Search by PDB author - 日本蛋白質構造データバンク

English 日本語简体中文繁體中文 한국어

✖

ﾒﾆｭｰ

RCSB PDB PDBe BMRB Adv. Search Search help

Search by PDB author

Visualize

BU of 7c47 by Molmil

The crystal structure of Trypanosoma brucei RNase D : CMP complex
分子名称:	CCHC-type domain-containing protein, CYTIDINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
著者	Gao, Y.Q, Gan, J.H.
登録日	2020-05-15
公開日	2021-04-07
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021

Visualize

BU of 7c42 by Molmil

The crystal structure of Trypanosoma brucei RNase D
分子名称:	CCHC-type domain-containing protein, ZINC ION
著者	Gao, Y.Q, Gan, J.H.
登録日	2020-05-14
公開日	2021-04-07
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021

Visualize

BU of 7c43 by Molmil

The crystal structure of Trypanosoma brucei RNase D : AMP complex
分子名称:	ADENOSINE MONOPHOSPHATE, CCHC-type domain-containing protein, MANGANESE (II) ION, ...
著者	Gao, Y.Q, Gan, J.H.
登録日	2020-05-14
公開日	2021-04-07
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021

Visualize

BU of 7c4c by Molmil

The crystal structure of Trypanosoma brucei RNase D : GMP complex
分子名称:	CCHC-type domain-containing protein, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
著者	Gao, Y.Q, Gan, J.H.
登録日	2020-05-15
公開日	2021-04-07
実験手法	X-RAY DIFFRACTION (2.265 Å)
主引用文献	Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021

Visualize

BU of 7c4b by Molmil

The crystal structure of Trypanosoma brucei RNase D : UMP complex
分子名称:	CCHC-type domain-containing protein, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ...
著者	Gao, Y.Q, Gan, J.H.
登録日	2020-05-15
公開日	2021-04-07
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (2.101 Å)
主引用文献	Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021

Visualize

BU of 7e8j by Molmil

Crystal structure of Proteinaceous RNase P (PRORP) from Thermococcus celer
分子名称:	RNA-free ribonuclease P
著者	Li, Y.Y, Gan, J.H.
登録日	2021-03-02
公開日	2022-03-02
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P. Nat Commun, 13, 2022

Visualize

BU of 7e8k by Molmil

Crystal structure of Proteinaceous RNase P (PRORP) from Planctomycetes bacterium GWF2_40_8
分子名称:	RNA-free ribonuclease P, SULFATE ION
著者	Li, Y.Y, Gan, J.H.
登録日	2021-03-02
公開日	2022-03-02
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P. Nat Commun, 13, 2022

Visualize

BU of 7e8o by Molmil

Crystal structure of proteinaceous RNase P(PRORP) from Planctomycetes bacterium GWF2_40_8 complexed with Escherichia coli histidine pre-tRNA
分子名称:	CALCIUM ION, RNA-free ribonuclease P, histidine pre-tRNA
著者	Li, Y.Y, Gan, J.H.
登録日	2021-03-02
公開日	2022-03-02
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.804 Å)
主引用文献	Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P. Nat Commun, 13, 2022

Visualize

BU of 7d3d by Molmil

Crystal structure of SPOP bound with a peptide
分子名称:	GLU-VAL-SER-ILE-ILE-GLN-GLY-ALA-ASP-SER-THR-THR, GLYCEROL, Speckle-type POZ protein
著者	Yang, C.-G, Gan, J.H.
登録日	2020-09-18
公開日	2020-11-18
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	A peptide binder of E3 ligase adaptor SPOP disrupts oncogenic SPOP-protein interactions in kidney cancer cells. Chin.J.Chem., 39, 2021

Visualize

BU of 7d33 by Molmil

The Pb2+ complexed structure of TBA G8C mutant
分子名称:	DNA (5'-D(GPGPTPTPGPGPTPCPTPGPGPTPTPGP*G)-3'), LEAD (II) ION
著者	Liu, H.H, Gao, Y.Q, Sheng, J, Gan, J.H.
登録日	2020-09-18
公開日	2021-09-22
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.117 Å)
主引用文献	Structure-guided development of Pb 2+ -binding DNA aptamers. Sci Rep, 12, 2022

Visualize

BU of 7d31 by Molmil

The TBA-Pb2+ complex in P41212 space group
分子名称:	DNA (5'-D(GPGPTPTPGPGPTPGPTPGPGPTPTPGP*G)-3'), LEAD (II) ION
著者	Liu, H.H, Gao, Y.Q, Sheng, J, Gan, J.H.
登録日	2020-09-18
公開日	2021-09-22
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (1.396 Å)
主引用文献	Structure-guided development of Pb 2+ -binding DNA aptamers. Sci Rep, 12, 2022

Visualize

BU of 7d32 by Molmil

The TBA-Pb2+ complex in P41212 space group
分子名称:	DNA (5'-D(GPGPTPTPGPGPTPGPTPGPGPTPTPGP*G)-3'), LEAD (II) ION
著者	Liu, H.H, Gao, Y.Q, Sheng, J, Gan, J.H.
登録日	2020-09-18
公開日	2021-09-22
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.707 Å)
主引用文献	Structure-guided development of Pb 2+ -binding DNA aptamers. Sci Rep, 12, 2022

Visualize

BU of 7dwh by Molmil

Complex structure of SAM-dependent methyltransferase ribozyme
分子名称:	COPPER (II) ION, RNA (45-MER), S-ADENOSYLMETHIONINE, ...
著者	Jiang, H.Y, Gao, Y.Q, Chen, D.R, Murchie, A.
登録日	2021-01-17
公開日	2021-10-27
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (3.1 Å)
主引用文献	The identification and characterization of a selected SAM-dependent methyltransferase ribozyme that is present in natural sequences Nat Catal, 4, 2021

Visualize

BU of 5daj by Molmil

Crystal structure of NalD, the secondary repressor of MexAB-OprM multidrug efflux pump in Pseudomonas aeruginosa
分子名称:	NalD
著者	Chen, W.Z, Wang, D, Huang, S.Q, Hu, Q.Y, Liu, X.C, Gan, J.H, Chen, H.
登録日	2015-08-20
公開日	2016-04-20
最終更新日	2023-04-12
実験手法	X-RAY DIFFRACTION (2.65 Å)
主引用文献	Novobiocin binding to NalD induces the expression of the MexAB-OprM pump in Pseudomonas aeruginosa Mol.Microbiol., 100, 2016

Visualize

BU of 5h9t by Molmil

Crystal structure of native NalD at resolution of 2.9, the secondary repressor of MexAB-OprM multidrug efflux pump in Pseudomonas aeruginosa
分子名称:	NalD
著者	Chen, W.Z, Wang, D, Huang, S.Q, Hu, Q.Y, Liu, X.C, Gan, J.H, Chen, H.
登録日	2015-12-29
公開日	2016-04-20
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.89 Å)
主引用文献	Novobiocin binding to NalD induces the expression of the MexAB-OprM pump in Pseudomonas aeruginosa. Mol. Microbiol., 100, 2016

221051

件を2024-06-12に公開中

PDB statistics

PDBj update info

Contact PDBj

numon