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8G9X
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BU of 8g9x by Molmil
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Changela, A, Gorman, J, Kwong, P.D.
登録日2023-02-22
公開日2023-04-19
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Diverse Murine Vaccinations Reveal Distinct Antibody Classes to Target Fusion Peptide and Variation in Peptide Length to Improve HIV Neutralization.
J.Virol., 97, 2023
1C9S
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BU of 1c9s by Molmil
CRYSTAL STRUCTURE OF A COMPLEX OF TRP RNA-BINDING ATTENUATION PROTEIN WITH A 53-BASE SINGLE STRANDED RNA CONTAINING ELEVEN GAG TRIPLETS SEPARATED BY AU DINUCLEOTIDES
分子名称: SINGLE STRANDED RNA (55-MER), TRP RNA-BINDING ATTENUATION PROTEIN, TRYPTOPHAN
著者Antson, A.A, Dodson, E.J, Dodson, G.G, Greaves, R.B, Chen, X.-P, Gollnick, P.
登録日1999-08-03
公開日1999-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA.
Nature, 401, 1999
7YAA
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BU of 7yaa by Molmil
Crystal structure analysis of cp3 bound BCLxl
分子名称: Bcl-2-like protein 1, GLYCEROL, N-(2-acetamidoethyl)-4-(4-methanoyl-1,3-thiazol-2-yl)benzamide, ...
著者Li, F.W, Liu, C, Wu, C.L, Wu, D.L.
登録日2022-06-27
公開日2023-11-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Cyclic peptides discriminate BCL-2 and its clinical mutants from BCL-X L by engaging a single-residue discrepancy.
Nat Commun, 15, 2024
7Y90
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BU of 7y90 by Molmil
Crystal Structure Analysis of cp1 bound BCL2
分子名称: (2R)-3-[2-(aminomethyl)-3-azanyl-1-[4-[2-(2-chloranylethanoylamino)ethylcarbamoyl]phenyl]prop-1-enyl]sulfanyl-2-(carboxyamino)propanoic acid, Apoptosis regulator Bcl-2, cp1 peptide
著者Li, F.W.
登録日2022-06-24
公開日2023-11-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Cyclic peptides discriminate BCL-2 and its clinical mutants from BCL-X L by engaging a single-residue discrepancy.
Nat Commun, 15, 2024
7Y8D
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BU of 7y8d by Molmil
Crystal structure of cp1 bound BCLxl
分子名称: (2R)-3-[2-(aminomethyl)-3-azanyl-1-[4-[2-(2-chloranylethanoylamino)ethylcarbamoyl]phenyl]prop-1-enyl]sulfanyl-2-(carboxyamino)propanoic acid, Bcl-2-like protein 1, cp1 peptide
著者Li, F.W, Liu, C, Wu, C.L, Wu, D.L.
登録日2022-06-23
公開日2023-11-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cyclic peptides discriminate BCL-2 and its clinical mutants from BCL-X L by engaging a single-residue discrepancy.
Nat Commun, 15, 2024
7YA5
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BU of 7ya5 by Molmil
Crystal structure analysis of cp1 bound BCL2/G101V
分子名称: (2R)-3-[2-(aminomethyl)-3-azanyl-1-[4-[2-(2-chloranylethanoylamino)ethylcarbamoyl]phenyl]prop-1-enyl]sulfanyl-2-(carboxyamino)propanoic acid, Apoptosis regulator Bcl-2, cp1 peptide
著者Li, F.W, Liu, C, Wu, C.L, Wu, D.L.
登録日2022-06-27
公開日2023-11-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Cyclic peptides discriminate BCL-2 and its clinical mutants from BCL-X L by engaging a single-residue discrepancy.
Nat Commun, 15, 2024
7YB7
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BU of 7yb7 by Molmil
anti-apoptotic protein BCL-2-M12
分子名称: Apoptosis regulator Bcl-2,Bcl-2-like protein 1, N-(2-acetamidoethyl)-4-(4,5-dihydro-1,3-thiazol-2-yl)benzamide, cp2 peptide
著者Li, F.W, Liu, C, Wu, D.L.
登録日2022-06-29
公開日2023-11-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cyclic peptides discriminate BCL-2 and its clinical mutants from BCL-X L by engaging a single-residue discrepancy.
Nat Commun, 15, 2024
8ABV
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BU of 8abv by Molmil
Crystal structure of SpLdpA in complex with erythro-DGPD
分子名称: (1R,2S)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, (1S,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, GLYCEROL, ...
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.683 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ABT
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BU of 8abt by Molmil
Crystal structure of NaLdpA in complex with the product analog Resveratrol
分子名称: RESVERATROL, SULFATE ION, SnoaL-like domain-containing protein
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ABU
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BU of 8abu by Molmil
Crystal structure of NaLdpA mutant H97Q in complex with erythro-DGPD
分子名称: (1S,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, SnoaL-like domain-containing protein
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.661 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ABW
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BU of 8abw by Molmil
Crystal structure of SpLdpA in complex with threo-DGPD
分子名称: (1R,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, (1S,2S)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, SULFATE ION, ...
著者Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
登録日2022-07-04
公開日2023-02-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
5HD0
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BU of 5hd0 by Molmil
BACE-1 in complex with (7aR)-7a-(4-(3-cyanophenyl)thiophen-2-yl)-6-(5-fluoropyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium
分子名称: 3-{5-[(2E,4aR,7aR)-6-(5-fluoropyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile, Beta-secretase 1, L(+)-TARTARIC ACID
著者Orth, P.
登録日2016-01-04
公開日2016-03-16
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates.
J.Med.Chem., 59, 2016
5HDU
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BU of 5hdu by Molmil
BACE-1 incomplex with (7aR)-7a-(4-(3-cyanophenyl)thiophen-2-yl)-6-(5-fluoro-4-methoxypyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium
分子名称: 3-{5-[(2E,4aR,7aR)-6-(5-fluoro-4-methoxypyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile, Beta-secretase 1, L(+)-TARTARIC ACID
著者Orth, P.
登録日2016-01-05
公開日2016-03-16
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates.
J.Med.Chem., 59, 2016
5HDX
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BU of 5hdx by Molmil
BACE-1 in complex with (7aR)-7a-(5-cyanothiophen-2-yl)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium
分子名称: 5-[(2E,4aR,7aR)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophene-2-carbonitrile, Beta-secretase 1
著者Orth, P.
登録日2016-01-05
公開日2016-03-16
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates.
J.Med.Chem., 59, 2016
5HE4
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BU of 5he4 by Molmil
BACE-1 in complex with (4aR,7aS)-7a-(2,6-difluorophenyl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium
分子名称: (2E,4aR,7aS)-7a-(2,6-difluorophenyl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-2-imino-3-methyloctahydro-4H-pyrrolo[3,4-d]pyrimidin-4-one, Beta-secretase 1, L(+)-TARTARIC ACID
著者Orth, P.
登録日2016-01-05
公開日2016-03-16
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates.
J.Med.Chem., 59, 2016
6KRG
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BU of 6krg by Molmil
Crystal structure of sfGFP Y182TMSiPhe
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Sun, J.P, Wang, J.Y, Zhu, Z.L, He, Q.T, Xiao, P.
登録日2019-08-21
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献DeSiphering receptor core-induced and ligand-dependent conformational changes in arrestin via genetic encoded trimethylsilyl 1 H-NMR probe.
Nat Commun, 11, 2020
7AL0
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BU of 7al0 by Molmil
Crystal Structure of Heymonin, a Novel Frog-derived Peptide
分子名称: CHLORIDE ION, Heymonin
著者Kascakova, B, Prudnikova, T, Kuta Smatanova, I, Xu, X.
登録日2020-10-03
公開日2021-04-21
最終更新日2021-05-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization and functional analysis of cathelicidin-MH, a novel frog-derived peptide with anti-septicemic properties.
Elife, 10, 2021
8EBU
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BU of 8ebu by Molmil
XPC release from Core7-XPA-DNA (Cy5)
分子名称: DNA repair protein complementing XP-A cells, DNA repair protein complementing XP-C cells, DNA1, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBS
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BU of 8ebs by Molmil
Initial DNA-lesion (Cy5) binding by XPC and TFIIH
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBT
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BU of 8ebt by Molmil
XPA repositioning Core7 of TFIIH relative to XPC-DNA lesion (Cy5)
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBY
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BU of 8eby by Molmil
XPC release from Core7-XPA-DNA (AP)
分子名称: DNA, DNA repair protein complementing XP-A cells, DNA repair protein complementing XP-C cells, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBV
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BU of 8ebv by Molmil
Initial DNA-lesion (AP) binding by XPC and TFIIH complex 1
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBW
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BU of 8ebw by Molmil
Initial DNA-lesion (AP) binding by XPC and TFIIH complex2
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBX
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BU of 8ebx by Molmil
XPA repositioning Core7 of TFIIH relative to XPC-DNA lesion (AP)
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
7YGI
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BU of 7ygi by Molmil
Crystal structure of p53 DBD domain in complex with azurin
分子名称: Azurin, Cellular tumor antigen p53, PHOSPHATE ION, ...
著者Jiang, W.X, Zuo, J.Q, Hu, J.J, Chen, X.Q, Ma, L.X, Liu, Z, Xing, Q.
登録日2022-07-11
公開日2023-02-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of bacterial effector protein azurin targeting tumor suppressor p53 and inhibiting its ubiquitination.
Commun Biol, 6, 2023

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