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2ACR
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BU of 2acr by Molmil
AN ANION BINDING SITE IN HUMAN ALDOSE REDUCTASE: MECHANISTIC IMPLICATIONS FOR THE BINDING OF CITRATE, CACODYLATE, AND GLUCOSE-6-PHOSPHATE
分子名称: ALDOSE REDUCTASE, CACODYLATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Harrison, D.H, Bohren, K.M, Gabbay, K.H, Petsko, G.A, Ringe, D.
登録日1994-04-15
公開日1994-07-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献An anion binding site in human aldose reductase: mechanistic implications for the binding of citrate, cacodylate, and glucose 6-phosphate.
Biochemistry, 33, 1994
2ACS
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BU of 2acs by Molmil
AN ANION BINDING SITE IN HUMAN ALDOSE REDUCTASE: MECHANISTIC IMPLICATIONS FOR THE BINDING OF CITRATE, CACODYLATE, AND GLUCOSE-6-PHOSPHATE
分子名称: ALDOSE REDUCTASE, CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Harrison, D.H, Bohren, K.M, Gabbay, K.H, Petsko, G.A, Ringe, D.
登録日1994-04-15
公開日1994-07-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献An anion binding site in human aldose reductase: mechanistic implications for the binding of citrate, cacodylate, and glucose 6-phosphate.
Biochemistry, 33, 1994
2PZV
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BU of 2pzv by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas Putida (pksi) with bound Phenol
分子名称: PHENOL, Steroid Delta-isomerase
著者Pybus, B, Caaveiro, J.M.M, Petsko, G.A, Ringe, D.
登録日2007-05-18
公開日2007-06-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Testing Electrostatic complementarity in Enzyme Catalysis: Hydrogen Bonding in the Ketosteroid Isomerase Oxyanion Hole
PLoS Biol., 4, 2006
3PAA
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BU of 3paa by Molmil
Mechanism of inactivation of E. coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid (S-ADFA) pH 8.0
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-aminofuran-2-carboxylic acid, Aspartate aminotransferase, ...
著者Liu, D, Pozharski, E, Fu, M, Silverman, R.B, Ringe, D.
登録日2010-10-19
公開日2010-12-01
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of inactivation of Escherichia coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid .
Biochemistry, 49, 2010
2ETL
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BU of 2etl by Molmil
Crystal Structure of Ubiquitin Carboxy-terminal Hydrolase L1 (UCH-L1)
分子名称: CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L1
著者Das, C, Hoang, Q.Q, Kreinbring, C.A, Luchansky, S.J, Meray, R.K, Ray, S.S, Lansbury, P.T, Ringe, D, Petsko, G.A.
登録日2005-10-27
公開日2006-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1.
Proc.Natl.Acad.Sci.USA, 103, 2006
4RHN
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BU of 4rhn by Molmil
HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT COMPLEXED WITH ADENOSINE
分子名称: HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN, alpha-D-ribofuranose
著者Brenner, C, Garrison, P, Gilmour, J, Peisach, D, Ringe, D, Petsko, G.A, Lowenstein, J.M.
登録日1997-02-26
公開日1997-06-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.
Nat.Struct.Biol., 4, 1997
3PA9
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BU of 3pa9 by Molmil
Mechanism of inactivation of E. coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid (S-ADFA) pH 7.5
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-aminofuran-2-carboxylic acid, Aspartate aminotransferase, ...
著者Liu, D, Pozharski, E, Fu, M, Silverman, R.B, Ringe, D.
登録日2010-10-19
公開日2010-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanism of inactivation of Escherichia coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid .
Biochemistry, 49, 2010
1S5M
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BU of 1s5m by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
分子名称: MANGANESE (II) ION, SODIUM ION, Xylose isomerase, ...
著者Fenn, T.D, Ringe, D, Petsko, G.A.
登録日2004-01-21
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
1S5N
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BU of 1s5n by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
分子名称: HYDROXIDE ION, MANGANESE (II) ION, SODIUM ION, ...
著者Fenn, T.D, Ringe, D, Petsko, G.A.
登録日2004-01-21
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
7JXG
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BU of 7jxg by Molmil
Structural model for Fe-containing human acireductone dioxygenase
分子名称: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, FE (II) ION
著者Pochapsky, T.C, Liu, X, Deshpande, A, Ringe, D, Garber, A, Ryan, J.
登録日2020-08-27
公開日2020-11-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Model for the Solution Structure of Human Fe(II)-Bound Acireductone Dioxygenase and Interactions with the Regulatory Domain of Matrix Metalloproteinase I (MMP-I).
Biochemistry, 59, 2020
1A0G
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BU of 1a0g by Molmil
L201A MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, D-AMINO ACID AMINOTRANSFERASE
著者Sugio, S, Kashima, A, Kishimoto, K, Peisach, D, Petsko, G.A, Ringe, D, Yoshimura, T, Esaki, N.
登録日1997-11-30
公開日1998-06-03
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of L201A mutant of D-amino acid aminotransferase at 2.0 A resolution: implication of the structural role of Leu201 in transamination.
Protein Eng., 11, 1998
1RKX
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BU of 1rkx by Molmil
Crystal Structure at 1.8 Angstrom of CDP-D-glucose 4,6-dehydratase from Yersinia pseudotuberculosis
分子名称: CDP-glucose-4,6-dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Vogan, E.M, Bellamacina, C, He, X, Liu, H.W, Ringe, D, Petsko, G.A.
登録日2003-11-23
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure at 1.8 A Resolution of CDP-d-Glucose 4,6-Dehydratase from Yersinia pseudotuberculosis
Biochemistry, 43, 2004
1DAA
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BU of 1daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Sugio, S, Peisach, D, Ringe, D.
登録日1995-06-09
公開日1995-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a D-amino acid aminotransferase: how the protein controls stereoselectivity.
Biochemistry, 34, 1995
1QRZ
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BU of 1qrz by Molmil
CATALYTIC DOMAIN OF PLASMINOGEN
分子名称: PLASMINOGEN
著者Peisach, E, Wang, J, de los Santos, T, Reich, E, Ringe, D.
登録日1999-06-16
公開日1999-10-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the proenzyme domain of plasminogen.
Biochemistry, 38, 1999
1SOA
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BU of 1soa by Molmil
Human DJ-1 with sulfinic acid
分子名称: RNA-binding protein regulatory subunit; oncogene DJ1
著者Canet-Aviles, R, Wilson, M.A, Miller, D.W, Ahmad, R, McLendon, C, Bandyopadhyay, S, Baptista, M.J, Ringe, D, Petsko, G.A, Cookson, M.R.
登録日2004-03-13
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Parkinson's disease protein DJ-1 is neuroprotective due to cysteine-sulfinic acid-driven mitochondrial localization.
Proc.Natl.Acad.Sci.USA, 101, 2004
1ASA
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BU of 1asa by Molmil
THE STRUCTURAL BASIS FOR THE REDUCED ACTIVITY OF THE Y226F(Y225F) ACTIVE SITE MUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE
分子名称: ASPARTATE AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Schumacher, C, Ringe, D.
登録日1993-08-27
公開日1994-04-30
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Structural Basis for the Reduced Activity of the Y226F(Y225F) Active Site Mutant of E. Coli Aspartate Aminotransferase
To be Published
3VGN
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BU of 3vgn by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas putida (pKSI) with bound 3-fluoro-4-nitrophenol
分子名称: 3-fluoro-4-nitrophenol, Steroid Delta-isomerase
著者Caaveiro, J.M.M, Pybus, B, Ringe, D, Petsko, G.A, Sigala, P.A.
登録日2011-08-16
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Quantitative dissection of hydrogen bond-mediated proton transfer in the ketosteroid isomerase active site
Proc.Natl.Acad.Sci.USA, 110, 2013
1XCV
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BU of 1xcv by Molmil
Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II)
分子名称: Diphtheria toxin repressor mutant, NICKEL (II) ION
著者D'aquino, J.A, Ringe, D.
登録日2004-09-03
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of metal ion activation of the diphtheria toxin repressor DtxR.
Proc.Natl.Acad.Sci.USA, 102, 2005
3RHN
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BU of 3rhn by Molmil
HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT COMPLEXED WITH GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN
著者Brenner, C, Garrison, P, Gilmour, J, Peisach, D, Ringe, D, Petsko, G.A, Lowenstein, J.M.
登録日1997-02-11
公開日1997-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.
Nat.Struct.Biol., 4, 1997
2P8O
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BU of 2p8o by Molmil
Crystal Structure of a Benzohydroxamic Acid/Vanadate complex bound to chymotrypsin A
分子名称: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
著者Moulin, A, Bell, J.H, Pratt, R.F, Ringe, D.
登録日2007-03-22
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of chymotrypsin by a complex of ortho-vanadate and benzohydroxamic Acid: structure of the inert complex and its mechanistic interpretation.
Biochemistry, 46, 2007
2A77
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BU of 2a77 by Molmil
Anti-Cocaine Antibody 7.5.21, Crystal Form II
分子名称: GLYCEROL, Immunoglobulin Heavy Chain, Immunoglobulin Light Chain, ...
著者Pozharski, E, Hewagama, A, Shanafelt, A, Ringe, D, Petsko, G.A.
登録日2005-07-04
公開日2005-07-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Flexibility of Packing: Four Crystal Forms of an Anti-Cocaine Antibody 7.5.21
To be Published
4MGR
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BU of 4mgr by Molmil
The crystal structure of Bacillus subtilis GabR, an autorepressor and PLP- and GABA-dependent transcriptional activator of gabT
分子名称: ACETATE ION, HTH-type transcriptional regulatory protein GabR, IMIDAZOLE, ...
著者Wu, R, Edayathumangalam, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
登録日2013-08-28
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
2A5H
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BU of 2a5h by Molmil
2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).
分子名称: IRON/SULFUR CLUSTER, L-lysine 2,3-aminomutase, LYSINE, ...
著者Lepore, B.W, Ruzicka, F.J, Frey, P.A, Ringe, D.
登録日2005-06-30
公開日2005-10-04
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AB0
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Crystal Structure of E. coli protein YajL (ThiJ)
分子名称: YajL
著者Wilson, M.A, Ringe, D, Petsko, G.A.
登録日2005-07-14
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The Atomic Resolution Crystal Structure of the YajL (ThiJ) Protein from Escherichia coli: A Close Prokaryotic Homologue of the Parkinsonism-associated Protein DJ-1.
J.Mol.Biol., 353, 2005
2A1W
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Anti-cocaine antibody 7.5.21, crystal form I
分子名称: SULFATE ION, immunoglobulin heavy chain, immunoglobulin light chain kappa
著者Pozharski, E, Hewagama, A, Shanafelt, A, Ringe, D, Petsko, G.A.
登録日2005-06-21
公開日2005-06-28
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Flexibility Of Packing: Four Crystal Forms Of An Anti-Cocaine Antibody 7.5.21
To be Published

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