv1045 from Mycobacterium tuberculosis
分子名称: Rv1045
著者Blower, T.R, Usher, B.
登録日2020-02-25
公開日2020-09-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献A nucleotidyltransferase toxin inhibits growth of Mycobacterium tuberculosis through inactivation of tRNA acceptor stems.
Sci Adv, 6, 2020
9NV3
DownloadVisualize
BU of 9nv3 by Molmil
Hybrid model of a complex of BREX proteins BrxB and PglZ from Salmonella typhimurium
分子名称: DUF1788 domain-containing protein, PglZ domain-containing protein
著者Doyle, L.A, Stoddard, B, Blower, T.R, Kaiser, B.
登録日2025-03-20
公開日2025-07-02
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (4.45 Å)
主引用文献PglZ from Type I BREX phage defence systems is a metal-dependent nuclease that forms a sub-complex with BrxB.
Nucleic Acids Res., 53, 2025
7ZGE
DownloadVisualize
BU of 7zge by Molmil
BrxA, BREX phage defence protein
分子名称: BrxA, BREX phage defence protein
著者Picton, D.M, Beck, I.N, Blower, T.R.
登録日2022-04-03
公開日2022-06-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of the anti-CRISPR repressor Aca2.
J.Struct.Biol., 213, 2021
8RR5
DownloadVisualize
BU of 8rr5 by Molmil
MenT1 toxin (rv0078a) from Mycobacterium tuberculosis H37Rv, phosphorylated at T39
分子名称: Nucleotidyl transferase AbiEii/AbiGii toxin family protein
著者Arrowsmith, T.J, Blower, T.R.
登録日2024-01-22
公開日2024-09-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Inducible auto-phosphorylation regulates a widespread family of nucleotidyltransferase toxins.
Nat Commun, 15, 2024
8RR6
DownloadVisualize
BU of 8rr6 by Molmil
MenT3 (aka TglT) toxin (Rv1045) from Mycobacterium tuberculosis H37Rv, non-phosphorylated
分子名称: Nucleotidyl transferase AbiEii/AbiGii toxin family protein
著者Arrowsmith, T.J, Blower, T.R.
登録日2024-01-22
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Inducible auto-phosphorylation regulates a widespread family of nucleotidyltransferase toxins.
Nat Commun, 15, 2024
8Q56
DownloadVisualize
BU of 8q56 by Molmil
PglX methyltransferase of Salmonella BREX phage defence system (aka BrxX) bound to inhibitor Ocr
分子名称: Protein Ocr, S-ADENOSYLMETHIONINE, site-specific DNA-methyltransferase (adenine-specific)
著者Went, S.C, Blower, T.R.
登録日2023-08-08
公開日2024-08-21
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure and rational engineering of the PglX methyltransferase and specificity factor for BREX phage defence.
Nat Commun, 15, 2024
7QFZ
DownloadVisualize
BU of 7qfz by Molmil
BrxR, a WYL-domain containing transcriptional regulator
分子名称: SULFATE ION, WYL domain-containing protein
著者Picton, D.M, Blower, T.R.
登録日2021-12-07
公開日2022-05-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A widespread family of WYL-domain transcriptional regulators co-localizes with diverse phage defence systems and islands.
Nucleic Acids Res., 50, 2022
4ATO
DownloadVisualize
BU of 4ato by Molmil
New insights into the mechanism of bacterial Type III toxin-antitoxin systems: selective toxin inhibition by a non-coding RNA pseudoknot
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, TOXI, TOXN
著者Short, F.L, Pei, X.Y, Blower, T.R, Ong, S.L, Luisi, B.F, Salmond, G.P.C.
登録日2012-05-09
公開日2012-12-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selectivity and Self-Assembly in the Control of a Bacterial Toxin by an Antitoxic Noncoding RNA Pseudoknot.
Proc.Natl.Acad.Sci.USA, 110, 2013
7B5J
DownloadVisualize
BU of 7b5j by Molmil
Anti-CRISPR associated (Aca) protein, Aca2
分子名称: Anti-CRISPR associated (Aca) protein, Aca2, GLYCEROL
著者Usher, B, Birkholz, N, Fineran, P.C, Blower, T.R.
登録日2020-12-03
公開日2021-06-23
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of the anti-CRISPR repressor Aca2.
J.Struct.Biol., 213, 2021
7P9K
DownloadVisualize
BU of 7p9k by Molmil
BrxU, GmrSD-family Type IV restriction enzyme
分子名称: CHLORIDE ION, DUF262 domain-containing protein, GLYCEROL, ...
著者Picton, D.M, Luyten, Y, Morgan, R.D, Nelson, A, Smith, D.L, Dryden, D.T.F, Hinton, J.C.D, Blower, T.R.
登録日2021-07-27
公開日2021-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses.
Nucleic Acids Res., 49, 2021
7P9M
DownloadVisualize
BU of 7p9m by Molmil
BrxU, GmrSD-family Type IV restriction enzyme
分子名称: CHLORIDE ION, DUF262 domain-containing protein, SULFATE ION
著者Picton, D.M, Luyten, Y, Morgan, R.D, Nelson, A, Smith, D.L, Dryden, D.T.F, Hinton, J.C.D, Blower, T.R.
登録日2021-07-27
公開日2021-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses.
Nucleic Acids Res., 49, 2021

 

12>

238895

件を2025-07-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon