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3AKC
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BU of 3akc by Molmil
Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8
分子名称: ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, Cytidylate kinase, ...
著者Mega, R, Nakagawa, N, Kuramitsu, S, Masui, R.
登録日2010-07-12
公開日2011-07-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8
To be Published
2YYH
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BU of 2yyh by Molmil
Crystal structure of Nudix family protein from Aquifex aeolicus
分子名称: 8-OXO-dGTPase domain
著者Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-30
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Nudix family protein from Aquifex aeolicus
To be Published
2Z1A
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BU of 2z1a by Molmil
Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8
分子名称: 5'-nucleotidase, PHOSPHATE ION, THYMIDINE, ...
著者Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-08
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8
To be Published
5WYA
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BU of 5wya by Molmil
Structure of amino acid racemase, 2.65 A
分子名称: (2S,3S)-3-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pentanoic acid, DIMETHYL SULFOXIDE, Isoleucine 2-epimerase
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2017-01-11
公開日2017-04-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
5WYF
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BU of 5wyf by Molmil
Structure of amino acid racemase, 2.12 A
分子名称: CADMIUM ION, Isoleucine 2-epimerase, N-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2017-01-12
公開日2017-04-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
1WM9
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BU of 1wm9 by Molmil
Structure of GTP cyclohydrolase I from Thermus thermophilus HB8
分子名称: GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-05
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel Reaction Mechanism of GTP Cyclohydrolase I. High-Resolution X-Ray Crystallography of Thermus thermophilus HB8 Enzyme Complexed with a Transition State Analogue, the 8-Oxoguanine Derivative.
J.Biochem.(Tokyo), 138, 2005
4YSN
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BU of 4ysn by Molmil
Structure of aminoacid racemase in complex with PLP
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative 4-aminobutyrate aminotransferase
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2015-03-17
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
4YSV
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BU of 4ysv by Molmil
Structure of aminoacid racemase in apo-form
分子名称: Putative 4-aminobutyrate aminotransferase
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2015-03-17
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
1ULT
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BU of 1ult by Molmil
Crystal structure of tt0168 from Thermus thermophilus HB8
分子名称: CITRIC ACID, long chain fatty acid-CoA ligase
著者Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-09-16
公開日2004-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis of the substrate specific two-step catalysis of long chain fatty acyl-CoA synthetase dimer
J.Biol.Chem., 279, 2004
1V25
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BU of 1v25 by Molmil
Crystal structure of tt0168 from Thermus thermophilus HB8
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, long-chain-fatty-acid-CoA synthetase
著者Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-07
公開日2004-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer
J.Biol.Chem., 279, 2004
1VCO
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BU of 1vco by Molmil
Crystal Structure of T.th. HB8 CTP synthetase complex with Glutamine
分子名称: CTP synthetase, GLUTAMINE
著者Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-08-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structures of CTP Synthetase Reveal ATP, UTP, and Glutamine Binding Sites
Structure, 12, 2004
1V26
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BU of 1v26 by Molmil
Crystal structure of tt0168 from Thermus thermophilus HB8
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MYRISTIC ACID, ...
著者Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-07
公開日2004-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer
J.Biol.Chem., 279, 2004
1VCM
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BU of 1vcm by Molmil
Crystal Structure of T.th. HB8 CTP synthetase
分子名称: CTP synthetase
著者Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-08-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structures of CTP Synthetase Reveal ATP, UTP, and Glutamine Binding Sites
Structure, 12, 2004
1VCN
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BU of 1vcn by Molmil
Crystal Structure of T.th. HB8 CTP synthetase complex with Sulfate anion
分子名称: CTP synthetase, SULFATE ION
著者Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-08-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structures of CTP Synthetase Reveal ATP, UTP, and Glutamine Binding Sites
Structure, 12, 2004
3W7B
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BU of 3w7b by Molmil
Crystal structure of formyltetrahydrofolate deformylase from Thermus thermophilus HB8
分子名称: Formyltetrahydrofolate deformylase
著者Sampei, G, Yanagida, Y, Ogata, N, Kusano, M, Terao, K, Kawai, H, Fukai, Y, Kanagawa, M, Inoue, Y, Baba, S, Kawai, G.
登録日2013-02-28
公開日2014-01-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures and reaction mechanisms of the two related enzymes, PurN and PurU
J.Biochem., 154, 2013
2GS9
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BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
分子名称: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
著者Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2007-03-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
2YYB
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BU of 2yyb by Molmil
Crystal structure of TTHA1606 from Thermus thermophilus HB8
分子名称: Hypothetical protein TTHA1606
著者Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-28
公開日2008-05-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
3AU6
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BU of 3au6 by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ...
著者Nakane, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-28
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2Z01
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BU of 2z01 by Molmil
Crystal structure of phosphoribosylaminoimidazole synthetase from Geobacillus kaustophilus
分子名称: Phosphoribosylformylglycinamidine cyclo-ligase
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus
J.Biochem., 2015
2YW2
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BU of 2yw2 by Molmil
Crystal structure of GAR synthetase from Aquifex aeolicus in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, Phosphoribosylamine--glycine ligase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-19
公開日2007-10-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YRX
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BU of 2yrx by Molmil
Crystal structure of GAR synthetase from Geobacillus kaustophilus
分子名称: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Phosphoribosylglycinamide synthetase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YYA
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BU of 2yya by Molmil
Crystal structure of GAR synthetase from Aquifex aeolicus
分子名称: Phosphoribosylamine--glycine ligase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2007-10-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YRW
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BU of 2yrw by Molmil
Crystal structure of GAR synthetase from Geobacillus kaustophilus
分子名称: PHOSPHATE ION, Phosphoribosylglycinamide synthetase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YS6
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BU of 2ys6 by Molmil
Crystal structure of GAR synthetase from Geobacillus kaustophilus
分子名称: ADENOSINE MONOPHOSPHATE, GLYCINE, Phosphoribosylglycinamide synthetase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
3AUF
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BU of 3auf by Molmil
Crystal structure of glycinamide ribonucleotide transformylase 1 from Symbiobacterium toebii
分子名称: Glycinamide ribonucleotide transformylase 1
著者Kanagawa, M, Baba, S, Nagira, T, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-02-03
公開日2012-03-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structures and reaction mechanisms of the two related enzymes, PurN and PurU.
J.Biochem., 154, 2013

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