Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7XDJ
DownloadVisualize
BU of 7xdj by Molmil
Crystal structure of actinomycin D-echinomycin-d(AGCGCGT/ACGAGCT) complex
分子名称: 2-CARBOXYQUINOXALINE, CHLORIDE ION, DNA (5'-D(P*AP*CP*GP*AP*GP*CP*(BRU))-3'), ...
著者Chien, C.M, Satange, R.B, Hou, M.H.
登録日2022-03-27
公開日2022-12-14
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.435 Å)
主引用文献Staggered intercalation of DNA duplexes with base-pair modulation by two distinct drug molecules induces asymmetric backbone twisting and structure polymorphism.
Nucleic Acids Res., 50, 2022
3T5E
DownloadVisualize
BU of 3t5e by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-4
分子名称: 2,7-bis[4-(4-methylpiperazin-1-yl)butyl]-4,9-bis{[4-(4-methylpiperazin-1-yl)butyl]amino}benzo[lmn][3,8]phenanthroline-1 ,3,6,8(2H,7H)-tetrone, POTASSIUM ION, human telomeric DNA sequence
著者Collie, G.W, Promontorio, R, Parkinson, G.N.
登録日2011-07-27
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
8FDP
DownloadVisualize
BU of 8fdp by Molmil
The native structure of a dodecamer: 5'-CGCAAATTTGCG-3
分子名称: DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')
著者Ogbonna, E, Wilson, W.D.
登録日2022-12-04
公開日2023-02-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences.
Acs Bio Med Chem Au, 3, 2023
8FDQ
DownloadVisualize
BU of 8fdq by Molmil
An AT-specific DNA 5-CGCAAATTTCGC-3' with benzimidazole (DB1476) complex
分子名称: 4,4'-(1H-benzimidazole-2,6-diyl)di(benzene-1-carboximidamide), DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION
著者Ogboona, E.N, Wilson, W.D.
登録日2022-12-04
公開日2023-02-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences.
Acs Bio Med Chem Au, 3, 2023
3SC8
DownloadVisualize
BU of 3sc8 by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-3
分子名称: 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, Human telomeric repeat sequence, POTASSIUM ION
著者Collie, G.W, Promontorio, R, Parkinson, G.N.
登録日2011-06-07
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
6J0I
DownloadVisualize
BU of 6j0i by Molmil
Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
分子名称: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Satange, R.B, Chuang, C.Y, Hou, M.H.
登録日2018-12-24
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
6J0H
DownloadVisualize
BU of 6j0h by Molmil
Crystal structure of Actinomycin D- d(TTGGCGAA) complex
分子名称: Actinomycin D, DNA (5'-D(P*TP*TP*GP*GP*CP*GP*AP*A)-3'), SODIUM ION
著者Satange, R.B, Hou, M.H.
登録日2018-12-24
公開日2019-07-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
6L75
DownloadVisualize
BU of 6l75 by Molmil
Crystal structure of d(GTGGGCCGAC)2 DNA duplex
分子名称: DNA (5'-D(P*GP*TP*GP*GP*GP*CP*CP*GP*AP*C)-3')
著者Hou, M.H, Satange, R.B, Zeng, J.Y.
登録日2019-10-31
公開日2021-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.578 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
1EHV
DownloadVisualize
BU of 1ehv by Molmil
A NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTURE
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Johansson, E.M.
登録日2000-02-23
公開日2000-07-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure.
J.Mol.Biol., 300, 2000

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon