Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZW7
DownloadVisualize
BU of 2zw7 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and coenzyme A
分子名称: BLEOMYCIN A2, Bleomycin acetyltransferase, COENZYME A
著者Oda, K, Matoba, Y, Sugiyama, M.
登録日2008-12-01
公開日2009-11-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW5
DownloadVisualize
BU of 2zw5 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal
分子名称: Bleomycin acetyltransferase, COENZYME A
著者Oda, K, Matoba, Y, Sugiyama, M.
登録日2008-12-01
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW4
DownloadVisualize
BU of 2zw4 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the orthorhombic crystal
分子名称: Bleomycin acetyltransferase, COENZYME A, SULFATE ION
著者Oda, K, Matoba, Y, Sugiyama, M.
登録日2008-12-01
公開日2009-11-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
3WSW
DownloadVisualize
BU of 3wsw by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-bound form
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, L-lactate dehydrogenase, ...
著者Matoba, Y, Sugiyama, M.
登録日2014-03-27
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WSV
DownloadVisualize
BU of 3wsv by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-unbound form
分子名称: GLYCEROL, L-lactate dehydrogenase
著者Matoba, Y, Sugiyama, M.
登録日2014-03-27
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WA6
DownloadVisualize
BU of 3wa6 by Molmil
Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: SULFATE ION, tannase
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum
Proteins, 81, 2013
3WA7
DownloadVisualize
BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
3WCK
DownloadVisualize
BU of 3wck by Molmil
Crystal structure of monomeric photosensitizing fluorescent protein, Supernova
分子名称: Monomeric photosenitizing fluorescent protein supernova
著者Sakai, N, Matsuda, T, Takemoto, K, Nagai, T.
登録日2013-05-27
公開日2013-10-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation
Sci Rep, 3, 2013
3AL9
DownloadVisualize
BU of 3al9 by Molmil
Mouse Plexin A2 extracellular domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2
著者Nogi, T, Yasui, N, Mihara, E, Takagi, J.
登録日2010-07-28
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AFC
DownloadVisualize
BU of 3afc by Molmil
Mouse Semaphorin 6A extracellular domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin-6A
著者Yasui, N, Nogi, T, Mihara, E, Takagi, J.
登録日2010-02-26
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
DownloadVisualize
BU of 3al8 by Molmil
Plexin A2 / Semaphorin 6A complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2, ...
著者Nogi, T, Yasui, N, Mihara, E, Takagi, J.
登録日2010-07-28
公開日2010-10-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
2ZMX
DownloadVisualize
BU of 2zmx by Molmil
Crystal structure of the met1-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 36 hours
分子名称: CADDIE, COPPER (II) ION, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2008-04-21
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
J.Biol.Chem., 281, 2006
1N5D
DownloadVisualize
BU of 1n5d by Molmil
CRYSTAL STRUCTURE OF PORCINE TESTICULAR CARBONYL REDUCTASE/ 20BETA-HYDROXYSTEROID DEHYDROGENASE
分子名称: CARBONYL REDUCTASE/20BETA-HYDROXYSTEROID DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Ghosh, D.
登録日2002-11-05
公開日2002-11-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Porcine Carbonyl Reductase: Structural Basis for a Functional Monomer in Short-Chain Dehydrogenases/Reductases
J.Biol.Chem., 276, 2001
3N4O
DownloadVisualize
BU of 3n4o by Molmil
Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-one
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, 5'-D(*CP*GP*CP*GP*AP*AP*TP*(B7C)P*CP*GP*CP*G)-3'
著者Takenaka, A, Juan, E.C.M, Shimizu, S.
登録日2010-05-22
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res., 2010
3N4N
DownloadVisualize
BU of 3n4n by Molmil
Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-one
分子名称: 5'-D(*CP*GP*CP*GP*AP*A)-3', 5'-D(P*TP*TP*(B7C)P*GP*CP*G)-3'
著者Takenaka, A, Juan, E.C.M, Shimizu, S.
登録日2010-05-22
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res., 2010
6GO1
DownloadVisualize
BU of 6go1 by Molmil
Crystal Structure of a Bacillus anthracis peptidoglycan deacetylase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Polysaccharide deacetylase-like protein, ...
著者Giastas, P, Andreou, A, Eliopoulos, E.E.
登録日2018-06-01
公開日2019-04-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献The putative polysaccharide deacetylase Ba0331: cloning, expression, crystallization and structure determination.
Acta Crystallogr.,Sect.F, 75, 2019
3AIX
DownloadVisualize
BU of 3aix by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (I222)
分子名称: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
著者Kawai, A, Higuchi, S, Miyamoto, S.
登録日2010-05-18
公開日2011-05-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
3AIZ
DownloadVisualize
BU of 3aiz by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (P21212)
分子名称: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
著者Kawai, A, Higuchi, S, Miyamoto, S.
登録日2010-05-18
公開日2011-05-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
4V33
DownloadVisualize
BU of 4v33 by Molmil
Crystal structure of the putative polysaccharide deacetylase BA0330 from bacillus anthracis
分子名称: 1,2-ETHANEDIOL, ACETATE ION, POLYSACCHARIDE DEACETYLASE-LIKE PROTEIN, ...
著者Giastas, P, Andreou, A, Bouriotis, V, Eliopoulos, E.
登録日2014-10-16
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Two Putative Polysaccharide Deacetylases are Required for Osmotic Stability and Cell Shape Maintenance in Bacillus Anthracis.
J.Biol.Chem., 290, 2015
1I3T
DownloadVisualize
BU of 1i3t by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3', MAGNESIUM ION
著者Hossain, M.T, Hikima, T, Chatake, T, Masaru, T, Sunami, T, Ueno, Y, Matsuda, A, Takenaka, A.
登録日2001-02-16
公開日2001-09-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex.
J.Biochem.(Tokyo), 130, 2001
4ZBY
DownloadVisualize
BU of 4zby by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (uracil complex form)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, URACIL, ...
著者Kawai, A, Miyamoto, S.
登録日2015-04-15
公開日2015-09-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBX
DownloadVisualize
BU of 4zbx by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=0.9000)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, Uracil-DNA glycosylase
著者Kawai, A, Miyamoto, S.
登録日2015-04-15
公開日2015-09-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBZ
DownloadVisualize
BU of 4zbz by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=1.5418)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Kawai, A, Miyamoto, S.
登録日2015-04-15
公開日2015-09-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
3B1B
DownloadVisualize
BU of 3b1b by Molmil
The unique structure of wild type carbonic anhydrase alpha-CA1 from Chlamydomonas reinhardtii
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Carbonic anhydrase 1, SULFATE ION, ...
著者Shimizu, S, Takenaka, A.
登録日2011-06-29
公開日2011-11-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The unique structure of carbonic anhydrase alpha CA1 from Chlamydomonas reinhardtii
Acta Crystallogr.,Sect.D, 67, 2011
2YZ7
DownloadVisualize
BU of 2yz7 by Molmil
X-ray analyses of 3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis
分子名称: CALCIUM ION, CHLORIDE ION, D-3-hydroxybutyrate dehydrogenase
著者Hoque, M.M, Juan, E.C.M, Shimizu, S, Hossain, M.T, Takenaka, A.
登録日2007-05-04
公開日2008-04-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The structures of Alcaligenes faecalisD-3-hydroxybutyrate dehydrogenase before and after NAD(+) and acetate binding suggest a dynamical reaction mechanism as a member of the SDR family.
Acta Crystallogr.,Sect.D, 64, 2008

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon