Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8K10
DownloadVisualize
BU of 8k10 by Molmil
SID1 transmembrane family member 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 2
著者Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
登録日2023-07-10
公開日2024-07-10
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
8K13
DownloadVisualize
BU of 8k13 by Molmil
SID1 transmembrane family member 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 1
著者Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
登録日2023-07-10
公開日2024-07-10
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
8K1D
DownloadVisualize
BU of 8k1d by Molmil
SID1 transmembrane family member 1
分子名称: SID1 transmembrane family member 1
著者Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
登録日2023-07-10
公開日2024-07-10
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
8YHS
DownloadVisualize
BU of 8yhs by Molmil
The Crystal Structure of BRDT from Biortus.
分子名称: 1,2-ETHANEDIOL, 2,4-dimethyl-6-[6-(oxan-4-yl)-1-[(1~{S})-1-phenylethyl]imidazo[4,5-c]pyridin-2-yl]pyridazin-3-one, Bromodomain testis-specific protein
著者Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
登録日2024-02-28
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of BRDT from Biortus.
To Be Published
8U8P
DownloadVisualize
BU of 8u8p by Molmil
S292F Streptomyces coelicolor Laccase
分子名称: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
著者Wang, J.-X, Lu, Y.
登録日2023-09-18
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8Q
DownloadVisualize
BU of 8u8q by Molmil
V290N/S292F Streptomyces coelicolor Laccase
分子名称: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
著者Wang, J.-X, Lu, Y.
登録日2023-09-18
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8T
DownloadVisualize
BU of 8u8t by Molmil
Y229F/V290N Streptomyces coelicolor Laccase
分子名称: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
著者Wang, J.-X, Lu, Y.
登録日2023-09-18
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8R
DownloadVisualize
BU of 8u8r by Molmil
Y229F/V290N/S292F Streptomyces coelicolor Laccase
分子名称: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
著者Wang, J.-X, Lu, Y.
登録日2023-09-18
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8S
DownloadVisualize
BU of 8u8s by Molmil
Y229F/S292F Streptomyces coelicolor Laccase
分子名称: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
著者Wang, J.-X, Lu, Y.
登録日2023-09-18
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
5VNU
DownloadVisualize
BU of 5vnu by Molmil
Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Mn-bound FeBMb
分子名称: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Reed, J, Shi, Y, Zhu, Q, Chakraborty, S, Mirs, E.N, Petrik, I.D, Bhagi-Damodaran, A, Ross, M, Moenne-Loccoz, P, Zhang, Y, Lu, Y.
登録日2017-05-01
公開日2017-08-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.584 Å)
主引用文献Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.
J. Am. Chem. Soc., 139, 2017
5VFP
DownloadVisualize
BU of 5vfp by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFR
DownloadVisualize
BU of 5vfr by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFU
DownloadVisualize
BU of 5vfu by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFS
DownloadVisualize
BU of 5vfs by Molmil
Nucleotide-Driven Triple-State Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFT
DownloadVisualize
BU of 5vft by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFQ
DownloadVisualize
BU of 5vfq by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFO
DownloadVisualize
BU of 5vfo by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-08
公開日2018-07-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VRT
DownloadVisualize
BU of 5vrt by Molmil
Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Co-bound FeBMb
分子名称: COBALT (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Reed, J, Shi, Y, Zhu, Q, Chakraborty, S, Mirs, E.N, Petrik, I.D, Bhagi-Damodaran, A, Ross, M, Moenne-Loccoz, P, Zhang, Y, Lu, Y.
登録日2017-05-11
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.
J. Am. Chem. Soc., 139, 2017
6D45
DownloadVisualize
BU of 6d45 by Molmil
L89S Mutant of FeBMb Sperm Whale Myoglobin
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Bhagi-Damodaran, A, Mirts, E.N, Sandoval, B, Lu, Y.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.779 Å)
主引用文献Heme redox potentials hold the key to reactivity differences between nitric oxide reductase and heme-copper oxidase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1CC3
DownloadVisualize
BU of 1cc3 by Molmil
PURPLE CUA CENTER
分子名称: COPPER (II) ION, PROTEIN (CUA AZURIN)
著者Robinson, H, Ang, M.C, Gao, Y.-G, Hay, M.T, Lu, Y, Wang, A.H.-J.
登録日1999-03-03
公開日1999-12-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of electron transfer modulation in the purple CuA center.
Biochemistry, 38, 1999
8EKO
DownloadVisualize
BU of 8eko by Molmil
Sperm whale myoglobin mutant L29H F33W F43H (F33W CuBMb)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Ledray, A.P, Dwaraknath, S, Lu, Y.
登録日2022-09-21
公開日2022-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Tryptophan Can Promote Oxygen Reduction to Water in a Biosynthetic Model of Heme Copper Oxidases.
Biochemistry, 62, 2023
3M38
DownloadVisualize
BU of 3m38 by Molmil
The roles of Glutamates and Metal ions in a rationally designed nitric oxide reductase based on myoglobin: I107E FeBMb (No metal ion binding to FeB site)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
4TYX
DownloadVisualize
BU of 4tyx by Molmil
Structure of aquoferric sperm whale myoglobin L29H/F33Y/F43H/S92A mutant
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Bhagi-Damodaran, A, Petrik, I.D, Robinson, H, Lu, Y.
登録日2014-07-09
公開日2014-08-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Systematic tuning of heme redox potentials and its effects on O2 reduction rates in a designed oxidase in myoglobin.
J.Am.Chem.Soc., 136, 2014
3M3B
DownloadVisualize
BU of 3m3b by Molmil
The roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin: Zn(II)-I107E FeBMb (Zn(II) binding to FeB site)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MN0
DownloadVisualize
BU of 3mn0 by Molmil
Introducing a 2-His-1-Glu Non-Heme Iron Center into Myoglobin confers Nitric Oxide Reductase activity: Cu(II)-CN-FeBMb(-His) form
分子名称: COPPER (II) ION, CYANIDE ION, Myoglobin, ...
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Lei, L, Robinson, H, Lu, Y.
登録日2010-04-20
公開日2010-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Introducing a 2-his-1-glu nonheme iron center into myoglobin confers nitric oxide reductase activity.
J.Am.Chem.Soc., 132, 2010

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon