Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5JFP
DownloadVisualize
BU of 5jfp by Molmil
HIV-1 wild Type protease with GRL-097-13A (a Adamantane P1-Ligand with bis-THF in P2 and isobutylamine in P1')
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2016-04-19
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5JFU
DownloadVisualize
BU of 5jfu by Molmil
HIV-1 wild Type protease with GRL-007-14A (a Adamantane P1-Ligand with bis-THF in P2 and benzylamine in P1')
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-4-{benzyl[(4-methoxyphenyl)sulfonyl]amino}-3-hydroxy-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2016-04-19
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5JG1
DownloadVisualize
BU of 5jg1 by Molmil
HIV-1 wild Type protease with GRL-031-14A (a Adamantane P1-Ligand with tetrahydropyrano-tetrahydrofuran in P2 and isobutylamine in P1')
分子名称: (3R,3aS,7aR)-hexahydro-4H-furo[2,3-b]pyran-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, GLYCEROL, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2016-04-19
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
8XO3
DownloadVisualize
BU of 8xo3 by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-47) (P321 space group)
分子名称: CALCIUM ION, Fusion glycoprotein F1
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.104 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO2
DownloadVisualize
BU of 8xo2 by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (P21212 space group)
分子名称: Fusion glycoprotein F1, MAGNESIUM ION
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.306 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO7
DownloadVisualize
BU of 8xo7 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P2 space group)
分子名称: Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GE
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (2.165 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XNE
DownloadVisualize
BU of 8xne by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (H32 space group)
分子名称: Fusion glycoprotein F1, MAGNESIUM ION
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-29
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.155 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO5
DownloadVisualize
BU of 8xo5 by Molmil
Crystal structure of measles virus fusion inhibitor MEK28 complexed with F protein HR1 (HR1-40) (H3 space group)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Fusion glycoprotein F1, Measles virus fusion inhibitor MEK28
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.205 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO4
DownloadVisualize
BU of 8xo4 by Molmil
Crystal structure of measles virus fusion inhibitor M1EK complexed with F protein HR1 (HR1-42) (P21 space group)
分子名称: Fusion glycoprotein F1, Measles virus fusion inhibitor M1EK
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (2.362 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO6
DownloadVisualize
BU of 8xo6 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P21212 space group)
分子名称: ACETATE ION, Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GE, ...
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.457 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO8
DownloadVisualize
BU of 8xo8 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GT complexed with F protein HR1 (HR1-42) (P21 space group)
分子名称: Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GT
著者Oishi, S, Takahara, A, Nakatsu, T.
登録日2023-12-31
公開日2025-01-01
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.846 Å)
主引用文献Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
5BS4
DownloadVisualize
BU of 5bs4 by Molmil
HIV-1 wild Type protease with GRL-047-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, 4-amino sulfonamide derivative)
分子名称: (3R,3aS,4R,6aR)-4-(methylamino)hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2015-06-01
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies.
J.Med.Chem., 58, 2015
5BRY
DownloadVisualize
BU of 5bry by Molmil
HIV-1 wild Type protease with GRL-011-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, sulfonamide isostere derivate)
分子名称: (3R,3aS,4R,6aR)-4-(methylamino)hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, CHLORIDE ION, Protease, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2015-06-01
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies.
J.Med.Chem., 58, 2015
1KA9
DownloadVisualize
BU of 1ka9 by Molmil
Imidazole Glycerol Phosphate Synthase
分子名称: imidazole glycerol phosphate synthase
著者Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-01
公開日2002-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1KZK
DownloadVisualize
BU of 1kzk by Molmil
JE-2147-HIV Protease Complex
分子名称: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
登録日2002-02-06
公開日2002-04-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure
Biochemistry, 41, 2002
1IYE
DownloadVisualize
BU of 1iye by Molmil
CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
分子名称: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
著者Hirotsu, K, Goto, M.
登録日2002-08-07
公開日2003-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme.
Biochemistry, 42, 2003
1IYD
DownloadVisualize
BU of 1iyd by Molmil
CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
分子名称: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, GLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Hirotsu, K, Goto, M.
登録日2002-08-07
公開日2003-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme.
Biochemistry, 42, 2003
5Z5E
DownloadVisualize
BU of 5z5e by Molmil
Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
分子名称: GLYCEROL, NEQ417, SULFATE ION
著者Noguchi, H, Park, S.Y, Tamura, K.
登録日2018-01-18
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation.
Biochem.Biophys.Res.Commun., 511, 2019
3A9Z
DownloadVisualize
BU of 3a9z by Molmil
Crystal structure of ras selenocysteine lyase in complex with selenopropionate
分子名称: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Omi, R, Hirotsu, K.
登録日2009-11-09
公開日2010-03-16
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A2B
DownloadVisualize
BU of 3a2b by Molmil
Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
分子名称: PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
著者Okamoto, A, Hoseki, J.
登録日2009-05-09
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum
J.Biochem., 146, 2009
3A9Y
DownloadVisualize
BU of 3a9y by Molmil
Crystal structure of rat selenocysteine lyase in complex with L-cysteine
分子名称: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
著者Omi, R, Hirotsu, K.
登録日2009-11-09
公開日2010-03-16
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
2Z5E
DownloadVisualize
BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
分子名称: Proteasome Assembling Chaperone 3
著者Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
登録日2007-07-06
公開日2008-02-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
3A9X
DownloadVisualize
BU of 3a9x by Molmil
Crystal structure of rat selenocysteine lyase
分子名称: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
著者Omi, R, Hirotsu, K.
登録日2009-11-08
公開日2010-03-16
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
7DJI
DownloadVisualize
BU of 7dji by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
著者Ihara, M, Matsuda, K.
登録日2020-11-20
公開日2021-11-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors.
Mol.Pharmacol., 2023
7F8K
DownloadVisualize
BU of 7f8k by Molmil
Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T.
登録日2021-07-02
公開日2021-09-08
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallogr.,Sect.F, 77, 2021

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon