Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1KIM
DownloadVisualize
BU of 1kim by Molmil
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH DEOXYTHYMIDINE
分子名称: SULFATE ION, THYMIDINE, THYMIDINE KINASE
著者Champness, J.N, Bennett, M.S, Wien, F, Brown, D.G, Visse, R, Sandhu, G, Davies, A, Rizkallah, P.J, Melitz, C, Summers, W.C, Sanderson, M.R.
登録日1997-11-12
公開日1998-05-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998
5UJ2
DownloadVisualize
BU of 5uj2 by Molmil
Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU
分子名称: (1S)-1-(4-aminoimidazo[2,1-f][1,2,4]triazin-7-yl)-1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-2-methyl-D-ribitol, CHLORIDE ION, Genome polyprotein, ...
著者Edwards, T.E, Fox III, D, Appleby, T.C, Murakami, E, Rey, A, McGrath, M.E.
登録日2017-01-16
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of a 2'-fluoro-2'-C-methyl C-nucleotide HCV polymerase inhibitor and a phosphoramidate prodrug with favorable properties.
Bioorg. Med. Chem. Lett., 27, 2017
1KS4
DownloadVisualize
BU of 1ks4 by Molmil
The structure of Aspergillus niger endoglucanase-palladium complex
分子名称: Endoglucanase A, PALLADIUM ION
著者Khademi, S, Zhang, D, Swanson, S.M, Wartenberg, A, Witte, C, Meyer, E.F.
登録日2002-01-10
公開日2003-01-21
最終更新日2017-02-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Determination of the structure of an endoglucanase from Aspergillus niger and its mode of inhibition by palladium chloride.
Acta Crystallogr.,Sect.D, 58, 2002
1PVW
DownloadVisualize
BU of 1pvw by Molmil
3,4-dihydroxy-2-butanone 4-phosphate synthase from M. jannaschii
分子名称: 3,4-dihydroxy-2-butanone 4-phosphate synthase, CALCIUM ION, PHOSPHATE ION, ...
著者Steinbacher, S, Schiffmann, S, Richter, G, Huber, R, Bacher, A, Fischer, M.
登録日2003-06-29
公開日2003-11-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of 3,4-Dihydroxy-2-butanone 4-Phosphate Synthase from Methanococcus jannaschii in Complex with Divalent Metal Ions and the Substrate Ribulose 5-Phosphate: IMPLICATIONS FOR THE CATALYTIC MECHANISM
J.Biol.Chem., 278, 2003
1PWF
DownloadVisualize
BU of 1pwf by Molmil
One Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNA
分子名称: 5'-D(*GP*CP*GP*TP*AP*(2MU)P*(FA2)P*CP*GP*C)-3', SPERMINE
著者Pallan, P.S, Wilds, C.J, Wawrzak, Z, Krishnamurthy, R, Eschenmoser, A, Egli, M.
登録日2003-07-01
公開日2004-07-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Why does TNA cross-pair more strongly with RNA than with DNA? an answer from X-ray analysis.
ANGEW.CHEM.INT.ED.ENGL., 42, 2003
8ECE
DownloadVisualize
BU of 8ece by Molmil
E. coli L-asparaginase II mutant (V27T) in complex with L-Glu
分子名称: 1,2-ETHANEDIOL, GLUTAMIC ACID, L-asparaginase 2
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2022-09-01
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The E. coli L-asparaginase V27T mutant: structural and functional characterization and comparison with theoretical predictions.
Febs Lett., 596, 2022
1G48
DownloadVisualize
BU of 1g48 by Molmil
CARBONIC ANHYDRASE II (F131V) COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(2,6-DIFLUOROPHENYL)METHYL]-BENZAMIDE
分子名称: CARBONIC ANHYDRASE II, MERCURY (II) ION, N-(2,6-DIFLUORO-BENZYL)-4-SULFAMOYL-BENZAMIDE, ...
著者Kim, C.-Y, Chang, J.S, Doyon, J.B, Baird Jr, T.T, Fierke, C.A, Jain, A, Christianson, D.W.
登録日2000-10-26
公開日2000-11-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Contribution of Flourine to Protein-ligand Affinity in the Binding of Flouroaromatic Inhibitors to Carbonic Anhydrase II
J.Am.Chem.Soc., 122, 2000
1G4I
DownloadVisualize
BU of 1g4i by Molmil
Crystal structure of the bovine pancreatic phospholipase A2 at 0.97A
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
著者Steiner, R.A, Rozeboom, H.J, de Vries, A, Kalk, K.H, Murshudov, G.N, Wilson, K.S, Dijkstra, B.W.
