Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3VNV
DownloadVisualize
BU of 3vnv by Molmil
Complex structure of viral RNA polymerase II
分子名称: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
著者Takeshita, D, Tomita, K.
登録日2012-01-18
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3WFQ
DownloadVisualize
BU of 3wfq by Molmil
tRNA processing enzyme complex 1
分子名称: Poly A polymerase, RNA (73-MER)
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.619 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
2Z3K
DownloadVisualize
BU of 2z3k by Molmil
complex structure of LF-transferase and rAF
分子名称: 2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, ...
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3M
DownloadVisualize
BU of 2z3m by Molmil
complex structure of LF-transferase and dAF
分子名称: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, ...
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3L
DownloadVisualize
BU of 2z3l by Molmil
complex structure of LF-transferase and peptide A
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3P
DownloadVisualize
BU of 2z3p by Molmil
complex structure of LF-transferase and leucine
分子名称: D(-)-TARTARIC ACID, LEUCINE, Leucyl/phenylalanyl-tRNA-protein transferase
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3O
DownloadVisualize
BU of 2z3o by Molmil
complex structure of LF-transferase and phenylalanine
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, PHENYLALANINE
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3N
DownloadVisualize
BU of 2z3n by Molmil
complex structure of LF-transferase and peptide B
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
6IW6
DownloadVisualize
BU of 6iw6 by Molmil
Crystal structure of the Lin28-interacting module of human TUT4
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Terminal uridylyltransferase 4,Terminal uridylyltransferase 4, ...
著者Yamashita, S, Tomita, K.
登録日2018-12-04
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Crystal structure of the Lin28-interacting module of human terminal uridylyltransferase that regulates let-7 expression.
Nat Commun, 10, 2019
2ZHB
DownloadVisualize
BU of 2zhb by Molmil
Complex structure of AFCCA with tRNAminiDUC
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH5
DownloadVisualize
BU of 2zh5 by Molmil
Complex structure of AFCCA with tRNAminiDCU
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH1
DownloadVisualize
BU of 2zh1 by Molmil
Complex structure of AFCCA with tRNAminiDA
分子名称: CCA-adding enzyme, RNA (33-MER), SULFATE ION
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH8
DownloadVisualize
BU of 2zh8 by Molmil
Complex structure of AFCCA with tRNAminiDGC
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZHA
DownloadVisualize
BU of 2zha by Molmil
Complex structure of AFCCA with tRNAminiDU and CTP
分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH9
DownloadVisualize
BU of 2zh9 by Molmil
Complex structure of AFCCA with tRNAminiDU
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH2
DownloadVisualize
BU of 2zh2 by Molmil
Complex structure of AFCCA with tRNAminiDAC
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH7
DownloadVisualize
BU of 2zh7 by Molmil
Complex structure of AFCCA with tRNAminiDG
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH3
DownloadVisualize
BU of 2zh3 by Molmil
Complex structure of AFCCA with tRNAminiDCA
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH6
DownloadVisualize
BU of 2zh6 by Molmil
Complex structure of AFCCA with tRNAminiDCU and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ...
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH4
DownloadVisualize
BU of 2zh4 by Molmil
Complex structure of AFCCA with tRNAminiDCG
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Toh, Y, Tomita, K.
登録日2008-02-01
公開日2008-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
3AGP
DownloadVisualize
BU of 3agp by Molmil
Structure of viral polymerase form I
分子名称: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
著者Takeshita, D, Tomita, K.
登録日2010-04-06
公開日2010-09-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Assembly of Q{beta} viral RNA polymerase with host translational elongation factors EF-Tu and -Ts
Proc.Natl.Acad.Sci.USA, 107, 2010
3AGQ
DownloadVisualize
BU of 3agq by Molmil
Structure of viral polymerase form II
分子名称: Elongation factor Ts, Elongation factor Tu 1, LINKER, ...
著者Takeshita, D, Tomita, K.
登録日2010-04-06
公開日2010-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Assembly of Q{beta} viral RNA polymerase with host translational elongation factors EF-Tu and -Ts
Proc.Natl.Acad.Sci.USA, 107, 2010
413D
DownloadVisualize
BU of 413d by Molmil
A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC)
分子名称: RNA (5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3')
著者Tanaka, Y, Fujii, S, Hiroaki, H, Sakata, T, Tanaka, T, Uesugi, S, Tomita, K.-I, Kyogoku, Y.
登録日1998-07-10
公開日1998-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A'-form RNA double helix in the single crystal structure of r(UGAGCUUCGGCUC).
Nucleic Acids Res., 27, 1999
1RLS
DownloadVisualize
BU of 1rls by Molmil
CRYSTAL STRUCTURE OF RNASE T1 COMPLEXED WITH THE PRODUCT NUCLEOTIDE 3'-GMP. STRUCTURAL EVIDENCE FOR DIRECT INTERACTION OF HISTIDINE 40 AND GLUTAMIC ACID 58 WITH THE 2'-HYDROXYL GROUP OF RIBOSE
分子名称: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE T1
著者Gohda, K, Oka, K.-I, Tomita, K.-I, Hakoshima, T.
登録日1994-03-29
公開日1994-12-20
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of RNase T1 complexed with the product nucleotide 3'-GMP. Structural evidence for direct interaction of histidine 40 and glutamic acid 58 with the 2'-hydroxyl group of the ribose.
J.Biol.Chem., 269, 1994
1UEU
DownloadVisualize
BU of 1ueu by Molmil
Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure
分子名称: ACETATE ION, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-21
公開日2003-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure.
Embo J., 22, 2003

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon