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5MDU
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BU of 5mdu by Molmil
Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe.
分子名称: CHLORIDE ION, GLYCEROL, Rpb7-binding protein seb1, ...
著者Wittmann, S, Renner, M, El Omari, K, Adams, O, Vasiljeva, L, Grimes, J.
登録日2016-11-13
公開日2017-04-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
5MDT
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BU of 5mdt by Molmil
Structure of the CTD-interacting domain (CID) of Seb1 from S. pombe.
分子名称: Rpb7-binding protein seb1
著者Wittmann, S, Renner, M, Vasiljeva, L, Grimes, J.
登録日2016-11-13
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
5NL4
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BU of 5nl4 by Molmil
Crystal structure of Zn1.3-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc acetate/1.3 mM E16V hUb
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Fermani, S, Falini, G.
登録日2017-04-04
公開日2017-04-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
5NMC
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BU of 5nmc by Molmil
Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 70 mM zinc acetate/20% v/v TFE/1.3 mM hUb
分子名称: ACETATE ION, Polyubiquitin-C, ZINC ION
著者Fermani, S, Falini, G.
登録日2017-04-05
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
5NLI
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BU of 5nli by Molmil
Crystal structure of Zn2-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc acetate/10% v/v TFE/1.3 mM E16V hUb
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Polyubiquitin-C, ...
著者Fermani, S, Falini, G.
登録日2017-04-04
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
5NL5
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BU of 5nl5 by Molmil
Crystal structure of Zn1.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc acetate/1.3 mM E16V hUb
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Polyubiquitin-B, ...
著者Fermani, S, Falini, G.
登録日2017-04-04
公開日2017-04-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
5NLF
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BU of 5nlf by Molmil
Crystal structure of Zn2.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 100 mM zinc acetate/1.3 mM E16V hUb
分子名称: ACETATE ION, Polyubiquitin-C, ZINC ION
著者Fermani, S, Falini, G.
登録日2017-04-04
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
7SWL
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BU of 7swl by Molmil
CryoEM structure of the N-terminal-deleted Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-20
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
5NLJ
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BU of 5nlj by Molmil
Crystal structure of Zn3-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc acetate/20% v/v TFE/1.3 mM E16V hUb
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Fermani, S, Falini, G.
登録日2017-04-04
公開日2017-04-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium.
Chemistry, 24, 2018
7T0V
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BU of 7t0v by Molmil
CryoEM structure of the crosslinked Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-30
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7T3I
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BU of 7t3i by Molmil
CryoEM structure of the Rix7 D2 Walker B mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, Rix7, ...
著者Kocaman, S, Stanley, R.E.
登録日2021-12-08
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
5NUI
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BU of 5nui by Molmil
Crystal structure of SIVmac239 Nef in an ExxxLM endocytic sorting motif bound state
分子名称: Protein Nef, SER-GLN-ILE-LYS-ARG-LEU-LEU-SER
著者Manrique, S, Horenkamp, F.A, Anand, K, Geyer, M.
登録日2017-04-30
公開日2017-08-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Endocytic sorting motif interactions involved in Nef-mediated downmodulation of CD4 and CD3.
Nat Commun, 8, 2017
7Z0J
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BU of 7z0j by Molmil
human PEX13 SH3 domain in complex with internal FxxxF motif
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13
著者Gaussmann, S, Zak, K, Kreisz, N, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7Z0K
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BU of 7z0k by Molmil
human PEX13 SH3 in complex with PEX5 W4 (WxxxF/Y) motif
分子名称: Peroxisomal membrane protein PEX13,Peroxisomal targeting signal 1 receptor
著者Gaussmann, S, Napolitano, V, sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7Z0I
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BU of 7z0i by Molmil
human PEX13 SH3 domain
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13, ZINC ION
著者Gaussmann, S, Zak, K, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
6AIE
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BU of 6aie by Molmil
Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
分子名称: Putative methyltransferase
著者Venkataraman, S, Dhankar, A, Sinha, K.M, Manivasakan, P, Iqbal, N, Singh, T.P, Prasad, B.V.L.S.
登録日2018-08-22
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
To Be Published
4BPF
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BU of 4bpf by Molmil
High resolution crystal structure of Bacillus subtilis DltC S36A
分子名称: D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2
著者Zimmermann, S, Neumann, P, Stubbs, M.T.
登録日2013-05-26
公開日2014-06-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015
4BPH
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BU of 4bph by Molmil
High resolution crystal structure of Bacillus subtilis DltC
分子名称: 4'-PHOSPHOPANTETHEINE, D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2, MAGNESIUM ION
著者Zimmermann, S, Neumann, P, Stubbs, M.T.
登録日2013-05-26
公開日2014-06-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015
3CJI
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BU of 3cji by Molmil
Structure of Seneca Valley Virus-001
分子名称: CALCIUM ION, Polyprotein
著者Venkataraman, S, Reddy, V.S.
登録日2008-03-13
公開日2008-12-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Seneca Valley Virus-001: an oncolytic picornavirus representing a new genus
Structure, 16, 2008
3EYD
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BU of 3eyd by Molmil
Structure of HCV NS3-4A Protease with an Inhibitor Derived from a Boronic Acid
分子名称: HCV NS3, HCV NS4a peptide, ZINC ION, ...
著者Venkatraman, S, Wu, W, Prongay, A.J, Girijavallabhan, V, Njoroge, F.G.
登録日2008-10-20
公開日2009-02-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Potent inhibitors of HCV-NS3 protease derived from boronic acids.
Bioorg.Med.Chem.Lett., 19, 2009
4IED
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BU of 4ied by Molmil
Crystal Structure of FUS-1 (OXA-85), a Class D beta-lactamase from Fusobacterium nucleatum subsp. polymorphum
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Class D beta-lactamase, ...
著者Mangani, S, Benvenuti, M, Docquier, J.D.
登録日2012-12-13
公開日2014-01-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of FUS-1 (OXA-85), a Class D beta-lactamase from Fusobacterium nucleatum subsp. polymorphum
To be Published
6TVQ
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BU of 6tvq by Molmil
Structure of native gp41 derived peptide fusion inhibitor
分子名称: Env polyprotein (Fragment), Envelope glycoprotein gp160
著者Huhmann, S, Nyakatura, E.K, Rohrhofer, A, Schmidt, B, Eichler, J, Moschner, J, Roth, C.
登録日2020-01-10
公開日2021-01-27
最終更新日2023-07-19
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Systematic Evaluation of Fluorination as Modification for Peptide-Based Fusion Inhibitors against HIV-1 Infection.
Chembiochem, 22, 2021
6TVU
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BU of 6tvu by Molmil
Structure of native gp41 derived peptide fusion inhibitor
分子名称: Env polyprotein (Fragment), Transmembrane protein gp41
著者Huhmann, S, Nyakatura, E.K, Rohrhofer, A, Schmidt, B, Eichler, J, Moschner, J, Roth, C, Koksch, B.
登録日2020-01-10
公開日2021-01-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Systematic Evaluation of Fluorination as Modification for Peptide-Based Fusion Inhibitors against HIV-1 Infection.
Chembiochem, 22, 2021
6TVW
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BU of 6tvw by Molmil
Structure of native gp41 derived peptide fusion inhibitor
分子名称: Envelope glycoprotein, Transmembrane protein gp41,Envelope glycoprotein gp160
著者Huhmann, S, Nyakatura, E.K, Rohrhofer, A, Schmidt, B, Eichler, J, Moschner, J, Roth, C, Koksch, B.
登録日2020-01-10
公開日2021-01-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Systematic Evaluation of Fluorination as Modification for Peptide-Based Fusion Inhibitors against HIV-1 Infection.
Chembiochem, 22, 2021
8Q4E
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BU of 8q4e by Molmil
Structure of Legionella pneumophila Lcl C-terminal domain
分子名称: HbP1
著者Rehman, S, Garnett, J.A.
登録日2023-08-06
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Legionella collagen-like protein employs a unique binding mechanism for the recognition of host glycosaminoglycans.
Biorxiv, 2023

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