登録日2000-10-27
公開日2001-04-04
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献X-ray structure of bovine pancreatic phospholipase A2 at atomic resolution.
Acta Crystallogr.,Sect.D, 57, 2001
8ECD
DownloadVisualize
BU of 8ecd by Molmil
E. coli L-asparaginase II mutant (V27T) in complex with L-Asp
分子名称: 1,2-ETHANEDIOL, ASPARTIC ACID, CITRIC ACID, ...
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2022-09-01
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The E. coli L-asparaginase V27T mutant: structural and functional characterization and comparison with theoretical predictions.
Febs Lett., 596, 2022
1G7S
DownloadVisualize
BU of 1g7s by Molmil
X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, TRANSLATION INITIATION FACTOR IF2/EIF5B
著者Roll-Mecak, A, Cao, C, Dever, T.E, Burley, S.K.
登録日2000-11-14
公開日2000-12-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding.
Cell(Cambridge,Mass.), 103, 2000
1G8P
DownloadVisualize
BU of 1g8p by Molmil
CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE
分子名称: MAGNESIUM-CHELATASE 38 KDA SUBUNIT
著者Fodje, M.N, Hansson, A, Hansson, M, Olsen, J.G, Gough, S, Willows, R.D, Al-Karadaghi, S.
登録日2000-11-20
公開日2001-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Interplay between an AAA module and an integrin I domain may regulate the function of magnesium chelatase.
J.Mol.Biol., 311, 2001
1G95
DownloadVisualize
BU of 1g95 by Molmil
CRYSTAL STRUCTURE OF S.PNEUMONIAE GLMU, APO FORM
分子名称: N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE
著者Kostrewa, D, D'Arcy, A, Kamber, M.
登録日2000-11-22
公開日2001-05-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structures of Streptococcus pneumoniae N-acetylglucosamine-1-phosphate uridyltransferase, GlmU, in apo form at 2.33 A resolution and in complex with UDP-N-acetylglucosamine and Mg(2+) at 1.96 A resolution.
J.Mol.Biol., 305, 2001
1NAA
DownloadVisualize
BU of 1naa by Molmil
Cellobiose Dehydrogenase Flavoprotein Fragment in Complex with Cellobionolactam
分子名称: (2R,3R,4R,5R)-4,5-dihydroxy-2-(hydroxymethyl)-6-oxopiperidin-3-yl beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hallberg, B.M, Henriksson, G, Pettersson, G, Vasella, A, Divne, C.
登録日2002-11-27
公開日2003-01-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism of the reductive half-reaction in cellobiose dehydrogenase
J.BIOL.CHEM., 278, 2003
1GE9
DownloadVisualize
BU of 1ge9 by Molmil
SOLUTION STRUCTURE OF THE RIBOSOME RECYCLING FACTOR
分子名称: RIBOSOME RECYCLING FACTOR
著者Yoshida, T, Uchiyama, S, Nakano, H, Kashimori, H, Kijima, H, Ohshima, T, Saihara, Y, Ishino, T, Shimahara, T, Yoshida, T, Yokose, K, Ohkubo, T, Kaji, A, Kobayashi, Y.
登録日2000-10-19
公開日2001-05-16
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the ribosome recycling factor from Aquifex aeolicus.
Biochemistry, 40, 2001
1G1K
DownloadVisualize
BU of 1g1k by Molmil
COHESIN MODULE FROM THE CELLULOSOME OF CLOSTRIDIUM CELLULOLYTICUM
分子名称: SCAFFOLDING PROTEIN
著者Spinelli, S, Fierobe, H.-P, Belaich, A, Belaich, J.-P, Henrissat, B, Cambillau, C.
登録日2000-10-12
公開日2000-11-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a cohesin module from Clostridium cellulolyticum: implications for dockerin recognition.
J.Mol.Biol., 304, 2000
1G1Y
DownloadVisualize
BU of 1g1y by Molmil
CRYSTAL STRUCTURE OF ALPHA-AMYLASE II (TVAII) FROM THERMOACTINOMYCES VULGARIS R-47 AND BETA-CYCLODEXTRIN COMPLEX
分子名称: ALPHA-AMYLASE II, Cycloheptakis-(1-4)-(alpha-D-glucopyranose)
著者Kondo, S, Ohtaki, A, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2000-10-16
公開日2001-03-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Studies on the hydrolyzing mechanism for cyclodextrins of Thermoactinomyces vulgaris R-47 alpha-amylase 2 (TVAII). X-ray structure of the mutant E354A complexed with beta-cyclodextrin, and kinetic analyses on cyclodextrins.
