8UF0
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![BU of 8uf0 by Molmil](/molmil-images/mine/8uf0) | T33-ml23 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms | 分子名称: | T33-ml23-redesigned-CutA-fold, T33-ml23-redesigned-tandem-BMC-T-fold | 著者 | Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. | 登録日 | 2023-10-03 | 公開日 | 2023-11-15 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (2.02 Å) | 主引用文献 | A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
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8UN1
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![BU of 8un1 by Molmil](/molmil-images/mine/8un1) | T33-ml23 Assembly Intermediate - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms | 分子名称: | T33-ml23-redesigned-CutA-fold, T33-ml23-redesigned-tandem-BMC-T-fold | 著者 | Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. | 登録日 | 2023-10-18 | 公開日 | 2024-03-06 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | 主引用文献 | A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
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8UMR
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![BU of 8umr by Molmil](/molmil-images/mine/8umr) | T33-ml35 Assembly Intermediate - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms | 分子名称: | T33-ml35-redesigned-CutA-fold, T33-ml35-redesigned-TPR-domain-fold | 著者 | Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. | 登録日 | 2023-10-18 | 公開日 | 2024-03-06 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (4.42 Å) | 主引用文献 | A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
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8UI2
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![BU of 8ui2 by Molmil](/molmil-images/mine/8ui2) | T33-ml28 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms | 分子名称: | T33-ml28-redesigned-CutA-fold, T33-ml28-redesigned-tandem-BMC-T-fold | 著者 | Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. | 登録日 | 2023-10-09 | 公開日 | 2024-03-06 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (2.73 Å) | 主引用文献 | A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
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8UKM
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![BU of 8ukm by Molmil](/molmil-images/mine/8ukm) | T33-ml30 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms | 分子名称: | T33-ml30-redesigned-4-OT-fold, T33-ml30-redesigned-tandem-BMC-T-fold | 著者 | Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. | 登録日 | 2023-10-14 | 公開日 | 2024-03-06 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (4.2 Å) | 主引用文献 | A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
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4ZSX
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![BU of 4zsx by Molmil](/molmil-images/mine/4zsx) | |
5CY5
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![BU of 5cy5 by Molmil](/molmil-images/mine/5cy5) | Crystal structure of the T33-51H designed self-assembling protein tetrahedron | 分子名称: | T33-51H-A, T33-51H-B | 著者 | Cannon, K.A, Cascio, D, Park, R, Boyken, S, King, N, Yeates, T.O. | 登録日 | 2015-07-30 | 公開日 | 2016-08-10 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Design and structure of two new protein cages illustrate successes and ongoing challenges in protein engineering. Protein Sci., 29, 2020
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5D4P
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![BU of 5d4p by Molmil](/molmil-images/mine/5d4p) | Structure of CPII bound to ADP and bicarbonate, from Thiomonas intermedia K12 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, Putative Nitrogen regulatory protein P-II GlnB | 著者 | Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O. | 登録日 | 2015-08-08 | 公開日 | 2016-09-28 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein. J.Mol.Biol., 428, 2016
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4ZSZ
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![BU of 4zsz by Molmil](/molmil-images/mine/4zsz) | |
4ZSV
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![BU of 4zsv by Molmil](/molmil-images/mine/4zsv) | |
5D4O
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![BU of 5d4o by Molmil](/molmil-images/mine/5d4o) | Structure of CPII, a nitrogen regulatory PII-like protein from Thiomonas intermedia K12, bound to ADP, AMP and bicarbonate. | 分子名称: | ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, ... | 著者 | Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O. | 登録日 | 2015-08-08 | 公開日 | 2016-09-28 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein. J.Mol.Biol., 428, 2016
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5D4L
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![BU of 5d4l by Molmil](/molmil-images/mine/5d4l) | Structure of the apo form of CPII from Thiomonas intermedia K12, a nitrogen regulatory PII-like protein | 分子名称: | Nitrogen regulatory protein P-II | 著者 | Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O. | 登録日 | 2015-08-08 | 公開日 | 2016-09-28 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein. J.Mol.Biol., 428, 2016
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3CIM
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![BU of 3cim by Molmil](/molmil-images/mine/3cim) | Carboxysome shell protein, CcmK2 C-terminal deletion mutant | 分子名称: | Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION | 著者 | Tanaka, S, Sawaya, M.R, Yeates, T.O. | 登録日 | 2008-03-11 | 公開日 | 2009-02-03 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Insights from multiple structures of the shell proteins from the beta-carboxysome. Protein Sci., 18, 2009
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3CGI
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![BU of 3cgi by Molmil](/molmil-images/mine/3cgi) | |
3CJC
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![BU of 3cjc by Molmil](/molmil-images/mine/3cjc) | Actin dimer cross-linked by V. cholerae MARTX toxin and complexed with DNase I and Gelsolin-segment 1 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... | 著者 | Sawaya, M.R, Kudryashov, D.S, Pashkov, I, Reisler, E, Yeates, T.O. | 登録日 | 2008-03-12 | 公開日 | 2008-03-25 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (3.9 Å) | 主引用文献 | Connecting actin monomers by iso-peptide bond is a toxicity mechanism of the Vibrio cholerae MARTX toxin. Proc.Natl.Acad.Sci.USA, 105, 2008
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3DNC
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![BU of 3dnc by Molmil](/molmil-images/mine/3dnc) | Carboxysome shell protein, CcmK2 C-terminal deletion mutant, with a closer spacing between hexamers | 分子名称: | Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION | 著者 | Tanaka, S, Sawaya, M.R, Yeates, T.O. | 登録日 | 2008-07-01 | 公開日 | 2009-01-20 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | Insights from multiple structures of the shell proteins from the beta-carboxysome. Protein Sci., 18, 2009
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3CJB
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![BU of 3cjb by Molmil](/molmil-images/mine/3cjb) | Actin dimer cross-linked by V. cholerae MARTX toxin and complexed with Gelsolin-segment 1 | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... | 著者 | Sawaya, M.R, Kudryashov, D.S, Pashkov, I, Reisler, E, Yeates, T.O. | 登録日 | 2008-03-12 | 公開日 | 2008-03-25 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (3.21 Å) | 主引用文献 | Connecting actin monomers by iso-peptide bond is a toxicity mechanism of the Vibrio cholerae MARTX toxin. Proc.Natl.Acad.Sci.USA, 105, 2008
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2PY8
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![BU of 2py8 by Molmil](/molmil-images/mine/2py8) | RbcX | 分子名称: | 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, Hypothetical protein rbcX | 著者 | Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O. | 登録日 | 2007-05-15 | 公開日 | 2007-10-09 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | 主引用文献 | Structure of the RuBisCO chaperone RbcX from Synechocystis sp. PCC6803. Acta Crystallogr.,Sect.D, 63, 2007
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3DN9
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![BU of 3dn9 by Molmil](/molmil-images/mine/3dn9) | |
2Q1N
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![BU of 2q1n by Molmil](/molmil-images/mine/2q1n) | Actin Dimer Cross-linked Between Residues 41 and 374 | 分子名称: | Actin, alpha skeletal muscle, CALCIUM ION, ... | 著者 | Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Adisetiyo, H, Reisler, E, Yeates, T.O. | 登録日 | 2007-05-25 | 公開日 | 2007-06-05 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Multiple crystal structures of actin dimers and their implications for interactions in the actin filament. Acta Crystallogr.,Sect.D, 64, 2008
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2Q36
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![BU of 2q36 by Molmil](/molmil-images/mine/2q36) | Actin Dimer Cross-linked between Residues 191 and 374 and complexed with Kabiramide C | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... | 著者 | Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Reisler, E, Yeates, T.O. | 登録日 | 2007-05-29 | 公開日 | 2007-06-05 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Multiple crystal structures of actin dimers and their implications for interactions in the actin filament. Acta Crystallogr.,Sect.D, 64, 2008
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2QW7
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![BU of 2qw7 by Molmil](/molmil-images/mine/2qw7) | Carboxysome Subunit, CcmL | 分子名称: | Carbon dioxide concentrating mechanism protein ccmL, GLYCEROL | 著者 | Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O. | 登録日 | 2007-08-09 | 公開日 | 2008-03-04 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Atomic-level models of the bacterial carboxysome shell. Science, 319, 2008
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1OZU
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![BU of 1ozu by Molmil](/molmil-images/mine/1ozu) | Crystal Structure of Familial ALS Mutant S134N of human Cu,Zn Superoxide Dismutase (CuZnSOD) to 1.3A resolution | 分子名称: | SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION | 著者 | Elam, J.S, Taylor, A.B, Strange, R, Antonyuk, S, Doucette, P.A, Rodriguez, J.A, Hasnain, S.S, Hayward, L.J, Valentine, J.S, Yeates, T.O, Hart, P.J. | 登録日 | 2003-04-09 | 公開日 | 2003-05-27 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Amyloid-like Filaments and Water-filled Nanotubes Formed by SOD1 Mutant Proteins Linked to Familial ALS Nat.Struct.Biol., 10, 2003
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1OZT
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![BU of 1ozt by Molmil](/molmil-images/mine/1ozt) | Crystal Structure of apo-H46R Familial ALS Mutant human Cu,Zn Superoxide Dismutase (CuZnSOD) to 2.5A resolution | 分子名称: | Superoxide dismutase [Cu-Zn] | 著者 | Elam, J.S, Taylor, A.B, Strange, R, Antonyuk, S, Doucette, P.A, Rodriguez, J.A, Hasnain, S.S, Hayward, L.J, Valentine, J.S, Yeates, T.O, Hart, P.J. | 登録日 | 2003-04-09 | 公開日 | 2003-05-27 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Amyloid-like Filaments and Water-filled Nanotubes Formed by SOD1 Mutant Proteins Linked to Familial ALS Nat.Struct.Biol., 10, 2003
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1OY0
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![BU of 1oy0 by Molmil](/molmil-images/mine/1oy0) | The crystal Structure of the First Enzyme of Pantothenate Biosynthetic Pathway, Ketopantoate Hydroxymethyltransferase from Mycobacterium Tuberculosis Shows a Decameric Assembly and Terminal Helix-Swapping | 分子名称: | Ketopantoate hydroxymethyltransferase, MAGNESIUM ION | 著者 | Chaudhuri, B.N, Sawaya, M.R, Kim, C.Y, Waldo, G.S, Park, M.S, Terwilliger, T.C, Yeates, T.O, TB Structural Genomics Consortium (TBSGC) | 登録日 | 2003-04-03 | 公開日 | 2003-07-15 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | The Crystal Structure of the First Enzyme in the Pantothenate Biosynthetic Pathway,
Ketopantoate Hydroxymethyltransferase, from M. tuberculosis Structure, 11, 2003
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