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1GOA
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BU of 1goa by Molmil
COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
分子名称: RIBONUCLEASE H
著者Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S.
登録日1993-05-10
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
1GOB
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BU of 1gob by Molmil
COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
分子名称: RIBONUCLEASE H
著者Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S.
登録日1993-05-10
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
1GOC
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BU of 1goc by Molmil
COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
分子名称: RIBONUCLEASE H
著者Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S.
登録日1993-05-10
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
3A2F
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BU of 3a2f by Molmil
Crystal Structure of Pyrococcus furiosus DNA polymerase/PCNA monomer mutant complex
分子名称: DNA polymerase, DNA polymerase sliding clamp
著者Nishida, H, Ishino, Y, Morikawa, K.
登録日2009-05-15
公開日2009-11-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
To be Published
3ANW
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BU of 3anw by Molmil
A protein complex essential initiation of DNA replication
分子名称: Putative uncharacterized protein
著者Oyama, T, Shirai, T, Nagasawa, N, Ishino, Y, Morikawa, K.
登録日2010-09-10
公開日2011-07-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Architectures of archaeal GINS complexes, essential DNA replication initiation factors
Bmc Biol., 9, 2011
7VSA
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BU of 7vsa by Molmil
E. coli Ribonuclease HI in complex with two Mg2+
分子名称: GLYCEROL, MAGNESIUM ION, Ribonuclease HI, ...
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7VSB
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BU of 7vsb by Molmil
E. coli Ribonuclease HI in complex with one Zn2+ (His124 N-delta binding)
分子名称: Ribonuclease HI, ZINC ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7VSC
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BU of 7vsc by Molmil
E. coli Ribonuclease HI in complex with one Mg2+ (1)
分子名称: MAGNESIUM ION, Ribonuclease HI, SULFATE ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
6LCX
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BU of 6lcx by Molmil
Crosslinked alpha(Ni)-beta(Ni) human hemoglobin A in the T quaternary structure at 95 K: Light
分子名称: BUT-2-ENEDIAL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-11-20
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
4J20
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BU of 4j20 by Molmil
X-ray structure of the cytochrome c-554 from chlorobaculum tepidum
分子名称: Cytochrome c-555, HEME B/C, ISOPROPYL ALCOHOL, ...
著者Unno, M, Yu, L.J, Wang-otomo, Z.Y.
登録日2013-02-04
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure analysis and characterization of the cytochrome c-554 from thermophilic green sulfur photosynthetic bacterium Chlorobaculum tepidum
Photosynth.Res., 118, 2013
7VSD
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BU of 7vsd by Molmil
E. coli Ribonuclease HI in complex with one Mg2+ (2)
分子名称: MAGNESIUM ION, Ribonuclease HI, SULFATE ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7VSE
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BU of 7vse by Molmil
E. coli Ribonuclease HI in complex one Zn2+ (His124 N-epsilon binding)
分子名称: GLYCEROL, Ribonuclease HI, SULFATE ION, ...
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
1RCK
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BU of 1rck by Molmil
THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
1RCL
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BU of 1rcl by Molmil
THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
6KAP
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BU of 6kap by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 95 K: Light
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-06-23
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KAT
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BU of 6kat by Molmil
Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 95 K: Light
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-06-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KAI
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BU of 6kai by Molmil
Crosslinked alpha(Ni)-beta(Fe) human hemoglobin A in the T quaternary structure at 95 K: Light
分子名称: BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-06-23
公開日2020-02-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KAS
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BU of 6kas by Molmil
Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 95 K: Dark
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-06-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6LCW
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BU of 6lcw by Molmil
Crosslinked alpha(Ni)-beta(Ni) human hemoglobin A in the T quaternary structure at 95 K: Dark
分子名称: BUT-2-ENEDIAL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-11-20
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5Y
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BU of 6l5y by Molmil
Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 140 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5W
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BU of 6l5w by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 140 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5X
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BU of 6l5x by Molmil
Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 95 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5V
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BU of 6l5v by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 95 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
1N75
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BU of 1n75 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
1N77
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BU of 1n77 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-13
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003

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