Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7WDO
DownloadVisualize
BU of 7wdo by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDR
DownloadVisualize
BU of 7wdr by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDP
DownloadVisualize
BU of 7wdp by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDS
DownloadVisualize
BU of 7wds by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-xylopyranose
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDV
DownloadVisualize
BU of 7wdv by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7CP7
DownloadVisualize
BU of 7cp7 by Molmil
Crystal structure of FqzB, native proteins
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020
7CP6
DownloadVisualize
BU of 7cp6 by Molmil
Crystal structure of FqzB
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase, ...
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2021-01-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020
7WDN
DownloadVisualize
BU of 7wdn by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: alpha-D-glucopyranose, beta-glucosidase
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2023-01-04
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides.
Appl.Microbiol.Biotechnol., 106, 2022
3APB
DownloadVisualize
BU of 3apb by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with iodide
分子名称: Galectin-8, IODIDE ION
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-14
公開日2011-01-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
To be Published
3AP5
DownloadVisualize
BU of 3ap5 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain
分子名称: Galectin-8
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-11
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP6
DownloadVisualize
BU of 3ap6 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose 3'-sulfate
分子名称: Galectin-8, SULFATE ION, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-12
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP4
DownloadVisualize
BU of 3ap4 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose
分子名称: Galectin-8, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-11
公開日2011-01-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
5YQS
DownloadVisualize
BU of 5yqs by Molmil
Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yaoi, K, Matsuzawa, T, Watanabe, M, Nakamichi, Y.
登録日2017-11-07
公開日2018-11-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme.
J.Struct.Biol., 205, 2019
3AP7
DownloadVisualize
BU of 3ap7 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose sialic acid
分子名称: CHLORIDE ION, Galectin-8, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-12
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP9
DownloadVisualize
BU of 3ap9 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with Lacto-N-fucopentaose III
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Galectin-8, ...
著者Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3VN9
DownloadVisualize
BU of 3vn9 by Molmil
Rifined Crystal structure of non-phosphorylated MAP2K6 in a putative auto-inhibition state
分子名称: 9-{5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-beta-L-ribofuranosyl}-9H-purin-6-amine, Dual specificity mitogen-activated protein kinase kinase 6, MAGNESIUM ION
著者Kinoshita, T, Matsuzaka, H, Nakai, R, Kirii, Y, Yokota, K, Tada, T, Matsumoto, T.
登録日2012-01-05
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of non-phosphorylated MAP2K6 in a putative auto-inhibition state
J.Biochem., 151, 2012
3WVQ
DownloadVisualize
BU of 3wvq by Molmil
Structure of ATP grasp protein
分子名称: GLYCEROL, PGM1, SULFATE ION
著者Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
登録日2014-06-04
公開日2014-11-19
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3WVR
DownloadVisualize
BU of 3wvr by Molmil
Structure of ATP grasp protein with AMP
分子名称: ADENOSINE MONOPHOSPHATE, GLYCEROL, PGM1, ...
著者Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
登録日2014-06-04
公開日2014-11-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.175 Å)
主引用文献A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3VOA
DownloadVisualize
BU of 3voa by Molmil
Staphylococcus aureus FtsZ 12-316 GDP-form
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Yamane, J, Matsui, T, Mogi, N, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VOB
DownloadVisualize
BU of 3vob by Molmil
Staphylococcus aureus FtsZ with PC190723
分子名称: 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Yamane, J, Matsui, T, Mogi, N, Yamaguchi, H, Takemoto, H, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3WGM
DownloadVisualize
BU of 3wgm by Molmil
STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAN bound with GTP, DeltaT7GAN-GTP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3WGL
DownloadVisualize
BU of 3wgl by Molmil
STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAN bound with GDP, DeltaT7GAN-GDP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.066 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3WGK
DownloadVisualize
BU of 3wgk by Molmil
STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAG, DeltaT7GAG-GDP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
2EIH
DownloadVisualize
BU of 2eih by Molmil
Crystal Structure of NAD-dependent alcohol dehydrogenase
分子名称: Alcohol dehydrogenase, ZINC ION
著者Kamiya, N, Hikima, T, Matsu, T, Maoka, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-13
公開日2008-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure analysis of putative NAD-dependent alcohol dehydrogenase from Thermus thermophilus HB8
To be published
1S2H
DownloadVisualize
BU of 1s2h by Molmil
The Mad2 spindle checkpoint protein possesses two distinct natively folded states
分子名称: Mitotic spindle assembly checkpoint protein MAD2A
著者Luo, X, Tang, Z, Xia, G, Wassmann, K, Matsumoto, T, Rizo, J, Yu, H.
登録日2004-01-08
公開日2004-03-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The Mad2 spindle checkpoint protein has two distinct natively folded states.
Nat.Struct.Mol.Biol., 11, 2004

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon