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3A02
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BU of 3a02 by Molmil
Crystal structure of Aristaless homeodomain
分子名称: CADMIUM ION, CHLORIDE ION, Homeobox protein aristaless
著者Miyazono, K, Nagata, K, Saigo, K, Kojima, T, Tanokura, M.
登録日2009-02-28
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless
Embo J., 29, 2010
2ZZI
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BU of 2zzi by Molmil
Crystal structure of TTHA1623 in a di-iron-bound form
分子名称: ACETATE ION, FE (III) ION, Metallo-beta-lactamase superfamily protein
著者Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
登録日2009-02-16
公開日2010-01-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
3A2E
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BU of 3a2e by Molmil
Crystal structure of ginkbilobin-2, the novel antifungal protein from Ginkgo biloba seeds
分子名称: Ginkbilobin-2
著者Miyakawa, T, Miyazono, K, Sawano, Y, Hatano, K, Tanokura, M.
登録日2009-05-13
公開日2009-06-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of ginkbilobin-2 with homology to the extracellular domain of plant cysteine-rich receptor-like kinases
Proteins, 77, 2009
3A4I
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BU of 3a4i by Molmil
Crystal structure of GMP synthetase PH1347 from Pyrococcus horikoshii OT3
分子名称: GMP synthase [glutamine-hydrolyzing] subunit B
著者Maruoka, S, Horita, S, Lee, W.C, Nagata, K, Tanokura, M.
登録日2009-07-07
公開日2009-07-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of the ATPPase subunit and its substrate-dependent association with the GATase Subunit: a novel regulatory mechanism for a two-subunit-type GMP synthetase from Pyrococcus horikoshii OT3.
J.Mol.Biol., 395, 2010
2ZTS
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BU of 2zts by Molmil
Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative uncharacterized protein PH0186
著者Ming, H, Miyazono, K, Tanokura, M.
登録日2008-10-08
公開日2009-03-24
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3
Proteins, 75, 2009
3ADF
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BU of 3adf by Molmil
Crystal structure of a monomeric green fluorescent protein, Azami-Green (mAG)
分子名称: Monomeric Azami Green
著者Ebisawa, T, Yamamura, A, Kameda, Y, Hayakawa, K, Nagata, K, Tanokura, M.
登録日2010-01-20
公開日2010-05-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structure of mAG, a monomeric mutant of the green fluorescent protein Azami-Green, reveals the structural basis of its stable green emission
Acta Crystallogr.,Sect.F, 66, 2010
2ZO4
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BU of 2zo4 by Molmil
Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus thermophilus HB8
分子名称: Metallo-beta-lactamase family protein, ZINC ION
著者Yamamura, A, Nagata, K, Agari, Y, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, Tanokura, M.
登録日2008-05-05
公開日2009-03-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.
Proteins, 73, 2008
3D79
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BU of 3d79 by Molmil
Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3
分子名称: Putative uncharacterized protein PH0734
著者Nishimura, Y, Miyazono, K, Sawano, Y, Makino, T, Nagata, K, Tanokura, M.
登録日2008-05-20
公開日2008-12-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 73, 2008
1NTD
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BU of 1ntd by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE MUTANT M150E THAT CONTAINS ZINC
分子名称: COPPER (II) ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1995-07-03
公開日1996-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Alcaligenes faecalis nitrite reductase and a copper site mutant, M150E, that contains zinc.
Biochemistry, 34, 1995
1BI6
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BU of 1bi6 by Molmil
NMR STRUCTURE OF BROMELAIN INHIBITOR VI FROM PINEAPPLE STEM
分子名称: BROMELAIN INHIBITOR VI
著者Hatano, K.-I.
登録日1995-12-07
公開日1996-04-03
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of bromelain inhibitor IV from pineapple stem: structural similarity with Bowman-Birk trypsin/chymotrypsin inhibitor from soybean.
Biochemistry, 35, 1996
2BI6
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BU of 2bi6 by Molmil
NMR STUDY OF BROMELAIN INHIBITOR VI FROM PINEAPPLE STEM
分子名称: BROMELAIN INHIBITOR VI
著者Hatano, K.-I.
登録日1995-12-07
公開日1996-04-03
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of bromelain inhibitor IV from pineapple stem: structural similarity with Bowman-Birk trypsin/chymotrypsin inhibitor from soybean.
Biochemistry, 35, 1996
1Y43
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BU of 1y43 by Molmil
crystal structure of aspergilloglutamic peptidase from Aspergillus niger
分子名称: Aspergillopepsin II heavy chain, Aspergillopepsin II light chain, SULFATE ION
著者Sasaki, H, Nakagawa, A, Iwata, S, Muramatsu, T, Suganuma, M, Sawano, Y, Kojima, M, Kubota, K, Takahashi, K.
登録日2004-11-30
公開日2005-12-13
最終更新日2013-02-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The three-dimensional structure of aspergilloglutamic peptidase from Aspergillus niger
Proc.Jpn.Acad.,Ser.B, 80, 2004
2AFN
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BU of 2afn by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE AND A COPPER SITE MUTANT, M150E, THAT CONTAINS ZINC
分子名称: COPPER (II) ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1995-07-03
公開日1996-08-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Alcaligenes faecalis nitrite reductase and a copper site mutant, M150E, that contains zinc.
Biochemistry, 34, 1995
6JQ9
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BU of 6jq9 by Molmil
Crystal structure of a lyase from Alteromonas sp.
分子名称: CALCIUM ION, SULFATE ION, Short ulvan lyase
著者Qin, H.M, Guo, Q.Q.
登録日2019-03-29
公開日2020-04-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Biochemical characterization and structural analysis of ulvan lyase from marine Alteromonas sp. reveals the basis for its salt tolerance.
Int.J.Biol.Macromol., 147, 2020
3SYU
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BU of 3syu by Molmil
Re-refined coordinates for pdb entry 1det - ribonuclease T1 carboxymethylated at GLU 58 in complex with 2'GMP
分子名称: GUANOSINE-2'-MONOPHOSPHATE, Guanyl-specific ribonuclease T1, SODIUM ION, ...
著者Smart, O.S, Womack, T.O, Bricogne, G.
登録日2011-07-18
公開日2012-03-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER.
Acta Crystallogr.,Sect.D, 68, 2012
5BUP
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BU of 5bup by Molmil
Crystal structure of the ZP-C domain of mouse ZP2
分子名称: ACETATE ION, Zona pellucida sperm-binding protein 2
著者Nishimura, K, Jovine, L.
登録日2015-06-04
公開日2016-01-27
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献A structured interdomain linker directs self-polymerization of human uromodulin.
Proc.Natl.Acad.Sci.USA, 113, 2016
5B5I
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BU of 5b5i by Molmil
The crystal structure of a crustacean hyperglycemic hormone precursor from the kuruma prawn
分子名称: Crustacean hyperglycemic hormones 1, ETHANOL
著者Tsutsui, N, Nagata, K.
登録日2016-05-10
公開日2016-10-19
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Crystal structure of a crustacean hyperglycemic hormone (CHH) precursor suggests structural variety in the C-terminal regions of CHH superfamily members.
FEBS J., 283, 2016
1AQ8
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BU of 1aq8 by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE REDUCED WITH ASCORBATE
分子名称: COPPER (II) ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1997-08-07
公開日1998-02-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications.
J.Biol.Chem., 272, 1997
1AS8
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BU of 1as8 by Molmil
STRUCTURE OF NITRITE BOUND TO REDUCED ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE
分子名称: COPPER (II) ION, NITRITE ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1997-08-13
公開日1998-02-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications.
J.Biol.Chem., 272, 1997
1AS7
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BU of 1as7 by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE
分子名称: COPPER (II) ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1997-08-13
公開日1998-02-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications.
J.Biol.Chem., 272, 1997
1AS6
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BU of 1as6 by Molmil
STRUCTURE OF NITRITE BOUND TO OXIDIZED ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE
分子名称: COPPER (II) ION, NITRITE ION, NITRITE REDUCTASE
著者Murphy, M.E.P, Adman, E.T, Turley, S.
登録日1997-08-13
公開日1998-02-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications.
J.Biol.Chem., 272, 1997
2Z98
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BU of 2z98 by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Oxidized AzoR in tetragonal crystals (The resolution has improved from 1.8 (1v4b) to 1.4 angstrom)
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
2Z9C
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BU of 2z9c by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: AzoR in complex with dicoumarol
分子名称: BISHYDROXY[2H-1-BENZOPYRAN-2-ONE,1,2-BENZOPYRONE], FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase, ...
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
2Z9D
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BU of 2z9d by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Oxidized AzoR in orthorhombic crystals
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
2Z9B
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BU of 2z9b by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Reduced AzoR in tetragonal crystals
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008

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