J.Biochem.(Tokyo), 129, 2001
1FW9
DownloadVisualize
BU of 1fw9 by Molmil
CHORISMATE LYASE WITH BOUND PRODUCT
分子名称: CHORISMATE LYASE, P-HYDROXYBENZOIC ACID
著者Gallagher, D.T, Mayhew, M, Holden, M, Vilker, V, Howard, A.
登録日2000-09-22
公開日2001-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The crystal structure of chorismate lyase shows a new fold and a tightly retained product.
Proteins, 44, 2001
1G43
DownloadVisualize
BU of 1g43 by Molmil
CRYSTAL STRUCTURE OF A FAMILY IIIA CBD FROM CLOSTRIDIUM CELLULOLYTICUM
分子名称: CALCIUM ION, SCAFFOLDING PROTEIN, ZINC ION
著者Shimon, L.J.W, Pages, S, Belaich, A, Belaich, J.-P, Bayer, E.A, Lamed, R, Shoham, Y, Frolow, F.
登録日2000-10-26
公開日2000-12-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a family IIIa scaffoldin CBD from the cellulosome of Clostridium cellulolyticum at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
1G54
DownloadVisualize
BU of 1g54 by Molmil
CARBONIC ANHYDRASE II COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL]-BENZAMIDE
分子名称: CARBONIC ANHYDRASE II, MERCURY (II) ION, N-(2,3,4,5,6-PENTAFLUORO-BENZYL)-4-SULFAMOYL-BENZAMIDE, ...
著者Kim, C.-Y, Chang, J.S, Doyon, J.B, Baird Jr, T.T, Fierke, C.A, Jain, A, Christianson, D.W.
登録日2000-10-30
公開日2000-11-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Contribution of Flourine to Protein-ligand Affinity in the Binding of Flouroaromatic Inhibitors to Carbonic Anhydrase II
J.Am.Chem.Soc., 122, 2000
1G7R
DownloadVisualize
BU of 1g7r by Molmil
X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B
分子名称: TRANSLATION INITIATION FACTOR IF2/EIF5B
著者Roll-Mecak, A, Cao, C, Dever, T.E, Burley, S.K.
登録日2000-11-14
公開日2000-12-06
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding.
Cell(Cambridge,Mass.), 103, 2000
8EAL
DownloadVisualize
BU of 8eal by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and DNA. Class 1. Merged particles from datasets with 3 different DNA entities
分子名称: DNA, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
1G8C
DownloadVisualize
BU of 1g8c by Molmil
STRUCTURE OF THE BOVINE ANTIMICROBIAL PEPTIDE INDOLICIDIN BOUND TO SODIUM DODECYL SULFATE MICELLES
分子名称: INDOLICIDIN
著者Rozek, A, Friedrich, C.L, Hancock, R.E.
登録日2000-11-16
公開日2000-11-29
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure of the bovine antimicrobial peptide indolicidin bound to dodecylphosphocholine and sodium dodecyl sulfate micelles.
Biochemistry, 39, 2000
8EAI
DownloadVisualize
BU of 8eai by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and 16-mer oligo-dT. Class 2
分子名称: 16-mer oligo-dT, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
1NHB
DownloadVisualize
BU of 1nhb by Molmil
Specificity of ligand binding in a buried non-polar cavity of t4 lysozyme: linkage of dynamics and structural plasticity
分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PHENYLETHANE, ...
著者Morton, A, Matthews, B.W.
登録日1995-02-24
公開日1995-07-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Specificity of ligand binding in a buried nonpolar cavity of T4 lysozyme: linkage of dynamics and structural plasticity.
Biochemistry, 34, 1995
1G90
DownloadVisualize
BU of 1g90 by Molmil
NMR Solution Structure of Outer Membrane Protein A Transmembrane Domain: 10 conformers
分子名称: OUTER MEMBRANE PROTEIN A
著者Arora, A, Abildgaard, F, Bushweller, J.H, Tamm, L.K.
登録日2000-11-21
公開日2001-04-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of outer membrane protein A transmembrane domain by NMR spectroscopy
Nat.Struct.Biol., 8, 2001

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon