Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3AYV
DownloadVisualize
BU of 3ayv by Molmil
TTHB071 protein from Thermus thermophilus HB8 soaking with ZnCl2
分子名称: Putative uncharacterized protein TTHB071, ZINC ION
著者Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-05-17
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3B0Y
DownloadVisualize
BU of 3b0y by Molmil
K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0X
DownloadVisualize
BU of 3b0x by Molmil
K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2YYB
DownloadVisualize
BU of 2yyb by Molmil
Crystal structure of TTHA1606 from Thermus thermophilus HB8
分子名称: Hypothetical protein TTHA1606
著者Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-28
公開日2008-05-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
1WJ9
DownloadVisualize
BU of 1wj9 by Molmil
Crystal structure of a CRISPR-associated protein from thermus thermophilus
分子名称: CRISPR-associated protein
著者Ebihara, A, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain
Protein Sci., 15, 2006
4HDV
DownloadVisualize
BU of 4hdv by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2,6-diaminopurine
分子名称: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(1AP)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
著者Tubbs, J.L, Tainer, J.A.
登録日2012-10-02
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
4HDU
DownloadVisualize
BU of 4hdu by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2-aminopurine
分子名称: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(2PR)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
著者Tubbs, J.L, Tainer, J.A.
登録日2012-10-02
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.848 Å)
主引用文献Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
7WRR
DownloadVisualize
BU of 7wrr by Molmil
X-ray structure of Thermus thermophilus HB8 transketorase in complex with TPP and MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
7WRT
DownloadVisualize
BU of 7wrt by Molmil
X-ray structure ofThermus thermophilus HB8 transketorase demonstrate in complex with TPP and D-erythrose-4-phosphate
分子名称: CALCIUM ION, ERYTHOSE-4-PHOSPHATE, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
2GGQ
DownloadVisualize
BU of 2ggq by Molmil
complex of hypothetical glucose-1-phosphate thymidylyltransferase from sulfolobus tokodaii
分子名称: 401aa long hypothetical glucose-1-phosphate thymidylyltransferase, IODIDE ION, THYMIDINE-5'-TRIPHOSPHATE
著者Rajakannan, V, Mizushima, T, Suzuki, A, Masui, R, Kuramitsu, S, Yamane, T.
登録日2006-03-24
公開日2007-03-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献complex of hypothetical glucose-1-phosphate thymidylyltransferase from sulfolobus tokodaii
To be published
1GC3
DownloadVisualize
BU of 1gc3 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH TRYPTOPHAN
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-07-18
公開日2001-09-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1GC4
DownloadVisualize
BU of 1gc4 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH ASPARTATE
分子名称: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-07-19
公開日2001-09-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1GCK
DownloadVisualize
BU of 1gck by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1 COMPLEXED WITH ASPARTATE
分子名称: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-08-04
公開日2001-11-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
2DBQ
DownloadVisualize
BU of 2dbq by Molmil
Crystal Structure of Glyoxylate Reductase (PH0597) from Pyrococcus horikoshii OT3, Complexed with NADP (I41)
分子名称: GLYCEROL, Glyoxylate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Yoshikawa, S, Arai, R, Kinoshita, Y, Uchikubo-Kamo, T, Akasaka, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-16
公開日2006-06-16
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.
Acta Crystallogr.,Sect.D, 63, 2007
2DBZ
DownloadVisualize
BU of 2dbz by Molmil
Crystal Structure of Glyoxylate Reductase (PH0597) from Pyrococcus horikoshii OT3, Complexed with NADP (P61)
分子名称: Glyoxylate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Yoshikawa, S, Arai, R, Kinoshita, Y, Uchikubo-Kamo, T, Akasaka, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-16
公開日2006-06-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.
Acta Crystallogr.,Sect.D, 63, 2007
2DBR
DownloadVisualize
BU of 2dbr by Molmil
Crystal Structure of Glyoxylate Reductase (PH0597) from Pyrococcus horikoshii OT3, Complexed with NADP (P1)
分子名称: Glyoxylate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Yoshikawa, S, Arai, R, Kinoshita, Y, Uchikubo-Kamo, T, Akasaka, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-16
公開日2006-06-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.
Acta Crystallogr.,Sect.D, 63, 2007
1WM9
DownloadVisualize
BU of 1wm9 by Molmil
Structure of GTP cyclohydrolase I from Thermus thermophilus HB8
分子名称: GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-05
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel Reaction Mechanism of GTP Cyclohydrolase I. High-Resolution X-Ray Crystallography of Thermus thermophilus HB8 Enzyme Complexed with a Transition State Analogue, the 8-Oxoguanine Derivative.
J.Biochem.(Tokyo), 138, 2005
3VPC
DownloadVisualize
BU of 3vpc by Molmil
ArgX from Sulfolobus tokodaii complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Putative acetylornithine deacetylase
著者Tomita, T, Horie, A, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
3VPB
DownloadVisualize
BU of 3vpb by Molmil
ArgX from Sulfolobus tokodaii complexed with LysW/Glu/ADP/Mg/Zn/Sulfate
分子名称: ADENOSINE-5'-DIPHOSPHATE, Alpha-aminoadipate carrier protein lysW, GLUTAMIC ACID, ...
著者Tomita, T, Ouchi, T, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus
Nat.Chem.Biol., 9, 2013
3VPD
DownloadVisualize
BU of 3vpd by Molmil
LysX from Thermus thermophilus complexed with AMP-PNP
分子名称: CITRIC ACID, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribosomal protein S6 modification protein, ...
著者Tomita, T, Ouchi, T, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
2GGO
DownloadVisualize
BU of 2ggo by Molmil
Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii
分子名称: 401aa long hypothetical glucose-1-phosphate thymidylyltransferase
著者Rajakannan, V, Mizushima, T, Suzuki, A, Masui, R, Kuramitsu, S, Yamane, T.
登録日2006-03-24
公開日2007-03-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii
To be published
1IZ0
DownloadVisualize
BU of 1iz0 by Molmil
Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: QUINONE OXIDOREDUCTASE, SULFATE ION
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003
1IYZ
DownloadVisualize
BU of 1iyz by Molmil
Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon