Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2EXH
DownloadVisualize
BU of 2exh by Molmil
Structure of the family43 beta-Xylosidase from geobacillus stearothermophilus
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
著者Brux, C, Niefind, K, Shallom-Shezifi, D, Yuval, S, Schomburg, D.
登録日2005-11-08
公開日2006-04-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The Structure of an Inverting GH43 beta-Xylosidase from Geobacillus stearothermophilus with its Substrate Reveals the Role of the Three Catalytic Residues.
J.Mol.Biol., 359, 2006
2EZ2
DownloadVisualize
BU of 2ez2 by Molmil
Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0
分子名称: PHOSPHATE ION, POTASSIUM ION, Tyrosine phenol-lyase
著者Milic, D, Matkovic-Calogovic, D, Demidkina, T.V, Antson, A.A.
登録日2005-11-10
公開日2006-07-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structures of apo- and holo-tyrosine phenol-lyase reveal a catalytically critical closed conformation and suggest a mechanism for activation by K+ ions
Biochemistry, 45, 2006
2CIM
DownloadVisualize
BU of 2cim by Molmil
Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase
分子名称: CHLORIDE ION, PLATINUM (II) ION, SERYL-TRNA SYNTHETASE, ...
著者Bilokapic, S, Maier, T, Ahel, D, Gruic-Sovulj, I, Soll, D, Weygand-Durasevic, I, Ban, N.
登録日2006-03-24
公開日2006-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure of the Unusual Seryl-tRNA Synthetase Reveals a Distinct Zinc-Dependent Mode of Substrate Recognition
Embo J., 25, 2006
2A5U
DownloadVisualize
BU of 2a5u by Molmil
Crystal Structure of human PI3Kgamma complexed with AS605240
分子名称: (5E)-5-(QUINOXALIN-6-YLMETHYLENE)-1,3-THIAZOLIDINE-2,4-DIONE, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit, gamma isoform
著者Camps, M, Ruckle, T, Ji, H, Ardissone, V, Rintelen, F, Shaw, J, Ferrandi, C, Chabert, C, Gillieron, C, Francon, B, Martin, T, Gretener, D, Perrin, D, Leroy, D, Vitte, P.-A, Hirsch, E, Wymann, M.P, Cirillo, R, Schwarz, M.K, Rommel, C.
登録日2005-07-01
公開日2005-09-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Blockade of PI3Kgamma suppresses joint inflammation and damage in mouse models of rheumatoid arthritis
NAT.MED. (N.Y.), 11, 2005
2FOB
DownloadVisualize
BU of 2fob by Molmil
Structure of porcine pancreatic elastase in 40/50/10 cyclohexane
分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOF
DownloadVisualize
BU of 2fof by Molmil
Structure of porcine pancreatic elastase in 80% isopropanol
分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOA
DownloadVisualize
BU of 2foa by Molmil
Structure of porcine pancreatic elastase in 40/50/10 % benzene
分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FO9
DownloadVisualize
BU of 2fo9 by Molmil
Structure of porcine pancreatic elastase in 95% acetone
分子名称: ACETONE, CALCIUM ION, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOH
DownloadVisualize
BU of 2foh by Molmil
Structure of porcine pancreatic elastase in 40% trifluoroethanol
分子名称: CALCIUM ION, SULFATE ION, TRIFLUOROETHANOL, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2G3H
DownloadVisualize
BU of 2g3h by Molmil
Cyanide Binding and Heme Cavity Conformational Transitions in Drosophila melanogaster Hexa-coordinate Hemoglobin
分子名称: CHLORIDE ION, CYANIDE ION, MAGNESIUM ION, ...
著者de Sanctis, D, Ascenzi, P, Bocedi, A, Dewilde, S, Burmester, T, Hankeln, T, Moens, L, Bolognesi, M.
登録日2006-02-20
公開日2006-10-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Cyanide binding and heme cavity conformational transitions in Drosophila melanogaster hexacoordinate hemoglobin.
Biochemistry, 45, 2006
2FZF
DownloadVisualize
BU of 2fzf by Molmil
Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
分子名称: hypothetical protein
著者Fu, Z.-Q, Liu, Z.-J, Lee, D, Kelley, L, Chen, L, Tempel, W, Shah, N, Horanyi, P, Lee, H.S, Habel, J, Dillard, B.D, Nguyen, D, Chang, S.-H, Zhang, H, Chang, J, Sugar, F.J, Poole, F.L, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-02-09
公開日2006-02-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
To be published
2FOG
DownloadVisualize
BU of 2fog by Molmil
Structure of porcine pancreatic elastase in 40% trifluoroethanol
分子名称: CALCIUM ION, SULFATE ION, TRIFLUOROETHANOL, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOD
DownloadVisualize
BU of 2fod by Molmil
Structure of porcine pancreatic elastase in 80% ethanol
分子名称: CALCIUM ION, ETHANOL, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOE
DownloadVisualize
BU of 2foe by Molmil
Structure of porcine pancreatic elastase in 80% hexane
分子名称: (2S)-HEX-5-ENE-1,2-DIOL, CALCIUM ION, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FOC
DownloadVisualize
BU of 2foc by Molmil
Structure of porcine pancreatic elastase in 55% dimethylformamide
分子名称: CALCIUM ION, DIMETHYLFORMAMIDE, SULFATE ION, ...
著者Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
登録日2006-01-13
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
6TX4
DownloadVisualize
BU of 6tx4 by Molmil
CRYSTAL STRUCTURE OF HUMAN FKBP51 FK1 DOMAIN A19T MUTANT IN COMPLEX WITH 2-PYRIDONE
分子名称: 1~{H}-pyridin-2-one, CHLORIDE ION, Peptidyl-prolyl cis-trans isomerase FKBP5, ...
著者Fiegen, D, Draxler, S.W.
登録日2020-01-13
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Hybrid Screening Approach for Very Small Fragments: X-ray and Computational Screening on FKBP51.
J.Med.Chem., 63, 2020
6TX9
DownloadVisualize
BU of 6tx9 by Molmil
CRYSTAL STRUCTURE OF HUMAN FKBP51 FK1 DOMAIN A19T MUTANT IN COMPLEX WITH HYDANTOIN
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP5, SODIUM ION, imidazolidine-2,4-dione
著者Fiegen, D, Draxler, S.W.
登録日2020-01-13
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Hybrid Screening Approach for Very Small Fragments: X-ray and Computational Screening on FKBP51.
J.Med.Chem., 63, 2020
5AD3
DownloadVisualize
BU of 5ad3 by Molmil
Bivalent binding to BET bromodomains
分子名称: 3-methoxy-N-[2-[4-[1-(3-methoxy-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)-4-piperidyl]phenoxy]ethyl]-N-methyl-[1,2,4]triazolo[4,3-b]pyridazin-6-amine, BROMODOMAIN-CONTAINING PROTEIN 4
著者Waring, M.J, Chen, H, Rabow, A.A, Walker, G, Bobby, R, Boiko, S, Bradbury, R.H, Callis, R, Dale, I, Daniels, D, Flavell, L, Holdgate, G, Jowitt, T.A, Kikhney, A, McAlister, M, Ogg, D, Patel, J, Petteruti, P, Robb, G.R, Robers, M, Stratton, N, Svergun, D.I, Wang, W, Whittaker, D.
登録日2015-08-19
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Potent and Selective Bivalent Inhibitors of Bet Bromodomains
Nat.Chem.Biol., 12, 2016
1EVV
DownloadVisualize
BU of 1evv by Molmil
CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRANSFER RNA AT 2.0 A RESOLUTION
分子名称: MAGNESIUM ION, PHENYLALANINE TRANSFER RNA, SPERMINE
著者Jovine, L, Djordjevic, S, Rhodes, D.
登録日2000-04-20
公開日2000-05-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals.
J.Mol.Biol., 301, 2000
1EEH
DownloadVisualize
BU of 1eeh by Molmil
UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
分子名称: UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE, URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
著者Bertrand, J.A, Fanchon, E, Martin, L, Chantalat, L, Auger, G, Blanot, D, van Heijenoort, J, Dideberg, O.
登録日2000-01-31
公開日2001-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献"Open" structures of MurD: domain movements and structural similarities with folylpolyglutamate synthetase.
J.Mol.Biol., 301, 2000
6UD2
DownloadVisualize
BU of 6ud2 by Molmil
co-crystal structure of compound 1 bound to human Mcl-1
分子名称: (4S,7aR,9aR,10S,11E,18R)-6'-chloro-10-[2-(3,3-difluoroazetidin-1-yl)ethoxy]-N-(dimethylsulfamoyl)-18-hydroxy-15-methyl-16-oxo-3',4',7,7a,8,9,9a,10,13,14,15,16,17,18-tetradecahydro-2'H,3H,5H-spiro[1,19-(ethanediylidene)cyclobuta[n][1,4]oxazepino[4,3-a][1,8]diazacyclohexadecine-4,1'-naphthalene]-18-carboxamide, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Huang, X, Whittington, D.
登録日2019-09-18
公開日2019-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery and in Vivo Evaluation of Macrocyclic Mcl-1 Inhibitors Featuring an alpha-Hydroxy Phenylacetic Acid Pharmacophore or Bioisostere.
J.Med.Chem., 62, 2019
6U1S
DownloadVisualize
BU of 6u1s by Molmil
Cryo-EM structure of a de novo designed 16-helix transmembrane nanopore, TMHC8_R.
分子名称: de novo designed 16-helix transmembrane nanopore, TMHC8_R
著者Johnson, M.J, Reggiano, G, Xu, C, Lu, P, Hsia, Y, Brunette, T.J, DiMaio, F, Baker, D, Kollman, J.
登録日2019-08-16
公開日2020-08-19
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Computational Design of Transmembrane Channels
To Be Published
5HO7
DownloadVisualize
BU of 5ho7 by Molmil
DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORS
分子名称: 3-phosphoinositide-dependent protein kinase 1, 5-amino-3-(methylsulfanyl)-1H-pyrazole-1,4-dicarboxamide, SULFATE ION
著者Wucherer-Plietker, M, Esdar, C, Knoechel, T, Hillertz, P, Heinrich, T, Buchstaller, H.P, Greiner, H, Dorsch, D, Calderini, M, Bruge, D, Mueller, T.J.J, Graedler, U.
登録日2016-01-19
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery of novel 7-azaindoles as PDK1 inhibitors.
Bioorg.Med.Chem.Lett., 26, 2016
4XDS
DownloadVisualize
BU of 4xds by Molmil
Deoxyguanosinetriphosphate Triphosphohydrolase from Escherichia coli with Nickel
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, NICKEL (II) ION, SULFATE ION
著者Singh, D, Gawel, D, Itsko, M, Krahn, J.M, London, R.E, Schaaper, R.M.
登録日2014-12-19
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.354 Å)
主引用文献Structure of Escherichia coli dGTP Triphosphohydrolase: A HEXAMERIC ENZYME WITH DNA EFFECTOR MOLECULES.
J.Biol.Chem., 290, 2015
6XNS
DownloadVisualize
BU of 6xns by Molmil
C3_crown-05
分子名称: C3_crown-05
著者Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
登録日2020-07-04
公開日2020-12-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Design of multi-scale protein complexes by hierarchical building block fusion.
Nat Commun, 12, 2021

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon