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7JR5
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BU of 7jr5 by Molmil
Real Time Reaction Intermediates in Stigmatella Bacteriophytochrome P2
分子名称: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
著者Schmidt, M.
登録日2020-08-11
公開日2021-10-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献High-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Structure, 29, 2021
6PTX
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BU of 6ptx by Molmil
Dark, 100K, PCM Myxobacterial Phytochrome, P2, Wild Type,
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
著者Pandey, S, Schmidt, M, Stojkovic, E.A.
登録日2019-07-16
公開日2019-10-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
4X8Y
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BU of 4x8y by Molmil
Crystal structure of human PGRMC1 cytochrome b5-like domain
分子名称: Membrane-associated progesterone receptor component 1, PROTOPORPHYRIN IX CONTAINING FE
著者Nakane, T, Yamamoto, T, Shimamura, T, Kobayashi, T, Kabe, Y, Suematsu, M.
登録日2014-12-11
公開日2016-03-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance
Nat Commun, 7, 2016
2RQP
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BU of 2rqp by Molmil
The Solution Structure of Heterochromatin Protein 1-Binding Protein 74 Histone H1 like domain
分子名称: Heterochromatin protein 1-binding protein 3
著者Shimamoto, S, Sugahara, H, Ohkubo, T.
登録日2009-09-04
公開日2009-12-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The middle region of an HP1-binding protein, HP1-BP74, associates with linker DNA at the entry/exit site of nucleosomal DNA
J.Biol.Chem., 285, 2010
4DBG
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BU of 4dbg by Molmil
Crystal structure of HOIL-1L-UBL complexed with a HOIP-UBA derivative
分子名称: RING finger protein 31, RanBP-type and C3HC4-type zinc finger-containing protein 1
著者Yagi, H, Hiromoto, T, Mizushima, T, Kurimoto, E, Kato, K.
登録日2012-01-15
公開日2012-04-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献A non-canonical UBA-UBL interaction forms the linear-ubiquitin-chain assembly complex
Embo Rep., 13, 2012
3WSV
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BU of 3wsv by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-unbound form
分子名称: GLYCEROL, L-lactate dehydrogenase
著者Matoba, Y, Sugiyama, M.
登録日2014-03-27
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3AFC
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BU of 3afc by Molmil
Mouse Semaphorin 6A extracellular domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin-6A
著者Yasui, N, Nogi, T, Mihara, E, Takagi, J.
登録日2010-02-26
公開日2010-10-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
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BU of 3al8 by Molmil
Plexin A2 / Semaphorin 6A complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2, ...
著者Nogi, T, Yasui, N, Mihara, E, Takagi, J.
登録日2010-07-28
公開日2010-10-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL9
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BU of 3al9 by Molmil
Mouse Plexin A2 extracellular domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2
著者Nogi, T, Yasui, N, Mihara, E, Takagi, J.
登録日2010-07-28
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3WA7
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BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
3WCK
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BU of 3wck by Molmil
Crystal structure of monomeric photosensitizing fluorescent protein, Supernova
分子名称: Monomeric photosenitizing fluorescent protein supernova
著者Sakai, N, Matsuda, T, Takemoto, K, Nagai, T.
登録日2013-05-27
公開日2013-10-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation
Sci Rep, 3, 2013
5DSV
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BU of 5dsv by Molmil
Crystal structure of human proteasome alpha7 tetradecamer
分子名称: Proteasome subunit alpha type-3
著者Satoh, T, Thammaporn, R, Seetaha, S, Kato, K.
登録日2015-09-17
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Disassembly of the self-assembled, double-ring structure of proteasome alpha 7 homo-tetradecamer by alpha 6
Sci Rep, 5, 2015
5Z30
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BU of 5z30 by Molmil
The crystal structure of the nucleosome containing a cancer-associated histone H2A.Z R80C mutant
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A.Z, ...
著者Horikoshi, N, Arimura, Y, Kurumizaka, H.
登録日2018-01-05
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Cancer-associated mutations of histones H2B, H3.1 and H2A.Z.1 affect the structure and stability of the nucleosome.
Nucleic Acids Res., 46, 2018
5B1H
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BU of 5b1h by Molmil
Crystal structure of cystathionine beta-synthase from Lactobacillus plantarum
分子名称: Cystathionine beta-synthase, GLYCEROL, SULFATE ION
著者Matoba, Y, Sugiyama, M.
登録日2015-12-04
公開日2016-12-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
3AZO
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BU of 3azo by Molmil
Crystal structure of puromycin hydrolase
分子名称: Aminopeptidase, SULFATE ION
著者Matoba, Y, Sugiyama, M.
登録日2011-05-27
公開日2011-07-27
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural evidence that puromycin hydrolase is a new type of aminopeptidase with a prolyl oligopeptidase family fold
Proteins, 79, 2011
3AZP
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BU of 3azp by Molmil
Crystal structure of puromycin hydrolase S511A mutant
分子名称: Aminopeptidase, SULFATE ION
著者Matoba, Y, Sugiyama, M.
登録日2011-05-27
公開日2011-07-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural evidence that puromycin hydrolase is a new type of aminopeptidase with a prolyl oligopeptidase family fold
Proteins, 79, 2011
3AZQ
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BU of 3azq by Molmil
Crystal structure of puromycin hydrolase S511A mutant complexed with PGG
分子名称: Aminopeptidase, SULFATE ION, tripeptide PGG
著者Matoba, Y, Sugiyama, M.
登録日2011-05-27
公開日2011-07-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural evidence that puromycin hydrolase is a new type of aminopeptidase with a prolyl oligopeptidase family fold
Proteins, 79, 2011
3AWT
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BU of 3awt by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 20 hr: occupancy of Cu(II) is high
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWY
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BU of 3awy by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie M84L mutant soaked in a Cu(II)-containing solution for 80 hr
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWW
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BU of 3aww by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 80 hr: occupancy of CuA is high
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWV
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BU of 3awv by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 80 hr: occupancy of CuA is low
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWS
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BU of 3aws by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 20 hr: occupancy of Cu(II) is low
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AX0
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BU of 3ax0 by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie Y98F mutant soaked in a Cu(II)-containing solution for 80 hr
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWZ
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BU of 3awz by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie H97Q mutant soaked in a Cu(II)-containing solution for 80 hr
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWU
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BU of 3awu by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 40 h
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011

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