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2ZA3
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Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with uridine 5'-monophosphate from P.falciparum
分子名称: Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
著者Tokuoka, K, Inoue, T.
登録日2007-09-26
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase
J.Biochem.(Tokyo), 143, 2008
2ZA1
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Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with orotidine 5'-monophosphate from P.falciparum
分子名称: OROTIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Tokuoka, K, Inoue, T.
登録日2007-09-26
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase
J.BIOCHEM.(TOKYO), 143, 2008
2CW7
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Crystal structure of intein homing endonuclease II
分子名称: Endonuclease PI-PkoII, SULFATE ION
著者Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
登録日2005-06-17
公開日2006-04-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006
2CZR
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Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA
分子名称: GLYCEROL, TBP-interacting protein, ZINC ION
著者Yamamoto, T, Matsuda, T, Inoue, T, Matsumura, H, Morikawa, M, Kanaya, S, Kai, Y.
登録日2005-07-15
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA
Protein Sci., 15, 2006
2CW8
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Crystal structure of intein homing endonuclease II
分子名称: Endonuclease PI-PkoII, GLYCEROL, SULFATE ION
著者Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
登録日2005-06-17
公開日2006-04-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006
2ZVI
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Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
著者Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H.
登録日2008-11-07
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Acta Crystallogr.,Sect.D, 65, 2009
3WJE
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Crystal structure of mutant nitrobindin M75W/H76L/Q96C/M148L/H158L (NB6) from Arabidopsis thaliana
分子名称: UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WVM
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The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-25
公開日2015-01-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
3WJF
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Crystal structure of mutant nitrobindin M75L/H76L/Q96C/V128W/M148L/H158L (NB9) from Arabidopsis thaliana
分子名称: UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WFU
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Crystal structure of horse heart myoglobin reconstituted with cobalt(I) tetradehydrocorrin
分子名称: (1R,19R) cobalt tetradehydrocorrin, (1S,19S) cobalt tetradehydrocorrin, Myoglobin, ...
著者Mizohata, E, Morita, Y, Oohora, K, Hirata, K, Ohbayashi, J, Inoue, T, Hisaeda, Y, Hayashi, T.
登録日2013-07-23
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Co(II)/Co(I) reduction-induced axial histidine-flipping in myoglobin reconstituted with a cobalt tetradehydrocorrin as a methionine synthase model.
Chem.Commun.(Camb.), 50, 2014
3WJG
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Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148W/H158L (NB10) from Arabidopsis thaliana
分子名称: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3X2S
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BU of 3x2s by Molmil
Crystal structure of pyrene-conjugated adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
著者Fujii, A, Sekiguchi, Y, Matsumura, H, Inoue, T, Chung, W.-S, Hirota, S, Matsuo, T.
登録日2014-12-31
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Excimer Emission Properties on Pyrene-Labeled Protein Surface: Correlation between Emission Spectra, Ring Stacking Modes, and Flexibilities of Pyrene Probes.
Bioconjug.Chem., 26, 2015
1IR1
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Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-08-31
公開日2002-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
1IR2
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Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, Large subunit of Rubisco, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-09-03
公開日2002-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
1IWA
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RUBISCO FROM GALDIERIA PARTITA
分子名称: SULFATE ION, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
著者Okano, Y, Mizohata, E, Xie, Y, Matsumura, H, Sugawara, H, Inoue, T, Yokota, A, Kai, Y.
登録日2002-04-30
公開日2003-04-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献X-Ray Structure of Galdieria Rubisco Complexed with one sulfate ion per active site
FEBS LETT., 527, 2002
3WO8
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Crystal structure of the beta-N-acetylglucosaminidase from Thermotoga maritima
分子名称: Beta-N-acetylglucosaminidase
著者Mine, S, Kado, Y, Watanabe, M, Inoue, T, Ishikawa, K.
登録日2013-12-20
公開日2014-12-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献The structure of hyperthermophilic beta-N-acetylglucosaminidase reveals a novel dimer architecture associated with the active site.
Febs J., 281, 2014
3APG
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Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus
分子名称: Beta-glucosidase, GLYCEROL
著者Kado, Y, Inoue, T, Ishikawa, K.
登録日2010-10-15
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus
TO BE PUBLISHED
3ATZ
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Crystal structure of TcOYE with pHBA
分子名称: FLAVIN MONONUCLEOTIDE, P-HYDROXYBENZALDEHYDE, Prostaglandin F2a synthase
著者Okamoto, N, Yamaguchi, K, Mizohata, E, Tokuoka, K, Uchiyama, N, Sugiyama, S, Matsumura, H, Inaka, K, Urade, Y, Inoue, T.
登録日2011-01-26
公開日2012-02-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural insight into the stereoselective production of PGF2(alpha) by Old Yellow Enzyme from Trypanosoma cruzi
J.Biochem., 150, 2011
3AG5
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Crystal Structure of Pantothenate Synthetase from Staphylococcus aureus
分子名称: Pantothenate synthetase
著者Satoh, A, Konishi, S, Tamura, H, Stickland, H.G, Whitney, H.M, Smith, A.G, Matsumura, H, Inoue, T.
登録日2010-03-19
公開日2010-07-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate-induced closing of the active site revealed by the crystal structure of pantothenate synthetase from Staphylococcus aureus.
Biochemistry, 49, 2010
3ATY
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Crystal structure of TcOYE
分子名称: FLAVIN MONONUCLEOTIDE, Prostaglandin F2a synthase
著者Yamaguchi, K, Okamoto, N, Tokuoka, K, Sugiyama, S, Uchiyama, N, Matsumura, H, Inaka, K, Urade, Y, Inoue, T.
登録日2011-01-26
公開日2011-05-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insight into the stereoselective production of PGF2(alpha) by Old Yellow Enzyme from Trypanosoma cruzi
J.Biochem., 150, 2011
2YVK
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BU of 2yvk by Molmil
Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis
分子名称: 5-S-METHYL-1-O-PHOSPHONO-5-THIO-D-RIBULOSE, Methylthioribose-1-phosphate isomerase
著者Tamura, H, Inoue, T, Kai, Y, Matsumura, H.
登録日2007-04-13
公開日2008-01-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism
Protein Sci., 17, 2008
2YRF
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Crystal structure of 5-methylthioribose 1-phosphate isomerase from Bacillus subtilis complexed with sulfate ion
分子名称: Methylthioribose-1-phosphate isomerase, SULFATE ION
著者Tamura, H, Inoue, T, Kai, Y, Matsumura, H.
登録日2007-04-02
公開日2008-01-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism
Protein Sci., 17, 2008
3AG6
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Crystal Structure of Pantothenate Synthetase from Staphylococcus aureus in complex with pantoyl adenylate
分子名称: ACETIC ACID, PANTOYL ADENYLATE, Pantothenate synthetase, ...
著者Satoh, A, Konishi, S, Tamura, H, Stickland, H.G, Whitney, H.M, Smith, A.G, Matsumura, H, Inoue, T.
登録日2010-03-19
公開日2010-07-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate-induced closing of the active site revealed by the crystal structure of pantothenate synthetase from Staphylococcus aureus.
Biochemistry, 49, 2010
7DF2
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Crystal structure of a C2 domain protein from Ramazzottius varieornatus
分子名称: C2 domain protein, CALCIUM ION, beta-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Fukuda, Y, Inoue, T.
登録日2020-11-06
公開日2020-12-09
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into a C2 domain protein specifically found in tardigrades.
Protein Sci., 30, 2021
3WKQ
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Copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with formate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, COPPER (II) ION, ...
著者Fukuda, Y, Inoue, T.
登録日2013-10-29
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with formate
to be published

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