2ZZW
| Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Zinc and Lactate | 分子名称: | ABC transporter, solute-binding protein, LACTIC ACID, ... | 著者 | Akiyama, N, Takeda, K, Miki, K. | 登録日 | 2009-02-27 | 公開日 | 2009-08-11 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Crystal structure of a periplasmic substrate-binding protein in complex with calcium lactate J.Mol.Biol., 392, 2009
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3AAC
| Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form II crystal | 分子名称: | Putative uncharacterized protein ST1653 | 著者 | Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K. | 登録日 | 2009-11-13 | 公開日 | 2010-11-17 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0 J.Struct.Biol., 174, 2011
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3A5D
| Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase | 分子名称: | V-type ATP synthase alpha chain, V-type ATP synthase beta chain, V-type ATP synthase subunit D, ... | 著者 | Numoto, N, Hasegawa, Y, Takeda, K, Miki, K. | 登録日 | 2009-08-06 | 公開日 | 2009-10-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (4.8 Å) | 主引用文献 | Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase Embo Rep., 10, 2009
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3AAB
| Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form I crystal | 分子名称: | GLYCEROL, ISOPROPYL ALCOHOL, Putative uncharacterized protein ST1653 | 著者 | Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K. | 登録日 | 2009-11-13 | 公開日 | 2010-11-17 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.851 Å) | 主引用文献 | Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0 J.Struct.Biol., 174, 2011
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2ZHG
| Crystal structure of SoxR in complex with DNA | 分子名称: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA (5'-D(*DGP*DCP*DCP*DTP*DCP*DAP*DAP*DGP*DTP*DTP*DAP*DAP*DCP*DTP*DTP*DGP*DAP*DGP*DGP*DC)-3'), FE2/S2 (INORGANIC) CLUSTER, ... | 著者 | Watanabe, S, Kita, A, Kobayashi, K, Miki, K. | 登録日 | 2008-02-05 | 公開日 | 2008-03-25 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA Proc.Natl.Acad.Sci.Usa, 105, 2008
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3AZC
| Crystal structure of the soluble part of cytochrome b6f complex iron-sulfur subunit from Thermosynechococcus elongatus BP-1 | 分子名称: | Cytochrome b6-f complex iron-sulfur subunit, FE2/S2 (INORGANIC) CLUSTER | 著者 | Veit, S, Takeda, K, Tsunoyama, Y, Roegner, M, Miki, K. | 登録日 | 2011-05-23 | 公開日 | 2012-05-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a thermophilic cyanobacterial b(6)f-type Rieske protein Acta Crystallogr.,Sect.D, 68, 2012
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3A12
| Crystal structure of Type III Rubisco complexed with 2-CABP | 分子名称: | 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase | 著者 | Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. | 登録日 | 2009-03-25 | 公開日 | 2010-04-07 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010
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2ZDI
| Crystal structure of Prefoldin from Pyrococcus horikoshii OT3 | 分子名称: | Prefoldin subunit alpha, Prefoldin subunit beta, SULFATE ION | 著者 | Kida, H, Miki, K. | 登録日 | 2007-11-23 | 公開日 | 2008-02-05 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure and molecular dynamics simulation of archaeal prefoldin: the molecular mechanism for binding and recognition of nonnative substrate proteins J.Mol.Biol., 376, 2008
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3W5H
| Ultra-high resolution structure of NADH-cytochrome b5 reductase | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADH-cytochrome b5 reductase 3 | 著者 | Takeda, K, Ohno, H, Kosugi, M, Takaba, K, Miki, K. | 登録日 | 2013-01-30 | 公開日 | 2013-07-17 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (0.78 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3W2I
| Crystal structure of re-oxidized form (60 min) of NADH-cytochrome b5 reductase from pig liver | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K. | 登録日 | 2012-11-28 | 公開日 | 2013-07-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3W2E
| Crystal structure of oxidation intermediate (20 min) of NADH-cytochrome b5 reductase from pig liver | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K. | 登録日 | 2012-11-28 | 公開日 | 2013-07-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3W2G
| Crystal structure of fully reduced form of NADH-cytochrome b5 reductase from pig liver | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K. | 登録日 | 2012-11-28 | 公開日 | 2013-07-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3W2F
| Crystal structure of oxidation intermediate (10 min) of NADH-cytochrome b5 reductase from pig liver | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K. | 登録日 | 2012-11-28 | 公開日 | 2013-07-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.76 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3W2H
| Crystal structure of oxidation intermediate (1min) of NADH-cytochrome b5 reductase from pig liver | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K. | 登録日 | 2012-11-28 | 公開日 | 2013-07-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.752 Å) | 主引用文献 | Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer J.Mol.Biol., 425, 2013
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3VQL
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3W07
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3W1Z
| Heat shock protein 16.0 from Schizosaccharomyces pombe | 分子名称: | Heat shock protein 16 | 著者 | Hanazono, Y, Takeda, K, Akiyama, N, Aikawa, Y, Miki, K. | 登録日 | 2012-11-26 | 公開日 | 2013-03-13 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.401 Å) | 主引用文献 | Nonequivalence Observed for the 16-Meric Structure of a Small Heat Shock Protein, SpHsp16.0, from Schizosaccharomyces pombe Structure, 21, 2013
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3VQK
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3VX3
| Crystal structure of [NiFe] hydrogenase maturation protein HypB from Thermococcus kodakarensis KOD1 | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ATPase involved in chromosome partitioning, ... | 著者 | Sasaki, D, Watanabe, S, Miki, K. | 登録日 | 2012-09-09 | 公開日 | 2013-02-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Identification and Structure of a Novel Archaeal HypB for [NiFe] Hydrogenase Maturation J.Mol.Biol., 425, 2013
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3VQM
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3WCU
| The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: Deoxygenated form | 分子名称: | A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ... | 著者 | Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K. | 登録日 | 2013-06-01 | 公開日 | 2014-06-04 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins Acta Crystallogr.,Sect.D, 70, 2014
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3WCV
| The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: CA bound form | 分子名称: | A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ... | 著者 | Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K. | 登録日 | 2013-06-01 | 公開日 | 2014-06-04 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins Acta Crystallogr.,Sect.D, 70, 2014
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3WHB
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3WJU
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3WJT
| Crystal structure of the L68D variant of mLolB | 分子名称: | CHLORIDE ION, Outer-membrane lipoprotein LolB, SULFATE ION | 著者 | Takeda, K, Tokuda, H, Miki, K. | 登録日 | 2013-10-16 | 公開日 | 2014-03-05 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Roles of the Protruding Loop of Factor B Essential for the Localization of Lipoproteins (LolB) in the Anchoring of Bacterial Triacylated Proteins to the Outer Membran J.Biol.Chem., 289, 2014
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