Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1FIP
DownloadVisualize
BU of 1fip by Molmil
THE STRUCTURE OF FIS MUTANT PRO61ALA ILLUSTRATES THAT THE KINK WITHIN THE LONG ALPHA-HELIX IS NOT DUE TO THE PRESENCE OF THE PROLINE RESIDUE
分子名称: FACTOR FOR INVERSION STIMULATION (FIS), UNKNOWN PEPTIDE, POSSIBLY PART OF THE UNOBSERVED RESIDUES IN ENTITY 1
著者Yuan, H.S, Wang, S.S, Yang, W.-Z, Finkel, S.E, Johnson, R.C.
登録日1994-09-26
公開日1995-02-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of Fis mutant Pro61Ala illustrates that the kink within the long alpha-helix is not due to the presence of the proline residue.
J.Biol.Chem., 269, 1994
3FIS
DownloadVisualize
BU of 3fis by Molmil
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
分子名称: FACTOR FOR INVERSION STIMULATION (FIS)
著者Yuan, H.S, Finkel, S.E, Feng, J-A, Johnson, R.C, Dickerson, R.E.
登録日1991-08-12
公開日1993-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
4FIS
DownloadVisualize
BU of 4fis by Molmil
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
分子名称: FACTOR FOR INVERSION STIMULATION (FIS)
著者Yuan, H.S, Finkel, S.E, Feng, J.-A, Johnson, R.C, Dickerson, R.E.
登録日1991-08-12
公開日1993-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
1OUO
DownloadVisualize
BU of 1ouo by Molmil
Crystal structure of the periplasmic endonuclease Vvn
分子名称: MAGNESIUM ION, Nuclease
著者Yuan, H.S, Li, C.L.
登録日2003-03-25
公開日2003-08-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active site.
Embo J., 22, 2003
1OUP
DownloadVisualize
BU of 1oup by Molmil
Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA
分子名称: 5'-D(*GP*CP*GP*AP*TP*C)-3', 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', 5'-D(P*GP*C)-3', ...
著者Yuan, H.S, Li, C.-L.
登録日2003-03-25
公開日2003-08-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active site.
Embo J., 22, 2003
3S5B
DownloadVisualize
BU of 3s5b by Molmil
Crystal Structure of CED-3 Protease Suppressor-6 (CPS-6) from Caenorhabditis elegans
分子名称: Endonuclease G, MAGNESIUM ION
著者Yuan, H.S, Lin, J.L.J.
登録日2011-05-23
公開日2012-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural insights into apoptotic DNA degradation by CED-3 protease suppressor-6 (CPS-6) from Caenorhabditis elegans
J.Biol.Chem., 287, 2012
5ZF6
DownloadVisualize
BU of 5zf6 by Molmil
Crystal structure of the dimeric human PNPase
分子名称: Polyribonucleotide nucleotidyltransferase 1, mitochondrial
著者Yuan, H.S, Golzarroshan, B.
登録日2018-03-02
公開日2018-08-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献Crystal structure of dimeric human PNPase reveals why disease-linked mutants suffer from low RNA import and degradation activities.
Nucleic Acids Res., 46, 2018
3CDJ
DownloadVisualize
BU of 3cdj by Molmil
Crystal structure of the E. coli KH/S1 domain truncated PNPase
分子名称: Polynucleotide phosphorylase
著者Shi, Z, Yang, W.Z, Lin-Chao, S, Chak, K.F, Yuan, H.S.
登録日2008-02-27
公開日2008-12-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.
Rna, 14, 2008
3CDI
DownloadVisualize
BU of 3cdi by Molmil
Crystal structure of E. coli PNPase
分子名称: Polynucleotide phosphorylase
著者Shi, Z, Yang, W.Z, Lin-Chao, S, Chak, K.F, Yuan, H.S.
登録日2008-02-27
公開日2008-12-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.
Rna, 14, 2008
3CG7
DownloadVisualize
BU of 3cg7 by Molmil
Crystal structure of cell-death related nuclease 4 (CRN-4)
分子名称: Cell death-related nuclease 4, ZINC ION
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2008-03-05
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of CRN-4: implications for domain function in apoptotic DNA degradation
Mol.Cell.Biol., 29, 2009
3U1K
DownloadVisualize
BU of 3u1k by Molmil
Crystal structure of human PNPase
分子名称: CITRIC ACID, Polyribonucleotide nucleotidyltransferase 1, mitochondrial
著者Lin, C.L, Yuan, H.S.
登録日2011-09-30
公開日2012-02-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of human polynucleotide phosphorylase: insights into its domain function in RNA binding and degradation
Nucleic Acids Res., 40, 2012
5XGU
DownloadVisualize
BU of 5xgu by Molmil
Escherichia coli. RNase R
分子名称: MAGNESIUM ION, Ribonuclease R
著者Chu, L.Y, Hsieh, T.J, Yuan, H.S.
登録日2017-04-17
公開日2017-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.846 Å)
主引用文献Structural insights into RNA unwinding and degradation by RNase R.
Nucleic Acids Res., 45, 2017
3KRN
DownloadVisualize
BU of 3krn by Molmil
Crystal Structure of C. elegans cell-death-related nuclease 5(CRN-5)
分子名称: Protein C14A4.5, confirmed by transcript evidence
著者Yang, C.-C, Wang, Y.-T, Hsiao, Y.-Y, Doudeva, L.G, Chow, S.Y, Yuan, H.S.
登録日2009-11-19
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.918 Å)
主引用文献Structural and biochemical characterization of CRN-5 and Rrp46: an exosome component participating in apoptotic DNA degradation
Rna, 16, 2010
4Y00
DownloadVisualize
BU of 4y00 by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(P*TP*TP*GP*AP*GP*CP*GP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Yang, W.Z, Yuan, H.S.
登録日2015-02-05
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
4Y0F
DownloadVisualize
BU of 4y0f by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S.
登録日2015-02-06
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.648 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
1UNK
DownloadVisualize
BU of 1unk by Molmil
STRUCTURE OF COLICIN E7 IMMUNITY PROTEIN
分子名称: COLICIN E7
著者Ko, T.-P, Hsieh, S.-Y, Ku, W.-Y, Tseng, M.-Y, Chak, K.-F, Yuan, H.S.
登録日1996-06-21
公開日1998-01-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel role of ImmE7 in the autoregulatory expression of the ColE7 operon and identification of possible RNase active sites in the crystal structure of dimeric ImmE7.
EMBO J., 16, 1997
1M08
DownloadVisualize
BU of 1m08 by Molmil
Crystal structure of the unbound nuclease domain of ColE7
分子名称: Colicin E7, PHOSPHATE ION, ZINC ION
著者Cheng, Y.S, Hsia, K.C, Doudeva, L.G, Chak, K.F, Yuan, H.S.
登録日2002-06-12
公開日2002-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of the Nuclease Domain of Colicin E7 Suggests a Mechanism for Binding to Double-stranded DNA by the H-N-H Endonucleases
J.mol.biol., 324, 2002
1MVE
DownloadVisualize
BU of 1mve by Molmil
Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
分子名称: CALCIUM ION, Truncated 1,3-1,4-beta-D-glucanase
著者Tsai, L.-C, Shyur, L.-F, Lee, S.-H, Lin, S.-S, Yuan, H.S.
登録日2002-09-25
公開日2003-07-15
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of a Natural Circularly Permuted Jellyroll Protein: 1,3-1,4-beta-D-Glucanase from Fibrobacter succinogenes.
J.Mol.Biol., 330, 2003
1MZ8
DownloadVisualize
BU of 1mz8 by Molmil
CRYSTAL STRUCTURES OF THE NUCLEASE DOMAIN OF COLE7/IM7 IN COMPLEX WITH A PHOSPHATE ION AND A ZINC ION
分子名称: Colicin E7, Colicin E7 immunity protein, PHOSPHATE ION, ...
著者Sui, M.J, Tsai, L.C, Hsia, K.C, Doudeva, L.G, Ku, W.Y, Han, G.W, Yuan, H.S.
登録日2002-10-07
公開日2002-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal ions and phosphate binding in the H-N-H motif: crystal structures of the nuclease domain of ColE7/Im7 in complex with a phosphate ion and different divalent metal ions
PROTEIN SCI., 11, 2002
1PT3
DownloadVisualize
BU of 1pt3 by Molmil
Crystal structures of nuclease-ColE7 complexed with octamer DNA
分子名称: 5'-GCGATCGC-3', Colicin E7
著者Hsia, K.C, Chak, K.F, Cheng, Y.S, Ku, W.Y, Yuan, H.S.
登録日2003-06-22
公開日2004-03-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA binding and degradation by the HNH protein ColE7.
STRUCTURE, 12, 2004
3FBD
DownloadVisualize
BU of 3fbd by Molmil
Crystal structure of the nuclease domain of COLE7(D493Q mutant) in complex with an 18-BP duplex DNA
分子名称: 5'-D(*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DAP*DTP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DC)-3', Colicin-E7
著者Wang, Y.T, Doudeva, L.G, Yuan, H.S.
登録日2008-11-19
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Redesign of high-affinity nonspecific nucleases with altered sequence preference
To be Published
3CM5
DownloadVisualize
BU of 3cm5 by Molmil
Crystal structure of Cell-Death Related Nuclease 4 (CRN-4) bound with Mn
分子名称: Cell death-related nuclease 4, MANGANESE (II) ION, ZINC ION
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2008-03-21
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of CRN-4: implications for domain function in apoptotic DNA degradation
Mol.Cell.Biol., 29, 2009
3D2W
DownloadVisualize
BU of 3d2w by Molmil
Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA
分子名称: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43
著者Kuo, P.H, Yuan, H.S.
登録日2008-05-09
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into TDP-43 in nucleic-acid binding and domain interactions
Nucleic Acids Res., 37, 2009
3CM6
DownloadVisualize
BU of 3cm6 by Molmil
Crystal structure of cell-death related nuclease 4 (CRN-4) bound with Er
分子名称: Cell death-related nuclease 4, ERBIUM (III) ION, ZINC ION
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2008-03-21
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of CRN-4: implications for domain function in apoptotic DNA degradation
Mol.Cell.Biol., 29, 2009
4QN0
DownloadVisualize
BU of 4qn0 by Molmil
Crystal structure of the CPS-6 mutant Q130K
分子名称: Endonuclease G, mitochondrial, MAGNESIUM ION
著者Lin, J.L.J, Yuan, H.S.
登録日2014-06-17
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Oxidative Stress Impairs Cell Death by Repressing the Nuclease Activity of Mitochondrial Endonuclease G
Cell Rep, 16, 2016

 

1234>

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon