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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-L-glutamic acid
分子名称:	Aspartate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
著者	Goto, M.
登録日	2005-04-21
公開日	2005-06-14
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step. Biochemistry, 44, 2005

1X29

Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-2-methyl-L-glutamic acid
分子名称:	Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-2-METHYL-L-GLUTAMIC ACID
著者	Goto, M.
登録日	2005-04-21
公開日	2005-06-14
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step. Biochemistry, 44, 2005

1KA9

Imidazole Glycerol Phosphate Synthase
分子名称:	imidazole glycerol phosphate synthase
著者	Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2001-11-01
公開日	2002-12-04
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling. J.Biochem., 132, 2002

5Z5E

Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
分子名称:	GLYCEROL, NEQ417, SULFATE ION
著者	Noguchi, H, Park, S.Y, Tamura, K.
登録日	2018-01-18
公開日	2019-01-30
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.098 Å)
主引用文献	Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation. Biochem.Biophys.Res.Commun., 511, 2019

1UIM

Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
分子名称:	PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
著者	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-07-17
公開日	2003-11-18
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism. J.BIOL.CHEM., 278, 2003

1UIN

Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
分子名称:	PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
著者	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-07-17
公開日	2003-11-18
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism. J.BIOL.CHEM., 278, 2003

1V2F

Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
分子名称:	Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-10-15
公開日	2004-07-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1V7C

Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
分子名称:	(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
著者	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-12-16
公開日	2003-12-30
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism. J.Biol.Chem., 278, 2003

1V2E

Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with a-keto-g-methylthiobutyrate
分子名称:	4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
著者	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-10-15
公開日	2004-07-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.6 Å)
主引用文献	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1VB3

Crystal Structure of Threonine Synthase from Escherichia coli
分子名称:	2-OXO-5-PHOSPHONOPENTANOIC ACID, SULFATE ION, Threonine synthase
著者	Omi, R.
登録日	2004-02-21
公開日	2005-06-21
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Crystal Structure of Threonine Synthase from Escherichia coli To be Published

1V2D

Crystal Structure of T.th HB8 Glutamine Aminotransferase
分子名称:	Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
著者	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-10-15
公開日	2004-07-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1IYD

CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
分子名称:	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, GLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者	Hirotsu, K, Goto, M.
登録日	2002-08-07
公開日	2003-05-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme. Biochemistry, 42, 2003

1IYE

CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
分子名称:	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
著者	Hirotsu, K, Goto, M.
登録日	2002-08-07
公開日	2003-05-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.82 Å)
主引用文献	Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme. Biochemistry, 42, 2003

1KZK

JE-2147-HIV Protease Complex
分子名称:	(4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者	Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
登録日	2002-02-06
公開日	2002-04-03
最終更新日	2023-08-16
実験手法	X-RAY DIFFRACTION (1.09 Å)
主引用文献	Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure Biochemistry, 41, 2002

3A9Z

Crystal structure of ras selenocysteine lyase in complex with selenopropionate
分子名称:	3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者	Omi, R, Hirotsu, K.
登録日	2009-11-09
公開日	2010-03-16
最終更新日	2013-10-30
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

3A9X

Crystal structure of rat selenocysteine lyase
分子名称:	PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
著者	Omi, R, Hirotsu, K.
登録日	2009-11-08
公開日	2010-03-16
最終更新日	2013-10-30
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

2Z5E

Crystal Structure of Proteasome Assembling Chaperone 3
分子名称:	Proteasome Assembling Chaperone 3
著者	Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
登録日	2007-07-06
公開日	2008-02-19
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes Nat.Struct.Mol.Biol., 15, 2008

3A2B

Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
分子名称:	PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
著者	Okamoto, A, Hoseki, J.
登録日	2009-05-09
公開日	2009-07-14
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum J.Biochem., 146, 2009

3A9Y

Crystal structure of rat selenocysteine lyase in complex with L-cysteine
分子名称:	CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
著者	Omi, R, Hirotsu, K.
登録日	2009-11-09
公開日	2010-03-16
最終更新日	2013-10-30
実験手法	X-RAY DIFFRACTION (1.85 Å)
主引用文献	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

7WIS

Catalytic intermediate structure of N381A mutant of copper amine oxidase from Arthrobacter globiformis
分子名称:	COPPER (II) ION, GLYCEROL, PHENYLACETALDEHYDE, ...
著者	Murakawa, T, Okajima, T.
登録日	2022-01-04
公開日	2022-11-16
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase. Chem Sci, 13, 2022

7WIR

Holo form of N381A mutant of copper amine oxidase from Arthrobacter globiformis
分子名称:	COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase
著者	Murakawa, T, Okajima, T.
登録日	2022-01-04
公開日	2022-11-16
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase. Chem Sci, 13, 2022

1J1E

Crystal structure of the 52kDa domain of human cardiac troponin in the Ca2+ saturated form
分子名称:	CALCIUM ION, Troponin C, Troponin I, ...
著者	Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
登録日	2002-12-03
公開日	2003-07-15
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (3.3 Å)
主引用文献	Structure of the core domain of human cardiac troponin in the Ca2+-saturated form Nature, 424, 2003

1J1D

Crystal structure of the 46kDa domain of human cardiac troponin in the Ca2+ saturated form
分子名称:	CALCIUM ION, Troponin C, Troponin I, ...
著者	Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
登録日	2002-12-03
公開日	2003-07-15
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.61 Å)
主引用文献	Structure of the core domain of human cardiac troponin in the Ca2+-saturated form Nature, 424, 2003

7DJI

Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
著者	Ihara, M, Matsuda, K.
登録日	2020-11-20
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors. Mol.Pharmacol., 2023

7F8K

Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
分子名称:	COPPER (II) ION, Phenylethylamine oxidase
著者	Murakawa, T, Okajima, T.
登録日	2021-07-02
公開日	2021-09-08
最終更新日	2021-10-13
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase Acta Crystallogr.,Sect.F, 77, 2021

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