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1WQ2
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BU of 1wq2 by Molmil
Neutron Crystal Structure Of Dissimilatory Sulfite Reductase D (DsrD)
分子名称: Protein dsvD, SULFATE ION
著者Chatake, T, Mizuno, N, Voordouw, G, Higuchi, Y, Arai, S, Tanaka, I, Niimura, N.
登録日2004-09-19
公開日2005-09-19
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (2.4 Å)
主引用文献Crystallization and preliminary neutron analysis of the dissimilatory sulfite reductase D (DsrD) protein from the sulfate-reducing bacterium Desulfovibrio vulgaris.
Acta Crystallogr.,Sect.D, 59, 2003
1EDR
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BU of 1edr by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG) AT 1.6 ANGSTROM
分子名称: 5'-D(*CP*GP*CP*GP*(A47)AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION, SPERMINE
著者Chatake, T, Hikima, T, Ono, A, Ueno, Y, Matsuda, A, Takenaka, A.
登録日2000-01-28
公開日2000-02-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic studies on damaged DNAs. II. N(6)-methoxyadenine can present two alternate faces for Watson-Crick base-pairing, leading to pyrimidine transition mutagenesis.
J.Mol.Biol., 294, 1999
1WOE
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BU of 1woe by Molmil
X-ray structure of a Z-DNA hexamer d(CGCGCG)
分子名称: SPERMINE, Z-DNA hexamer
著者Chatake, T, Tanaka, I, Umino, H, Arai, S, Niimura, N.
登録日2004-08-15
公開日2005-07-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The hydration structure of a Z-DNA hexameric duplex determined by a neutron diffraction technique.
Acta Crystallogr.,Sect.D, 61, 2005
4FS5
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BU of 4fs5 by Molmil
Crystal structure of the Z-DNA hexamer CGCGCG at 500 mM MgCl2
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Chatake, T, Sunami, T.
登録日2012-06-26
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Direct interactions between Z-DNA and alkaline earth cations, discovered in the presence of high concentrations of MgCl2 and CaCl2
J.Inorg.Biochem., 124, 2013
4FS6
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BU of 4fs6 by Molmil
Crystal structure of the Z-DNA hexamer CGCGCG at 500 mM CaCl2
分子名称: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Chatake, T, Sunami, T.
登録日2012-06-27
公開日2013-05-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Direct interactions between Z-DNA and alkaline earth cations, discovered in the presence of high concentrations of MgCl2 and CaCl2
J.Inorg.Biochem., 124, 2013
7VEI
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BU of 7vei by Molmil
Neutron structure of D2O-solvent lysozyme
分子名称: CHLORIDE ION, Lysozyme C, NICKEL (II) ION
著者Chatake, T, Tanaka, I, Kusaka, K, Fujiwara, S.
登録日2021-09-08
公開日2022-04-06
最終更新日2023-11-29
実験手法NEUTRON DIFFRACTION (2 Å)
主引用文献Protonation states of hen egg-white lysozyme observed using D/H contrast neutron crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
5D97
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BU of 5d97 by Molmil
Neutron crystal structure of H2O-solvent ribonuclease A
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Chatake, T, Fujiwara, S.
登録日2015-08-18
公開日2016-04-06
最終更新日2018-12-05
実験手法NEUTRON DIFFRACTION (1.8 Å)
主引用文献A technique for determining the deuterium/hydrogen contrast map in neutron macromolecular crystallography
Acta Crystallogr D Struct Biol, 72, 2016
5D6U
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BU of 5d6u by Molmil
X-ray crystal structure of ribonuclease A determined for the real space D/H contrast method
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Chatake, T, Fujiwara, S.
登録日2015-08-13
公開日2016-04-06
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献A technique for determining the deuterium/hydrogen contrast map in neutron macromolecular crystallography
Acta Crystallogr D Struct Biol, 72, 2016
457D
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BU of 457d by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG): N6-METHOXYADENOSINE/ THYMIDINE BASE-PAIRS IN B-DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*(A47)P*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Chatake, T, Ono, A, Ueno, Y, Matsuda, A, Takenaka, A.
登録日1999-03-06
公開日2000-01-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic studies on damaged DNAs. II. N(6)-methoxyadenine can present two alternate faces for Watson-Crick base-pairing, leading to pyrimidine transition mutagenesis.
J.Mol.Biol., 294, 1999
456D
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BU of 456d by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATCCGCG): THE WATSON-CRICK TYPE N6-METHOXYADENOSINE/CYTIDINE BASE-PAIRS IN B-DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*(A47)P*AP*TP*CP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Chatake, T, Ono, A, Ueno, Y, Matsuda, A, Takenaka, A.
登録日1999-03-06
公開日2000-01-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic studies on damaged DNAs. I. An N(6)-methoxyadenine residue forms a Watson-Crick pair with a cytosine residue in a B-DNA duplex.
J.Mol.Biol., 294, 1999
4ZZ4
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BU of 4zz4 by Molmil
Neutron crystal structure of ribonuclease A determined by the real space D/H contrast method
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Chatake, T, Fujiwara, S.
登録日2015-05-22
公開日2016-04-06
最終更新日2023-11-08
実験手法NEUTRON DIFFRACTION (1.798 Å)
主引用文献A technique for determining the deuterium/hydrogen contrast map in neutron macromolecular crystallography
Acta Crystallogr D Struct Biol, 72, 2016
1V9G
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BU of 1v9g by Molmil
Neutron Crystallographic analysis of the Z-DNA hexamer CGCGCG
分子名称: 5'-D(*CP*GP*CP*GP*CP*G)-3', N,N'-BIS(3-AMMONIOPROPYL)BUTANE-1,4-DIAMINIUM
著者Chatake, T, Tanaka, I, Niimura, N.
登録日2004-01-26
公開日2005-01-26
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (1.8 Å)
主引用文献The hydration structure of a Z-DNA hexameric duplex determined by a neutron diffraction technique.
Acta Crystallogr.,Sect.D, 61, 2005
3AJ9
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BU of 3aj9 by Molmil
X-ray analysis of Crystal of Proteinase K Obtained from D2O Solution Using PEG 8000
分子名称: CALCIUM ION, GLYCEROL, Proteinase K
著者Chatake, T, Ishikawa, T, Morimoto, Y.
登録日2010-05-27
公開日2011-06-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution X-ray study of the effects of deuteration on crystal growth and the crystal structure of proteinase K
Acta Crystallogr.,Sect.F, 67, 2011
3AJ8
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BU of 3aj8 by Molmil
X-ray analysis of Crystal of Proteinase K Obtained from H2O Solution Using PEG 8000
分子名称: CALCIUM ION, GLYCEROL, Proteinase K
著者Chatake, T, Ishikawa, T, Morimoto, Y.
登録日2010-05-27
公開日2011-06-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution X-ray study of the effects of deuteration on crystal growth and the crystal structure of proteinase K
Acta Crystallogr.,Sect.F, 67, 2011
3WBO
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BU of 3wbo by Molmil
Crystal Structure Analysis of the Z-DNA hexamer CGCGCG with 40 mM NaCl
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Chatake, T.
登録日2013-05-20
公開日2014-05-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Structural fluctuation observed in Z-DNA d(CGCGCG)2 in the absence of divalent metal cations and polyamines
J.SYNCHROTRON RADIAT., 20, 2013
7FCW
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BU of 7fcw by Molmil
X-ray structure of H2O-solvent lysozyme
分子名称: CHLORIDE ION, Lysozyme C, NICKEL (II) ION
著者Chatake, T, Tanaka, I, Kusaka, K, Fujiwara, S.
登録日2021-07-15
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Protonation states of hen egg-white lysozyme observed using D/H contrast neutron crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7FCU
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BU of 7fcu by Molmil
X-ray structure of D2O-solvent lysozyme
分子名称: CHLORIDE ION, Lysozyme C, NICKEL (II) ION
著者Chatake, T, Tanaka, I, Kusaka, K, Fujiwara, S.
登録日2021-07-15
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Protonation states of hen egg-white lysozyme observed using D/H contrast neutron crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
1IU5
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BU of 1iu5 by Molmil
X-ray Crystal Structure of the rubredoxin mutant from Pyrococcus Furiosus
分子名称: FE (III) ION, rubredoxin
著者Chatake, T, Kurihara, K, Tanaka, I, Tsyba, I, Bau, R, Jenney, F.E, Adams, M.W.W, Niimura, N.
登録日2002-02-27
公開日2002-08-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1IU6
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BU of 1iu6 by Molmil
Neutron Crystal Structure of the rubredoxin mutant from Pyrococcus Furiosus
分子名称: FE (III) ION, rubredoxin
著者Chatake, T, Kurihara, K, Tanaka, I, Tsyba, I, Bau, R, Jenney, F.E, Adams, M.W.W, Niimura, N.
登録日2002-02-27
公開日2002-08-27
最終更新日2023-12-27
実験手法NEUTRON DIFFRACTION (1.6 Å)
主引用文献A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
4DWW
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BU of 4dww by Molmil
Crystal Structure of Nattokinase from Bacillus subtilis natto
分子名称: CALCIUM ION, Subtilisin NAT
著者Chatake, T, Yanagisawa, Y.
登録日2012-02-27
公開日2012-03-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Purification, crystallization and preliminary X-ray diffraction experiment of nattokinase from Bacillus subtilis natto
Acta Crystallogr.,Sect.F, 66, 2010
3KMF
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BU of 3kmf by Molmil
Room Temperature Time-of-Flight Neutron Diffraction Study of Deoxy Human Normal Adult Hemoglobin
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Kovalevsky, A.Y, Morimoto, Y, Chatake, T.
登録日2009-11-10
公開日2010-04-21
最終更新日2023-11-01
実験手法NEUTRON DIFFRACTION (2 Å)
主引用文献Direct Determination of Protonation States of Histidine Residues in a 2 A Neutron Structure of Deoxy-Human Normal Adult Hemoglobin and Implications for the Bohr Effect.
J.Mol.Biol., 398, 2010
3FE0
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BU of 3fe0 by Molmil
X-ray crystal structure of wild type human lysozyme in D2O
分子名称: Lysozyme C
著者Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N.
登録日2008-11-27
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme hydrogen
To be Published
7BR5
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BU of 7br5 by Molmil
Lysozyme-sugar complex in H2O
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
著者Tanaka, I, Chatake, T.
登録日2020-03-26
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Recent structural insights into the mechanism of lysozyme hydrolysis.
Acta Crystallogr D Struct Biol, 77, 2021
1WQZ
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BU of 1wqz by Molmil
Complicated water orientations in the minor groove of B-DNA decamer D(CCATTAATGG)2 observed by neutron diffraction measurements
分子名称: 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'
著者Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N.
登録日2004-10-07
公開日2005-06-21
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (3 Å)
主引用文献Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
1WQY
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BU of 1wqy by Molmil
X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution
分子名称: 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'
著者Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N.
登録日2004-10-07
公開日2005-06-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005

 

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